{"id":"https://openalex.org/W2889103878","doi":"https://doi.org/10.1093/bioinformatics/bty768","title":"Robust prediction of clinical outcomes using cytometry data","display_name":"Robust prediction of clinical outcomes using cytometry data","publication_year":2018,"publication_date":"2018-08-30","ids":{"openalex":"https://openalex.org/W2889103878","doi":"https://doi.org/10.1093/bioinformatics/bty768","mag":"2889103878","pmid":"https://pubmed.ncbi.nlm.nih.gov/30169745"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/bty768","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty768","pdf_url":"https://watermark.silverchair.com/bty768.pdf?token=AQECAHi208BE49Ooan9kkhW_Ercy7Dm3ZL_9Cf3qfKAc485ysgAAAr0wggK5BgkqhkiG9w0BBwagggKqMIICpgIBADCCAp8GCSqGSIb3DQEHATAeBglghkgBZQMEAS4wEQQM0aXdxRnF2kmYfL-oAgEQgIICcOA2Xv01FSOl18NPg4JTp9lL7bKIfKDeY9mhE1vnLUxuJkdRgbETql2dj0WjTRwzI_-KDltPVZNjxloZgbqVDshYjad98XqK_n-7pMBASP3OEb_8LaS6py8Yrjs0-_ZYG68tAd3Z95QAOGTmMidA3zPerPTE6CvwhKLqyhgcpZxVu2QEkU1VbTo6gYMecUO1VKc9EY620yZPwum3sXsoG4aq3L3M5d0nj4FoeTSrvrs45dkkF0mEaeXRzndmjayxrziSaXX_Z_oyVmJ6Qkx96LX0O5rtybKU2mW2IB7BIYFFsc1OdOhSRgqLHXglKjJ9hgE5yLdjwf2GaovzsAsa0pTuUh1nzi3enFM2LBctWhdTudrcrZneai2FC6YwaugRq2Bq8SfXdqKKipFECkCx-C0Q0uUgA-Y9dglHn_lIZt6W2H8Lpq55ynkyRajN43syK5qu-KcgB-WLX0D1Mjpvut9pEwuXetN_n3Lv-lACjvaIqTyjLc2PtiwEIisdMDV9uNNRVuPIsKUTAVn6zoncjkTjcOpiZGbz-_Ju3bGQ3aRkvW7uxho_seZ3r9EO55X4sENQvSOUr--_jp4a5KmQr8odQxm_H8fqeYDig606jvqcEgRd6-4pxtM2GM_Nr96A-LwXHXMzviMKa2TYIKXLyjbwZ7x6wmkPs1_rj21Sj9Yb_uWKHz2Ei-Vn_M-sndCtqM8k17OzdEaYH1KxOKdOogYYNQY_2WqiigssAygABqhHqHKQppY5E8IwNLYehIOQULxNWx70u663uSogD9AEz4rIWfMbtGuPZsrvh5MXYhOlAm_hMoIyA9ppYK-MViJfmA","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://watermark.silverchair.com/bty768.pdf?token=AQECAHi208BE49Ooan9kkhW_Ercy7Dm3ZL_9Cf3qfKAc485ysgAAAr0wggK5BgkqhkiG9w0BBwagggKqMIICpgIBADCCAp8GCSqGSIb3DQEHATAeBglghkgBZQMEAS4wEQQM0aXdxRnF2kmYfL-oAgEQgIICcOA2Xv01FSOl18NPg4JTp9lL7bKIfKDeY9mhE1vnLUxuJkdRgbETql2dj0WjTRwzI_-KDltPVZNjxloZgbqVDshYjad98XqK_n-7pMBASP3OEb_8LaS6py8Yrjs0-_ZYG68tAd3Z95QAOGTmMidA3zPerPTE6CvwhKLqyhgcpZxVu2QEkU1VbTo6gYMecUO1VKc9EY620yZPwum3sXsoG4aq3L3M5d0nj4FoeTSrvrs45dkkF0mEaeXRzndmjayxrziSaXX_Z_oyVmJ6Qkx96LX0O5rtybKU2mW2IB7BIYFFsc1OdOhSRgqLHXglKjJ9hgE5yLdjwf2GaovzsAsa0pTuUh1nzi3enFM2LBctWhdTudrcrZneai2FC6YwaugRq2Bq8SfXdqKKipFECkCx-C0Q0uUgA-Y9dglHn_lIZt6W2H8Lpq55ynkyRajN43syK5qu-KcgB-WLX0D1Mjpvut9pEwuXetN_n3Lv-lACjvaIqTyjLc2PtiwEIisdMDV9uNNRVuPIsKUTAVn6zoncjkTjcOpiZGbz-_Ju3bGQ3aRkvW7uxho_seZ3r9EO55X4sENQvSOUr--_jp4a5KmQr8odQxm_H8fqeYDig606jvqcEgRd6-4pxtM2GM_Nr96A-LwXHXMzviMKa2TYIKXLyjbwZ7x6wmkPs1_rj21Sj9Yb_uWKHz2Ei-Vn_M-sndCtqM8k17OzdEaYH1KxOKdOogYYNQY_2WqiigssAygABqhHqHKQppY5E8IwNLYehIOQULxNWx70u663uSogD9AEz4rIWfMbtGuPZsrvh5MXYhOlAm_hMoIyA9ppYK-MViJfmA","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5053491673","display_name":"Zicheng Hu","orcid":"https://orcid.org/0000-0002-4168-1725"},"institutions":[{"id":"https://openalex.org/I180670191","display_name":"University of California, San Francisco","ror":"https://ror.org/043mz5j54","country_code":"US","type":"education","lineage":["https://openalex.org/I180670191"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Zicheng Hu","raw_affiliation_strings":["Bakar Computational Health Sciences Institute, University of California, San Francisco, CA, USA"],"affiliations":[{"raw_affiliation_string":"Bakar Computational Health Sciences Institute, University of California, San Francisco, CA, USA","institution_ids":["https://openalex.org/I180670191"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030539003","display_name":"Benjamin S. Glicksberg","orcid":"https://orcid.org/0000-0003-4515-8090"},"institutions":[{"id":"https://openalex.org/I180670191","display_name":"University of California, San Francisco","ror":"https://ror.org/043mz5j54","country_code":"US","type":"education","lineage":["https://openalex.org/I180670191"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Benjamin S Glicksberg","raw_affiliation_strings":["Bakar Computational Health Sciences Institute, University of California, San Francisco, CA, USA"],"affiliations":[{"raw_affiliation_string":"Bakar Computational Health Sciences Institute, University of California, San Francisco, CA, USA","institution_ids":["https://openalex.org/I180670191"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5036068985","display_name":"Atul J. Butte","orcid":"https://orcid.org/0000-0002-7433-2740"},"institutions":[{"id":"https://openalex.org/I180670191","display_name":"University of California, San Francisco","ror":"https://ror.org/043mz5j54","country_code":"US","type":"education","lineage":["https://openalex.org/I180670191"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Atul J Butte","raw_affiliation_strings":["Bakar Computational Health Sciences Institute, University of California, San Francisco, CA, USA"],"affiliations":[{"raw_affiliation_string":"Bakar Computational Health Sciences Institute, University of California, San Francisco, CA, USA","institution_ids":["https://openalex.org/I180670191"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5036068985","https://openalex.org/A5053491673"],"corresponding_institution_ids":["https://openalex.org/I180670191"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":2.0478,"has_fulltext":true,"cited_by_count":46,"citation_normalized_percentile":{"value":0.87623661,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":96,"max":99},"biblio":{"volume":"35","issue":"7","first_page":"1197","last_page":"1203"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9970999956130981,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9970999956130981,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9904000163078308,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9855999946594238,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/bioconductor","display_name":"Bioconductor","score":0.965133786201477},{"id":"https://openalex.org/keywords/mass-cytometry","display_name":"Mass cytometry","score":0.8640667200088501},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7966600656509399},{"id":"https://openalex.org/keywords/cytometry","display_name":"Cytometry","score":0.6784411668777466},{"id":"https://openalex.org/keywords/robustness","display_name":"Robustness (evolution)","score":0.6142371892929077},{"id":"https://openalex.org/keywords/gating","display_name":"Gating","score":0.5782023668289185},{"id":"https://openalex.org/keywords/flow-cytometry","display_name":"Flow cytometry","score":0.571721076965332},{"id":"https://openalex.org/keywords/information-loss","display_name":"Information loss","score":0.49357426166534424},{"id":"https://openalex.org/keywords/scripting-language","display_name":"Scripting language","score":0.47720202803611755},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4631490111351013},{"id":"https://openalex.org/keywords/r-package","display_name":"R package","score":0.4361977279186249},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.28388530015945435},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.11040887236595154},{"id":"https://openalex.org/keywords/immunology","display_name":"Immunology","score":0.09060963988304138}],"concepts":[{"id":"https://openalex.org/C2779694297","wikidata":"https://www.wikidata.org/wiki/Q2888953","display_name":"Bioconductor","level":3,"score":0.965133786201477},{"id":"https://openalex.org/C2778015335","wikidata":"https://www.wikidata.org/wiki/Q17051163","display_name":"Mass cytometry","level":4,"score":0.8640667200088501},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7966600656509399},{"id":"https://openalex.org/C2780339063","wikidata":"https://www.wikidata.org/wiki/Q5201367","display_name":"Cytometry","level":3,"score":0.6784411668777466},{"id":"https://openalex.org/C63479239","wikidata":"https://www.wikidata.org/wiki/Q7353546","display_name":"Robustness (evolution)","level":3,"score":0.6142371892929077},{"id":"https://openalex.org/C194544171","wikidata":"https://www.wikidata.org/wiki/Q21105679","display_name":"Gating","level":2,"score":0.5782023668289185},{"id":"https://openalex.org/C553184892","wikidata":"https://www.wikidata.org/wiki/Q1141429","display_name":"Flow cytometry","level":2,"score":0.571721076965332},{"id":"https://openalex.org/C2988416141","wikidata":"https://www.wikidata.org/wiki/Q6031139","display_name":"Information loss","level":2,"score":0.49357426166534424},{"id":"https://openalex.org/C61423126","wikidata":"https://www.wikidata.org/wiki/Q187432","display_name":"Scripting language","level":2,"score":0.47720202803611755},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4631490111351013},{"id":"https://openalex.org/C2984074130","wikidata":"https://www.wikidata.org/wiki/Q73539779","display_name":"R package","level":2,"score":0.4361977279186249},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.28388530015945435},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.11040887236595154},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.09060963988304138},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C459310","wikidata":"https://www.wikidata.org/wiki/Q117801","display_name":"Computational science","level":1,"score":0.0},{"id":"https://openalex.org/C42407357","wikidata":"https://www.wikidata.org/wiki/Q521","display_name":"Physiology","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C127716648","wikidata":"https://www.wikidata.org/wiki/Q104053","display_name":"Phenotype","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D000078332","descriptor_name":"Data Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000078332","descriptor_name":"Data Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000078332","descriptor_name":"Data Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003955","descriptor_name":"Diagnostic Tests, Routine","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D003955","descriptor_name":"Diagnostic Tests, Routine","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D003955","descriptor_name":"Diagnostic Tests, Routine","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D005434","descriptor_name":"Flow Cytometry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005434","descriptor_name":"Flow Cytometry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005434","descriptor_name":"Flow Cytometry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007252","descriptor_name":"Influenza Vaccines","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007252","descriptor_name":"Influenza Vaccines","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007252","descriptor_name":"Influenza Vaccines","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":6,"locations":[{"id":"doi:10.1093/bioinformatics/bty768","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty768","pdf_url":"https://watermark.silverchair.com/bty768.pdf?token=AQECAHi208BE49Ooan9kkhW_Ercy7Dm3ZL_9Cf3qfKAc485ysgAAAr0wggK5BgkqhkiG9w0BBwagggKqMIICpgIBADCCAp8GCSqGSIb3DQEHATAeBglghkgBZQMEAS4wEQQM0aXdxRnF2kmYfL-oAgEQgIICcOA2Xv01FSOl18NPg4JTp9lL7bKIfKDeY9mhE1vnLUxuJkdRgbETql2dj0WjTRwzI_-KDltPVZNjxloZgbqVDshYjad98XqK_n-7pMBASP3OEb_8LaS6py8Yrjs0-_ZYG68tAd3Z95QAOGTmMidA3zPerPTE6CvwhKLqyhgcpZxVu2QEkU1VbTo6gYMecUO1VKc9EY620yZPwum3sXsoG4aq3L3M5d0nj4FoeTSrvrs45dkkF0mEaeXRzndmjayxrziSaXX_Z_oyVmJ6Qkx96LX0O5rtybKU2mW2IB7BIYFFsc1OdOhSRgqLHXglKjJ9hgE5yLdjwf2GaovzsAsa0pTuUh1nzi3enFM2LBctWhdTudrcrZneai2FC6YwaugRq2Bq8SfXdqKKipFECkCx-C0Q0uUgA-Y9dglHn_lIZt6W2H8Lpq55ynkyRajN43syK5qu-KcgB-WLX0D1Mjpvut9pEwuXetN_n3Lv-lACjvaIqTyjLc2PtiwEIisdMDV9uNNRVuPIsKUTAVn6zoncjkTjcOpiZGbz-_Ju3bGQ3aRkvW7uxho_seZ3r9EO55X4sENQvSOUr--_jp4a5KmQr8odQxm_H8fqeYDig606jvqcEgRd6-4pxtM2GM_Nr96A-LwXHXMzviMKa2TYIKXLyjbwZ7x6wmkPs1_rj21Sj9Yb_uWKHz2Ei-Vn_M-sndCtqM8k17OzdEaYH1KxOKdOogYYNQY_2WqiigssAygABqhHqHKQppY5E8IwNLYehIOQULxNWx70u663uSogD9AEz4rIWfMbtGuPZsrvh5MXYhOlAm_hMoIyA9ppYK-MViJfmA","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:30169745","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30169745","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:ark:/13030/qt9hw2c64d","is_oa":false,"landing_page_url":null,"pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null},{"id":"pmh:oai:escholarship.org/ark:/13030/qt9hw2c64d","is_oa":false,"landing_page_url":"https://escholarship.org/uc/item/9hw2c64d","pdf_url":null,"source":{"id":"https://openalex.org/S4306400115","display_name":"eScholarship (California Digital Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I2801248553","host_organization_name":"California Digital Library","host_organization_lineage":["https://openalex.org/I2801248553"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics (Oxford, England), vol 35, iss 7","raw_type":"article"},{"id":"pmh:oai:europepmc.org:5438745","is_oa":false,"landing_page_url":"http://europepmc.org/pmc/articles/PMC6449751","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:6449751","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6449751","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/bty768","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty768","pdf_url":"https://watermark.silverchair.com/bty768.pdf?token=AQECAHi208BE49Ooan9kkhW_Ercy7Dm3ZL_9Cf3qfKAc485ysgAAAr0wggK5BgkqhkiG9w0BBwagggKqMIICpgIBADCCAp8GCSqGSIb3DQEHATAeBglghkgBZQMEAS4wEQQM0aXdxRnF2kmYfL-oAgEQgIICcOA2Xv01FSOl18NPg4JTp9lL7bKIfKDeY9mhE1vnLUxuJkdRgbETql2dj0WjTRwzI_-KDltPVZNjxloZgbqVDshYjad98XqK_n-7pMBASP3OEb_8LaS6py8Yrjs0-_ZYG68tAd3Z95QAOGTmMidA3zPerPTE6CvwhKLqyhgcpZxVu2QEkU1VbTo6gYMecUO1VKc9EY620yZPwum3sXsoG4aq3L3M5d0nj4FoeTSrvrs45dkkF0mEaeXRzndmjayxrziSaXX_Z_oyVmJ6Qkx96LX0O5rtybKU2mW2IB7BIYFFsc1OdOhSRgqLHXglKjJ9hgE5yLdjwf2GaovzsAsa0pTuUh1nzi3enFM2LBctWhdTudrcrZneai2FC6YwaugRq2Bq8SfXdqKKipFECkCx-C0Q0uUgA-Y9dglHn_lIZt6W2H8Lpq55ynkyRajN43syK5qu-KcgB-WLX0D1Mjpvut9pEwuXetN_n3Lv-lACjvaIqTyjLc2PtiwEIisdMDV9uNNRVuPIsKUTAVn6zoncjkTjcOpiZGbz-_Ju3bGQ3aRkvW7uxho_seZ3r9EO55X4sENQvSOUr--_jp4a5KmQr8odQxm_H8fqeYDig606jvqcEgRd6-4pxtM2GM_Nr96A-LwXHXMzviMKa2TYIKXLyjbwZ7x6wmkPs1_rj21Sj9Yb_uWKHz2Ei-Vn_M-sndCtqM8k17OzdEaYH1KxOKdOogYYNQY_2WqiigssAygABqhHqHKQppY5E8IwNLYehIOQULxNWx70u663uSogD9AEz4rIWfMbtGuPZsrvh5MXYhOlAm_hMoIyA9ppYK-MViJfmA","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1658833210","display_name":null,"funder_award_id":"HHSN272201200028C","funder_id":"https://openalex.org/F4320337355","funder_display_name":"National Institute of Allergy and Infectious Diseases"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337355","display_name":"National Institute of Allergy and Infectious Diseases","ror":"https://ror.org/043z4tv69"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2889103878.pdf","grobid_xml":"https://content.openalex.org/works/W2889103878.grobid-xml"},"referenced_works_count":27,"referenced_works":["https://openalex.org/W1580217007","https://openalex.org/W1812005042","https://openalex.org/W1963590894","https://openalex.org/W1964566606","https://openalex.org/W1971079822","https://openalex.org/W1978297432","https://openalex.org/W2014713379","https://openalex.org/W2025738474","https://openalex.org/W2097360283","https://openalex.org/W2143451223","https://openalex.org/W2160395304","https://openalex.org/W2163382783","https://openalex.org/W2165151093","https://openalex.org/W2181067433","https://openalex.org/W2279588067","https://openalex.org/W2282962877","https://openalex.org/W2330900028","https://openalex.org/W2512255557","https://openalex.org/W2577141559","https://openalex.org/W2612538354","https://openalex.org/W2761645446","https://openalex.org/W2792468812","https://openalex.org/W2804121824","https://openalex.org/W2886484539","https://openalex.org/W2950814274","https://openalex.org/W3013397538","https://openalex.org/W4294541781"],"related_works":["https://openalex.org/W2522948376","https://openalex.org/W2886484539","https://openalex.org/W2176701861","https://openalex.org/W2982252354","https://openalex.org/W2728564446","https://openalex.org/W3045904767","https://openalex.org/W2161868542","https://openalex.org/W2140163842","https://openalex.org/W3156537409","https://openalex.org/W2889103878"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":6},{"year":2024,"cited_by_count":6},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":8},{"year":2021,"cited_by_count":11},{"year":2020,"cited_by_count":6},{"year":2019,"cited_by_count":5}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
