{"id":"https://openalex.org/W2887949697","doi":"https://doi.org/10.1093/bioinformatics/bty649","title":"CharGer: clinical Characterization of Germline variants","display_name":"CharGer: clinical Characterization of Germline variants","publication_year":2018,"publication_date":"2018-08-09","ids":{"openalex":"https://openalex.org/W2887949697","doi":"https://doi.org/10.1093/bioinformatics/bty649","mag":"2887949697","pmid":"https://pubmed.ncbi.nlm.nih.gov/30102335"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/bty649","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty649","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/35/5/865/27994675/bty649.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/35/5/865/27994675/bty649.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5044908269","display_name":"Adam Scott","orcid":"https://orcid.org/0000-0003-4066-6053"},"institutions":[{"id":"https://openalex.org/I114277686","display_name":"James S. McDonnell Foundation","ror":"https://ror.org/03dy4aq19","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I114277686"]},{"id":"https://openalex.org/I204465549","display_name":"Washington University in St. Louis","ror":"https://ror.org/01yc7t268","country_code":"US","type":"education","lineage":["https://openalex.org/I204465549"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Adam D Scott","raw_affiliation_strings":["McDonnell Genome Institute, Washington University School of Medicine, St. Louis, MO, USA","Oncology Division, Washington University School of Medicine, St. Louis, MO, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"McDonnell Genome Institute, Washington University School of Medicine, St. Louis, MO, USA","institution_ids":["https://openalex.org/I114277686"]},{"raw_affiliation_string":"Oncology Division, Washington University School of Medicine, St. Louis, MO, USA","institution_ids":["https://openalex.org/I204465549"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032718790","display_name":"Kuan\u2010lin Huang","orcid":"https://orcid.org/0000-0002-5537-5817"},"institutions":[{"id":"https://openalex.org/I114277686","display_name":"James S. McDonnell Foundation","ror":"https://ror.org/03dy4aq19","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I114277686"]},{"id":"https://openalex.org/I204465549","display_name":"Washington University in St. Louis","ror":"https://ror.org/01yc7t268","country_code":"US","type":"education","lineage":["https://openalex.org/I204465549"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kuan-Lin Huang","raw_affiliation_strings":["McDonnell Genome Institute, Washington University School of Medicine, St. Louis, MO, USA","Oncology Division, Washington University School of Medicine, St. Louis, MO, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"McDonnell Genome Institute, Washington University School of Medicine, St. Louis, MO, USA","institution_ids":["https://openalex.org/I114277686"]},{"raw_affiliation_string":"Oncology Division, Washington University School of Medicine, St. Louis, MO, USA","institution_ids":["https://openalex.org/I204465549"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035123651","display_name":"Amila Weerasinghe","orcid":"https://orcid.org/0000-0003-3568-5823"},"institutions":[{"id":"https://openalex.org/I114277686","display_name":"James S. McDonnell Foundation","ror":"https://ror.org/03dy4aq19","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I114277686"]},{"id":"https://openalex.org/I204465549","display_name":"Washington University in St. Louis","ror":"https://ror.org/01yc7t268","country_code":"US","type":"education","lineage":["https://openalex.org/I204465549"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Amila Weerasinghe","raw_affiliation_strings":["McDonnell Genome Institute, Washington University School of Medicine, St. Louis, MO, USA","Oncology Division, Washington University School of Medicine, St. Louis, MO, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"McDonnell Genome Institute, Washington University School of Medicine, St. Louis, MO, USA","institution_ids":["https://openalex.org/I114277686"]},{"raw_affiliation_string":"Oncology Division, Washington University School of Medicine, St. Louis, MO, USA","institution_ids":["https://openalex.org/I204465549"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049355794","display_name":"R. Jay Mashl","orcid":"https://orcid.org/0000-0002-0365-8954"},"institutions":[{"id":"https://openalex.org/I114277686","display_name":"James S. McDonnell Foundation","ror":"https://ror.org/03dy4aq19","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I114277686"]},{"id":"https://openalex.org/I204465549","display_name":"Washington University in St. Louis","ror":"https://ror.org/01yc7t268","country_code":"US","type":"education","lineage":["https://openalex.org/I204465549"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"R Jay Mashl","raw_affiliation_strings":["McDonnell Genome Institute, Washington University School of Medicine, St. Louis, MO, USA","Oncology Division, Washington University School of Medicine, St. Louis, MO, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"McDonnell Genome Institute, Washington University School of Medicine, St. Louis, MO, USA","institution_ids":["https://openalex.org/I114277686"]},{"raw_affiliation_string":"Oncology Division, Washington University School of Medicine, St. Louis, MO, USA","institution_ids":["https://openalex.org/I204465549"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015935509","display_name":"Qingsong Gao","orcid":"https://orcid.org/0000-0002-9930-8499"},"institutions":[{"id":"https://openalex.org/I114277686","display_name":"James S. McDonnell Foundation","ror":"https://ror.org/03dy4aq19","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I114277686"]},{"id":"https://openalex.org/I204465549","display_name":"Washington University in St. Louis","ror":"https://ror.org/01yc7t268","country_code":"US","type":"education","lineage":["https://openalex.org/I204465549"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Qingsong Gao","raw_affiliation_strings":["McDonnell Genome Institute, Washington University School of Medicine, St. Louis, MO, USA","Oncology Division, Washington University School of Medicine, St. Louis, MO, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"McDonnell Genome Institute, Washington University School of Medicine, St. Louis, MO, USA","institution_ids":["https://openalex.org/I114277686"]},{"raw_affiliation_string":"Oncology Division, Washington University School of Medicine, St. Louis, MO, USA","institution_ids":["https://openalex.org/I204465549"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075744014","display_name":"Fernanda Martins Rodrigues","orcid":"https://orcid.org/0000-0002-2140-0690"},"institutions":[{"id":"https://openalex.org/I114277686","display_name":"James S. McDonnell Foundation","ror":"https://ror.org/03dy4aq19","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I114277686"]},{"id":"https://openalex.org/I204465549","display_name":"Washington University in St. Louis","ror":"https://ror.org/01yc7t268","country_code":"US","type":"education","lineage":["https://openalex.org/I204465549"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Fernanda Martins Rodrigues","raw_affiliation_strings":["McDonnell Genome Institute, Washington University School of Medicine, St. Louis, MO, USA","Oncology Division, Washington University School of Medicine, St. Louis, MO, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"McDonnell Genome Institute, Washington University School of Medicine, St. Louis, MO, USA","institution_ids":["https://openalex.org/I114277686"]},{"raw_affiliation_string":"Oncology Division, Washington University School of Medicine, St. Louis, MO, USA","institution_ids":["https://openalex.org/I204465549"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024153866","display_name":"Matthew A. Wyczalkowski","orcid":"https://orcid.org/0000-0003-4197-551X"},"institutions":[{"id":"https://openalex.org/I114277686","display_name":"James S. McDonnell Foundation","ror":"https://ror.org/03dy4aq19","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I114277686"]},{"id":"https://openalex.org/I204465549","display_name":"Washington University in St. Louis","ror":"https://ror.org/01yc7t268","country_code":"US","type":"education","lineage":["https://openalex.org/I204465549"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Matthew A Wyczalkowski","raw_affiliation_strings":["McDonnell Genome Institute, Washington University School of Medicine, St. Louis, MO, USA","Oncology Division, Washington University School of Medicine, St. Louis, MO, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"McDonnell Genome Institute, Washington University School of Medicine, St. Louis, MO, USA","institution_ids":["https://openalex.org/I114277686"]},{"raw_affiliation_string":"Oncology Division, Washington University School of Medicine, St. Louis, MO, USA","institution_ids":["https://openalex.org/I204465549"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100449520","display_name":"Li Ding","orcid":"https://orcid.org/0000-0003-1517-2975"},"institutions":[{"id":"https://openalex.org/I114277686","display_name":"James S. McDonnell Foundation","ror":"https://ror.org/03dy4aq19","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I114277686"]},{"id":"https://openalex.org/I204465549","display_name":"Washington University in St. Louis","ror":"https://ror.org/01yc7t268","country_code":"US","type":"education","lineage":["https://openalex.org/I204465549"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Li Ding","raw_affiliation_strings":["Department of Genetics, Washington University School of Medicine, St. Louis, MO, USA","McDonnell Genome Institute, Washington University School of Medicine, St. Louis, MO, USA","Oncology Division, Washington University School of Medicine, St. Louis, MO, USA","Siteman Cancer Center, School of Medicine, Washington University in St. Louis, St. Louis, MO, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Genetics, Washington University School of Medicine, St. Louis, MO, USA","institution_ids":["https://openalex.org/I204465549"]},{"raw_affiliation_string":"McDonnell Genome Institute, Washington University School of Medicine, St. Louis, MO, USA","institution_ids":["https://openalex.org/I114277686"]},{"raw_affiliation_string":"Oncology Division, Washington University School of Medicine, St. Louis, MO, USA","institution_ids":["https://openalex.org/I204465549"]},{"raw_affiliation_string":"Siteman Cancer Center, School of Medicine, Washington University in St. Louis, St. Louis, MO, USA","institution_ids":["https://openalex.org/I204465549"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5044908269","https://openalex.org/A5100449520"],"corresponding_institution_ids":["https://openalex.org/I114277686","https://openalex.org/I204465549"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":3.7962,"has_fulltext":true,"cited_by_count":60,"citation_normalized_percentile":{"value":0.93807198,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":96,"max":99},"biblio":{"volume":"35","issue":"5","first_page":"865","last_page":"867"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11642","display_name":"Genomics and Rare Diseases","score":0.9926999807357788,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11642","display_name":"Genomics and Rare Diseases","score":0.9926999807357788,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10261","display_name":"Genetic Associations and Epidemiology","score":0.0012000000569969416,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10665","display_name":"Cystic Fibrosis Research Advances","score":0.000699999975040555,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/python","display_name":"Python (programming language)","score":0.8529670834541321},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7855538725852966},{"id":"https://openalex.org/keywords/mit-license","display_name":"MIT License","score":0.6108776926994324},{"id":"https://openalex.org/keywords/pathogenicity","display_name":"Pathogenicity","score":0.5502236485481262},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.5407723188400269},{"id":"https://openalex.org/keywords/germline","display_name":"Germline","score":0.5375428199768066},{"id":"https://openalex.org/keywords/source-code","display_name":"Source code","score":0.5048988461494446},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.504804253578186},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.4856816232204437},{"id":"https://openalex.org/keywords/unix","display_name":"Unix","score":0.44055742025375366},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.13068264722824097},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.11004462838172913}],"concepts":[{"id":"https://openalex.org/C519991488","wikidata":"https://www.wikidata.org/wiki/Q28865","display_name":"Python (programming language)","level":2,"score":0.8529670834541321},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7855538725852966},{"id":"https://openalex.org/C174183944","wikidata":"https://www.wikidata.org/wiki/Q334661","display_name":"MIT License","level":3,"score":0.6108776926994324},{"id":"https://openalex.org/C64502627","wikidata":"https://www.wikidata.org/wiki/Q170065","display_name":"Pathogenicity","level":2,"score":0.5502236485481262},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5407723188400269},{"id":"https://openalex.org/C109825262","wikidata":"https://www.wikidata.org/wiki/Q1139164","display_name":"Germline","level":3,"score":0.5375428199768066},{"id":"https://openalex.org/C43126263","wikidata":"https://www.wikidata.org/wiki/Q128751","display_name":"Source code","level":2,"score":0.5048988461494446},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.504804253578186},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.4856816232204437},{"id":"https://openalex.org/C112968700","wikidata":"https://www.wikidata.org/wiki/Q11368","display_name":"Unix","level":3,"score":0.44055742025375366},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.13068264722824097},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.11004462838172913},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D005854","descriptor_name":"Germ Cells","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005854","descriptor_name":"Germ Cells","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005854","descriptor_name":"Germ Cells","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/bty649","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty649","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/35/5/865/27994675/bty649.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:30102335","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30102335","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:europepmc.org:5989856","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6394391","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/bty649","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty649","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/35/5/865/27994675/bty649.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G12022336","display_name":null,"funder_award_id":"R01 CA178383","funder_id":"https://openalex.org/F4320337351","funder_display_name":"National Cancer Institute"},{"id":"https://openalex.org/G3108850909","display_name":null,"funder_award_id":"CA178383","funder_id":"https://openalex.org/F4320337351","funder_display_name":"National Cancer Institute"},{"id":"https://openalex.org/G3611750151","display_name":null,"funder_award_id":"U24 CA211006","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G5026771106","display_name":null,"funder_award_id":"HG009711","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G5410377819","display_name":null,"funder_award_id":"CA211006","funder_id":"https://openalex.org/F4320337351","funder_display_name":"National Cancer Institute"},{"id":"https://openalex.org/G5601148834","display_name":null,"funder_award_id":"R25 DA027995","funder_id":"https://openalex.org/F4320337347","funder_display_name":"National Institute on Drug Abuse"},{"id":"https://openalex.org/G6227815097","display_name":null,"funder_award_id":"R01 HG009711","funder_id":"https://openalex.org/F4320337348","funder_display_name":"National Human Genome Research Institute"},{"id":"https://openalex.org/G707968403","display_name":null,"funder_award_id":"U24 CA211006","funder_id":"https://openalex.org/F4320337351","funder_display_name":"National Cancer Institute"},{"id":"https://openalex.org/G7491566743","display_name":null,"funder_award_id":"R01 CA18006","funder_id":"https://openalex.org/F4320337351","funder_display_name":"National Cancer Institute"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337347","display_name":"National Institute on Drug Abuse","ror":"https://ror.org/00fq5cm18"},{"id":"https://openalex.org/F4320337348","display_name":"National Human Genome Research Institute","ror":"https://ror.org/00baak391"},{"id":"https://openalex.org/F4320337351","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2887949697.pdf","grobid_xml":"https://content.openalex.org/works/W2887949697.grobid-xml"},"referenced_works_count":12,"referenced_works":["https://openalex.org/W2051978340","https://openalex.org/W2072931688","https://openalex.org/W2256016639","https://openalex.org/W2301321527","https://openalex.org/W2303408208","https://openalex.org/W2417483443","https://openalex.org/W2439991713","https://openalex.org/W2580887223","https://openalex.org/W2612091911","https://openalex.org/W2619038304","https://openalex.org/W2794804602","https://openalex.org/W2796208126"],"related_works":["https://openalex.org/W3193204913","https://openalex.org/W4309247532","https://openalex.org/W4386463918","https://openalex.org/W2382986841","https://openalex.org/W1588752736","https://openalex.org/W2766482558","https://openalex.org/W4385413248","https://openalex.org/W4311683883","https://openalex.org/W2020328473","https://openalex.org/W2887949697"],"abstract_inverted_index":{"SUMMARY:":[0],"CharGer":[1,19,95],"(Characterization":[2],"of":[3,16],"Germline":[4],"variants)":[5],"is":[6,71,77,85,96,102],"a":[7,62],"software":[8],"tool":[9],"for":[10,43],"interpreting":[11],"and":[12,24,30,36,76,101],"predicting":[13],"clinical":[14],"pathogenicity":[15,48],"germline":[17],"variants.":[18],"gathers":[20],"evidence":[21],"from":[22],"databases":[23],"annotations,":[25],"provided":[26],"by":[27],"local":[28],"tools":[29],"files":[31],"or":[32],"via":[33],"ReST":[34],"APIs,":[35],"classifies":[37],"variants":[38],"according":[39],"to":[40,60],"ACMG":[41],"guidelines":[42],"assessing":[44],"variant":[45],"pathogenicity.":[46],"User-designed":[47],"criteria":[49],"can":[50],"be":[51],"incorporated":[52],"into":[53],"CharGer's":[54],"flexible":[55],"framework,":[56],"thereby":[57],"allowing":[58],"users":[59],"create":[61],"customized":[63],"classification":[64],"protocol.":[65],"AVAILABILITY":[66],"AND":[67],"IMPLEMENTATION:":[68],"Source":[69],"code":[70],"freely":[72],"available":[73,113],"at":[74,114],"https://github.com/ding-lab/CharGer":[75],"distributed":[78,87],"under":[79],"the":[80,89],"GNU":[81],"GPL-v3.0":[82],"license.":[83],"Software":[84],"also":[86],"through":[88],"Python":[90,99],"Package":[91],"Index":[92],"(PyPI)":[93],"repository.":[94],"implemented":[97],"in":[98],"2.7":[100],"supported":[103],"on":[104],"Unix-based":[105],"operating":[106],"systems.":[107],"SUPPLEMENTARY":[108],"INFORMATION:":[109],"Supplementary":[110],"data":[111],"are":[112],"Bioinformatics":[115],"online.":[116]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":8},{"year":2024,"cited_by_count":6},{"year":2023,"cited_by_count":12},{"year":2022,"cited_by_count":10},{"year":2021,"cited_by_count":11},{"year":2020,"cited_by_count":8},{"year":2019,"cited_by_count":3}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
