{"id":"https://openalex.org/W2835515562","doi":"https://doi.org/10.1093/bioinformatics/bty583","title":"LigVoxel: inpainting binding pockets using 3D-convolutional neural networks","display_name":"LigVoxel: inpainting binding pockets using 3D-convolutional neural networks","publication_year":2018,"publication_date":"2018-07-04","ids":{"openalex":"https://openalex.org/W2835515562","doi":"https://doi.org/10.1093/bioinformatics/bty583","mag":"2835515562","pmid":"https://pubmed.ncbi.nlm.nih.gov/29982392"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/bty583","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty583","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://zenodo.org/record/3505378","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5048906009","display_name":"Miha \u0160kali\u010d","orcid":"https://orcid.org/0000-0003-4143-4609"},"institutions":[{"id":"https://openalex.org/I170486558","display_name":"Universitat Pompeu Fabra","ror":"https://ror.org/04n0g0b29","country_code":"ES","type":"education","lineage":["https://openalex.org/I170486558"]},{"id":"https://openalex.org/I2801864671","display_name":"Barcelona Biomedical Research Park","ror":"https://ror.org/05sajct49","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2801864671"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Miha Skalic","raw_affiliation_strings":["Computational Science Laboratory, Universitat Pompeu Fabra, Barcelona Biomedical Research Park (PRBB)"],"raw_orcid":"https://orcid.org/0000-0003-4143-4609","affiliations":[{"raw_affiliation_string":"Computational Science Laboratory, Universitat Pompeu Fabra, Barcelona Biomedical Research Park (PRBB)","institution_ids":["https://openalex.org/I170486558","https://openalex.org/I2801864671"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005495160","display_name":"Alejandro Varela\u2010Rial","orcid":"https://orcid.org/0000-0002-6918-1765"},"institutions":[{"id":"https://openalex.org/I2801864671","display_name":"Barcelona Biomedical Research Park","ror":"https://ror.org/05sajct49","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2801864671"]},{"id":"https://openalex.org/I4210153560","display_name":"Acellera (Spain)","ror":"https://ror.org/051pfzb30","country_code":"ES","type":"company","lineage":["https://openalex.org/I4210153560"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Alejandro Varela-Rial","raw_affiliation_strings":["Acellera, Barcelona Biomedical Research Park (PRBB), Doctor Aiguader 88, Barcelona, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Acellera, Barcelona Biomedical Research Park (PRBB), Doctor Aiguader 88, Barcelona, Spain","institution_ids":["https://openalex.org/I2801864671","https://openalex.org/I4210153560"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100700305","display_name":"Jos\u00e9 Jim\u00e9nez-Luna","orcid":"https://orcid.org/0000-0002-5335-7834"},"institutions":[{"id":"https://openalex.org/I170486558","display_name":"Universitat Pompeu Fabra","ror":"https://ror.org/04n0g0b29","country_code":"ES","type":"education","lineage":["https://openalex.org/I170486558"]},{"id":"https://openalex.org/I2801864671","display_name":"Barcelona Biomedical Research Park","ror":"https://ror.org/05sajct49","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2801864671"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Jos\u00e9 Jim\u00e9nez","raw_affiliation_strings":["Computational Science Laboratory, Universitat Pompeu Fabra, Barcelona Biomedical Research Park (PRBB)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computational Science Laboratory, Universitat Pompeu Fabra, Barcelona Biomedical Research Park (PRBB)","institution_ids":["https://openalex.org/I170486558","https://openalex.org/I2801864671"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103860765","display_name":"G\u00e9rard Martinez","orcid":"https://orcid.org/0000-0001-6277-6769"},"institutions":[{"id":"https://openalex.org/I170486558","display_name":"Universitat Pompeu Fabra","ror":"https://ror.org/04n0g0b29","country_code":"ES","type":"education","lineage":["https://openalex.org/I170486558"]},{"id":"https://openalex.org/I2801864671","display_name":"Barcelona Biomedical Research Park","ror":"https://ror.org/05sajct49","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2801864671"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Gerard Mart\u00ednez-Rosell","raw_affiliation_strings":["Computational Science Laboratory, Universitat Pompeu Fabra, Barcelona Biomedical Research Park (PRBB)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computational Science Laboratory, Universitat Pompeu Fabra, Barcelona Biomedical Research Park (PRBB)","institution_ids":["https://openalex.org/I170486558","https://openalex.org/I2801864671"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5027026045","display_name":"Gianni De Fabritiis","orcid":"https://orcid.org/0000-0003-3913-4877"},"institutions":[{"id":"https://openalex.org/I11932220","display_name":"Instituci\u00f3 Catalana de Recerca i Estudis Avan\u00e7ats","ror":"https://ror.org/0371hy230","country_code":"ES","type":"nonprofit","lineage":["https://openalex.org/I11932220"]},{"id":"https://openalex.org/I170486558","display_name":"Universitat Pompeu Fabra","ror":"https://ror.org/04n0g0b29","country_code":"ES","type":"education","lineage":["https://openalex.org/I170486558"]},{"id":"https://openalex.org/I2801864671","display_name":"Barcelona Biomedical Research Park","ror":"https://ror.org/05sajct49","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2801864671"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Gianni De Fabritiis","raw_affiliation_strings":["Computational Science Laboratory, Universitat Pompeu Fabra, Barcelona Biomedical Research Park (PRBB)","Instituci\u00f3 Catalana de Recerca i Estudis Avan\u00e7ats (ICREA), Passeig Lluis Companys 23, Barcelona, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computational Science Laboratory, Universitat Pompeu Fabra, Barcelona Biomedical Research Park (PRBB)","institution_ids":["https://openalex.org/I170486558","https://openalex.org/I2801864671"]},{"raw_affiliation_string":"Instituci\u00f3 Catalana de Recerca i Estudis Avan\u00e7ats (ICREA), Passeig Lluis Companys 23, Barcelona, Spain","institution_ids":["https://openalex.org/I11932220"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5027026045"],"corresponding_institution_ids":["https://openalex.org/I11932220","https://openalex.org/I170486558","https://openalex.org/I2801864671"],"apc_list":{"value":3989,"currency":"USD","value_usd":3989},"apc_paid":null,"fwci":6.8647,"has_fulltext":false,"cited_by_count":70,"citation_normalized_percentile":{"value":0.97438788,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"35","issue":"2","first_page":"243","last_page":"250"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.48590001463890076,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.48590001463890076,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.14329999685287476,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.10909999907016754,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6765627264976501},{"id":"https://openalex.org/keywords/inpainting","display_name":"Inpainting","score":0.5956308245658875},{"id":"https://openalex.org/keywords/drug-discovery","display_name":"Drug discovery","score":0.5325388312339783},{"id":"https://openalex.org/keywords/convolutional-neural-network","display_name":"Convolutional neural network","score":0.5167933702468872},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4992094039916992},{"id":"https://openalex.org/keywords/suite","display_name":"Suite","score":0.45653897523880005},{"id":"https://openalex.org/keywords/exploit","display_name":"Exploit","score":0.4423699378967285},{"id":"https://openalex.org/keywords/ligand","display_name":"Ligand (biochemistry)","score":0.43676021695137024},{"id":"https://openalex.org/keywords/intuition","display_name":"Intuition","score":0.42984533309936523},{"id":"https://openalex.org/keywords/maximization","display_name":"Maximization","score":0.42915016412734985},{"id":"https://openalex.org/keywords/cheminformatics","display_name":"Cheminformatics","score":0.4203181862831116},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.34120190143585205},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3310962915420532},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.2587543725967407},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.20904409885406494},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.11722439527511597},{"id":"https://openalex.org/keywords/computational-chemistry","display_name":"Computational chemistry","score":0.11706584692001343},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.10073277354240417},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.08757111430168152}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6765627264976501},{"id":"https://openalex.org/C11727466","wikidata":"https://www.wikidata.org/wiki/Q1628157","display_name":"Inpainting","level":3,"score":0.5956308245658875},{"id":"https://openalex.org/C74187038","wikidata":"https://www.wikidata.org/wiki/Q1418791","display_name":"Drug discovery","level":2,"score":0.5325388312339783},{"id":"https://openalex.org/C81363708","wikidata":"https://www.wikidata.org/wiki/Q17084460","display_name":"Convolutional neural network","level":2,"score":0.5167933702468872},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4992094039916992},{"id":"https://openalex.org/C79581498","wikidata":"https://www.wikidata.org/wiki/Q1367530","display_name":"Suite","level":2,"score":0.45653897523880005},{"id":"https://openalex.org/C165696696","wikidata":"https://www.wikidata.org/wiki/Q11287","display_name":"Exploit","level":2,"score":0.4423699378967285},{"id":"https://openalex.org/C116569031","wikidata":"https://www.wikidata.org/wiki/Q899107","display_name":"Ligand (biochemistry)","level":3,"score":0.43676021695137024},{"id":"https://openalex.org/C132010649","wikidata":"https://www.wikidata.org/wiki/Q189222","display_name":"Intuition","level":2,"score":0.42984533309936523},{"id":"https://openalex.org/C2776330181","wikidata":"https://www.wikidata.org/wiki/Q18358244","display_name":"Maximization","level":2,"score":0.42915016412734985},{"id":"https://openalex.org/C68762167","wikidata":"https://www.wikidata.org/wiki/Q910164","display_name":"Cheminformatics","level":2,"score":0.4203181862831116},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.34120190143585205},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3310962915420532},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.2587543725967407},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.20904409885406494},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.11722439527511597},{"id":"https://openalex.org/C147597530","wikidata":"https://www.wikidata.org/wiki/Q369472","display_name":"Computational chemistry","level":1,"score":0.11706584692001343},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.10073277354240417},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.08757111430168152},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.0},{"id":"https://openalex.org/C126255220","wikidata":"https://www.wikidata.org/wiki/Q141495","display_name":"Mathematical optimization","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C170493617","wikidata":"https://www.wikidata.org/wiki/Q208467","display_name":"Receptor","level":2,"score":0.0},{"id":"https://openalex.org/C95457728","wikidata":"https://www.wikidata.org/wiki/Q309","display_name":"History","level":0,"score":0.0},{"id":"https://openalex.org/C166957645","wikidata":"https://www.wikidata.org/wiki/Q23498","display_name":"Archaeology","level":1,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/bty583","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty583","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:29982392","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29982392","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":"Journal Article"},{"id":"pmh:oai:zenodo.org:3505378","is_oa":true,"landing_page_url":"https://zenodo.org/record/3505378","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"pmh:oai:zenodo.org:3505378","is_oa":true,"landing_page_url":"https://zenodo.org/record/3505378","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G7258449643","display_name":null,"funder_award_id":"BIO2017\u201082628\u2010P","funder_id":"https://openalex.org/F4320321837","funder_display_name":"Ministerio de Econom\u00eda y Competitividad"}],"funders":[{"id":"https://openalex.org/F4320321595","display_name":"Federaci\u00f3n Espa\u00f1ola de Enfermedades Raras","ror":"https://ror.org/0348bpk17"},{"id":"https://openalex.org/F4320321837","display_name":"Ministerio de Econom\u00eda y Competitividad","ror":"https://ror.org/034900433"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":35,"referenced_works":["https://openalex.org/W1522301498","https://openalex.org/W1965555277","https://openalex.org/W1980969309","https://openalex.org/W1983194490","https://openalex.org/W1997655258","https://openalex.org/W2000388507","https://openalex.org/W2027065525","https://openalex.org/W2067907944","https://openalex.org/W2069152576","https://openalex.org/W2070756053","https://openalex.org/W2103591844","https://openalex.org/W2105668062","https://openalex.org/W2112796928","https://openalex.org/W2130479394","https://openalex.org/W2131053638","https://openalex.org/W2132083787","https://openalex.org/W2139421133","https://openalex.org/W2149095014","https://openalex.org/W2163605009","https://openalex.org/W2183050958","https://openalex.org/W2296686360","https://openalex.org/W2384495648","https://openalex.org/W2396663079","https://openalex.org/W2502949459","https://openalex.org/W2583907533","https://openalex.org/W2617750324","https://openalex.org/W2784213390","https://openalex.org/W2784883284","https://openalex.org/W2963042536","https://openalex.org/W2964121744","https://openalex.org/W3104705366","https://openalex.org/W6631190155","https://openalex.org/W6639565716","https://openalex.org/W6684191040","https://openalex.org/W6748366063"],"related_works":["https://openalex.org/W2380775572","https://openalex.org/W2213520135","https://openalex.org/W4242046654","https://openalex.org/W1504109132","https://openalex.org/W3134074939","https://openalex.org/W2117562399","https://openalex.org/W3174923100","https://openalex.org/W2244018504","https://openalex.org/W4298074124","https://openalex.org/W2003548600"],"abstract_inverted_index":{"Motivation:":[0],"Structure-based":[1],"drug":[2,151],"discovery":[3,152],"methods":[4],"exploit":[5],"protein":[6,16,35,86],"structural":[7],"information":[8],"to":[9,14,100],"design":[10],"small":[11],"molecules":[12],"binding":[13],"given":[15,114],"pockets.":[17,36],"This":[18],"work":[19],"proposes":[20],"a":[21,54,63,113,134],"purely":[22],"data":[23,172],"driven,":[24],"structure-based":[25,150],"approach":[26],"for":[27,148],"imaging":[28],"ligands":[29,98],"as":[30,160],"spatial":[31,73],"fields":[32,91,111],"in":[33,127],"target":[34,102],"We":[37,66,140],"use":[38],"an":[39],"end-to-end":[40],"deep":[41],"learning":[42],"framework":[43],"trained":[44],"on":[45,116],"experimental":[46],"protein-ligand":[47],"complexes":[48],"with":[49,94],"the":[50,85,101,106,109,117,122,163],"intention":[51],"of":[52,75,96,105,130,136,162],"mimicking":[53],"chemist's":[55],"intuition":[56],"at":[57,175],"manually":[58],"placing":[59],"atoms":[60],"when":[61],"designing":[62],"new":[64],"compound.":[65],"show":[67],"that":[68,142],"these":[69,143],"models":[70,144],"can":[71,145],"generate":[72],"images":[74],"ligand":[76,115,124],"chemical":[77],"properties":[78],"like":[79],"occupancy,":[80],"aromaticity":[81],"and":[82,112,155],"donor-acceptor":[83],"matching":[84],"pocket.":[87,103],"Results:":[88],"The":[89],"predicted":[90,110],"considerably":[92],"overlap":[93,107],"those":[95],"unseen":[97],"bound":[99],"Maximization":[104],"between":[108],"Astex":[118],"diverse":[119],"set":[120],"recovers":[121],"original":[123],"crystal":[125],"poses":[126],"70":[128],"out":[129],"85":[131],"cases":[132],"within":[133],"threshold":[135],"2":[137],"\u00c5":[138],"RMSD.":[139],"expect":[141],"be":[146],"used":[147],"guiding":[149],"approaches.":[153],"Availability":[154],"implementation:":[156],"LigVoxel":[157],"is":[158],"available":[159,174],"part":[161],"PlayMolecule.org":[164],"molecular":[165],"web":[166],"application":[167],"suite.":[168],"Supplementary":[169,171],"information:":[170],"are":[173],"Bioinformatics":[176],"online.":[177]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":7},{"year":2024,"cited_by_count":5},{"year":2023,"cited_by_count":11},{"year":2022,"cited_by_count":8},{"year":2021,"cited_by_count":15},{"year":2020,"cited_by_count":9},{"year":2019,"cited_by_count":9},{"year":2018,"cited_by_count":2},{"year":2012,"cited_by_count":1}],"updated_date":"2026-08-26T07:47:46.906454","created_date":"2025-10-10T00:00:00"}
