{"id":"https://openalex.org/W2783460020","doi":"https://doi.org/10.1093/bioinformatics/bty490","title":"GIFT: Guided and Interpretable Factorization for Tensors with an application to large-scale multi-platform cancer analysis","display_name":"GIFT: Guided and Interpretable Factorization for Tensors with an application to large-scale multi-platform cancer analysis","publication_year":2018,"publication_date":"2018-06-18","ids":{"openalex":"https://openalex.org/W2783460020","doi":"https://doi.org/10.1093/bioinformatics/bty490","mag":"2783460020","pmid":"https://pubmed.ncbi.nlm.nih.gov/29931238"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/bty490","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty490","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/24/4151/27088755/bty490.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["arxiv","crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/34/24/4151/27088755/bty490.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100376261","display_name":"Jungwoo Lee","orcid":"https://orcid.org/0000-0002-6804-980X"},"institutions":[{"id":"https://openalex.org/I139264467","display_name":"Seoul National University","ror":"https://ror.org/04h9pn542","country_code":"KR","type":"education","lineage":["https://openalex.org/I139264467"]},{"id":"https://openalex.org/I4210116376","display_name":"SUNY Korea","ror":"https://ror.org/02d07gm56","country_code":"KR","type":"education","lineage":["https://openalex.org/I4210116376"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Jungwoo Lee","raw_affiliation_strings":["The State University of New York (SUNY) Korea","Seoul National University"],"affiliations":[{"raw_affiliation_string":"The State University of New York (SUNY) Korea","institution_ids":["https://openalex.org/I4210116376"]},{"raw_affiliation_string":"Seoul National University","institution_ids":["https://openalex.org/I139264467"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086691172","display_name":"Sejoon Oh","orcid":"https://orcid.org/0000-0002-0295-2756"},"institutions":[{"id":"https://openalex.org/I139264467","display_name":"Seoul National University","ror":"https://ror.org/04h9pn542","country_code":"KR","type":"education","lineage":["https://openalex.org/I139264467"]},{"id":"https://openalex.org/I4210116376","display_name":"SUNY Korea","ror":"https://ror.org/02d07gm56","country_code":"KR","type":"education","lineage":["https://openalex.org/I4210116376"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Sejoon Oh","raw_affiliation_strings":["Seoul National University","The State University of New York (SUNY) Korea"],"affiliations":[{"raw_affiliation_string":"Seoul National University","institution_ids":["https://openalex.org/I139264467"]},{"raw_affiliation_string":"The State University of New York (SUNY) Korea","institution_ids":["https://openalex.org/I4210116376"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5062187341","display_name":"Lee Sael","orcid":"https://orcid.org/0000-0002-9066-5756"},"institutions":[{"id":"https://openalex.org/I139264467","display_name":"Seoul National University","ror":"https://ror.org/04h9pn542","country_code":"KR","type":"education","lineage":["https://openalex.org/I139264467"]},{"id":"https://openalex.org/I4210116376","display_name":"SUNY Korea","ror":"https://ror.org/02d07gm56","country_code":"KR","type":"education","lineage":["https://openalex.org/I4210116376"]}],"countries":["KR"],"is_corresponding":true,"raw_author_name":"Lee Sael","raw_affiliation_strings":["Seoul National University","The State University of New York (SUNY) Korea"],"affiliations":[{"raw_affiliation_string":"Seoul National University","institution_ids":["https://openalex.org/I139264467"]},{"raw_affiliation_string":"The State University of New York (SUNY) Korea","institution_ids":["https://openalex.org/I4210116376"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5062187341"],"corresponding_institution_ids":["https://openalex.org/I139264467","https://openalex.org/I4210116376"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":1.0064,"has_fulltext":true,"cited_by_count":11,"citation_normalized_percentile":{"value":0.69368132,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"34","issue":"24","first_page":"4151","last_page":"4158"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12303","display_name":"Tensor decomposition and applications","score":0.9746999740600586,"subfield":{"id":"https://openalex.org/subfields/2605","display_name":"Computational Mathematics"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T12303","display_name":"Tensor decomposition and applications","score":0.9746999740600586,"subfield":{"id":"https://openalex.org/subfields/2605","display_name":"Computational Mathematics"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.958899974822998,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10269","display_name":"Epigenetics and DNA Methylation","score":0.9588000178337097,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/scalability","display_name":"Scalability","score":0.7632801532745361},{"id":"https://openalex.org/keywords/matrix-decomposition","display_name":"Matrix decomposition","score":0.6946826577186584},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6811299324035645},{"id":"https://openalex.org/keywords/regularization","display_name":"Regularization (linguistics)","score":0.5437589287757874},{"id":"https://openalex.org/keywords/factorization","display_name":"Factorization","score":0.5401827692985535},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.5120354294776917},{"id":"https://openalex.org/keywords/constraint","display_name":"Constraint (computer-aided design)","score":0.5012087821960449},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.44841212034225464},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3884302079677582},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.38158702850341797},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.35921773314476013},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.17252537608146667},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.16398939490318298},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.09255743026733398}],"concepts":[{"id":"https://openalex.org/C48044578","wikidata":"https://www.wikidata.org/wiki/Q727490","display_name":"Scalability","level":2,"score":0.7632801532745361},{"id":"https://openalex.org/C42355184","wikidata":"https://www.wikidata.org/wiki/Q1361088","display_name":"Matrix decomposition","level":3,"score":0.6946826577186584},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6811299324035645},{"id":"https://openalex.org/C2776135515","wikidata":"https://www.wikidata.org/wiki/Q17143721","display_name":"Regularization (linguistics)","level":2,"score":0.5437589287757874},{"id":"https://openalex.org/C187834632","wikidata":"https://www.wikidata.org/wiki/Q188804","display_name":"Factorization","level":2,"score":0.5401827692985535},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.5120354294776917},{"id":"https://openalex.org/C2776036281","wikidata":"https://www.wikidata.org/wiki/Q48769818","display_name":"Constraint (computer-aided design)","level":2,"score":0.5012087821960449},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.44841212034225464},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3884302079677582},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.38158702850341797},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.35921773314476013},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.17252537608146667},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.16398939490318298},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.09255743026733398},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.0},{"id":"https://openalex.org/C158693339","wikidata":"https://www.wikidata.org/wiki/Q190524","display_name":"Eigenvalues and eigenvectors","level":2,"score":0.0},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1093/bioinformatics/bty490","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty490","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/24/4151/27088755/bty490.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:29931238","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29931238","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:arXiv.org:1801.02769","is_oa":true,"landing_page_url":"http://arxiv.org/abs/1801.02769","pdf_url":"https://arxiv.org/pdf/1801.02769","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},{"id":"pmh:oai:europepmc.org:5262787","is_oa":false,"landing_page_url":"http://europepmc.org/pmc/articles/PMC6289137","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:6289137","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6289137","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/bty490","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty490","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/24/4151/27088755/bty490.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G509565104","display_name":null,"funder_award_id":"NRF-2015R1C1A2A01055739","funder_id":"https://openalex.org/F4320322120","funder_display_name":"National Research Foundation of Korea"}],"funders":[{"id":"https://openalex.org/F4320322120","display_name":"National Research Foundation of Korea","ror":"https://ror.org/013aysd81"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2783460020.pdf","grobid_xml":"https://content.openalex.org/works/W2783460020.grobid-xml"},"referenced_works_count":57,"referenced_works":["https://openalex.org/W1638590376","https://openalex.org/W1865889816","https://openalex.org/W1963826206","https://openalex.org/W1966331733","https://openalex.org/W1967220865","https://openalex.org/W2006778197","https://openalex.org/W2007491213","https://openalex.org/W2010457001","https://openalex.org/W2013912476","https://openalex.org/W2033560557","https://openalex.org/W2039844033","https://openalex.org/W2040982194","https://openalex.org/W2041440766","https://openalex.org/W2044702943","https://openalex.org/W2046607138","https://openalex.org/W2054141820","https://openalex.org/W2078318361","https://openalex.org/W2089952661","https://openalex.org/W2096283457","https://openalex.org/W2096578014","https://openalex.org/W2097893773","https://openalex.org/W2100714130","https://openalex.org/W2118808185","https://openalex.org/W2122211979","https://openalex.org/W2126068134","https://openalex.org/W2139258080","https://openalex.org/W2156763800","https://openalex.org/W2158485828","https://openalex.org/W2162163922","https://openalex.org/W2214074259","https://openalex.org/W2314964555","https://openalex.org/W2440837865","https://openalex.org/W2520495422","https://openalex.org/W2560367415","https://openalex.org/W2584150242","https://openalex.org/W2585713683","https://openalex.org/W2587061937","https://openalex.org/W2606929478","https://openalex.org/W2619031125","https://openalex.org/W2727442359","https://openalex.org/W2741701794","https://openalex.org/W2752421236","https://openalex.org/W2764116991","https://openalex.org/W2764292139","https://openalex.org/W2771775372","https://openalex.org/W2781634489","https://openalex.org/W2953156641","https://openalex.org/W2953270392","https://openalex.org/W2956148206","https://openalex.org/W4230962320","https://openalex.org/W4250093603","https://openalex.org/W4254184394","https://openalex.org/W6726932129","https://openalex.org/W6736490050","https://openalex.org/W6744452389","https://openalex.org/W6745139841","https://openalex.org/W6764711786"],"related_works":["https://openalex.org/W2389214306","https://openalex.org/W2794559785","https://openalex.org/W4235240664","https://openalex.org/W2965083567","https://openalex.org/W1838576100","https://openalex.org/W2095886385","https://openalex.org/W2889616422","https://openalex.org/W2089704382","https://openalex.org/W1973739845","https://openalex.org/W119752240"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":3}],"updated_date":"2026-03-27T14:29:43.386196","created_date":"2025-10-10T00:00:00"}
