{"id":"https://openalex.org/W2806304760","doi":"https://doi.org/10.1093/bioinformatics/bty457","title":"Graph-guided multi-task sparse learning model: a method for identifying antigenic variants of influenza A(H3N2) virus","display_name":"Graph-guided multi-task sparse learning model: a method for identifying antigenic variants of influenza A(H3N2) virus","publication_year":2018,"publication_date":"2018-06-06","ids":{"openalex":"https://openalex.org/W2806304760","doi":"https://doi.org/10.1093/bioinformatics/bty457","mag":"2806304760","pmid":"https://pubmed.ncbi.nlm.nih.gov/29878046"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/bty457","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty457","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/35/1/77/27182861/bty457.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/35/1/77/27182861/bty457.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100657626","display_name":"Lei Han","orcid":"https://orcid.org/0000-0002-2058-8214"},"institutions":[{"id":"https://openalex.org/I2250653659","display_name":"Tencent (China)","ror":"https://ror.org/00hhjss72","country_code":"CN","type":"company","lineage":["https://openalex.org/I2250653659"]},{"id":"https://openalex.org/I99041443","display_name":"Mississippi State University","ror":"https://ror.org/0432jq872","country_code":"US","type":"education","lineage":["https://openalex.org/I4210141039","https://openalex.org/I99041443"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Lei Han","raw_affiliation_strings":["Department of Basic Science, College of Veterinary Medicine, Mississippi State University, Mississippi State, MS, USA","Tencent AI Lab, Tencent, Shenzhen, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Basic Science, College of Veterinary Medicine, Mississippi State University, Mississippi State, MS, USA","institution_ids":["https://openalex.org/I99041443"]},{"raw_affiliation_string":"Tencent AI Lab, Tencent, Shenzhen, China","institution_ids":["https://openalex.org/I2250653659"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100440363","display_name":"Lei Li","orcid":"https://orcid.org/0000-0002-8828-5199"},"institutions":[{"id":"https://openalex.org/I99041443","display_name":"Mississippi State University","ror":"https://ror.org/0432jq872","country_code":"US","type":"education","lineage":["https://openalex.org/I4210141039","https://openalex.org/I99041443"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Lei Li","raw_affiliation_strings":["Department of Basic Science, College of Veterinary Medicine, Mississippi State University, Mississippi State, MS, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Basic Science, College of Veterinary Medicine, Mississippi State University, Mississippi State, MS, USA","institution_ids":["https://openalex.org/I99041443"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024340731","display_name":"Feng Wen","orcid":"https://orcid.org/0000-0001-8790-1503"},"institutions":[{"id":"https://openalex.org/I99041443","display_name":"Mississippi State University","ror":"https://ror.org/0432jq872","country_code":"US","type":"education","lineage":["https://openalex.org/I4210141039","https://openalex.org/I99041443"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Feng Wen","raw_affiliation_strings":["Department of Basic Science, College of Veterinary Medicine, Mississippi State University, Mississippi State, MS, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Basic Science, College of Veterinary Medicine, Mississippi State University, Mississippi State, MS, USA","institution_ids":["https://openalex.org/I99041443"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037336901","display_name":"Lei Zhong","orcid":"https://orcid.org/0000-0003-1213-9627"},"institutions":[{"id":"https://openalex.org/I99041443","display_name":"Mississippi State University","ror":"https://ror.org/0432jq872","country_code":"US","type":"education","lineage":["https://openalex.org/I4210141039","https://openalex.org/I99041443"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Lei Zhong","raw_affiliation_strings":["Department of Basic Science, College of Veterinary Medicine, Mississippi State University, Mississippi State, MS, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Basic Science, College of Veterinary Medicine, Mississippi State University, Mississippi State, MS, USA","institution_ids":["https://openalex.org/I99041443"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100378792","display_name":"Tong Zhang","orcid":"https://orcid.org/0000-0002-5511-2558"},"institutions":[{"id":"https://openalex.org/I2250653659","display_name":"Tencent (China)","ror":"https://ror.org/00hhjss72","country_code":"CN","type":"company","lineage":["https://openalex.org/I2250653659"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Tong Zhang","raw_affiliation_strings":["Tencent AI Lab, Tencent, Shenzhen, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Tencent AI Lab, Tencent, Shenzhen, China","institution_ids":["https://openalex.org/I2250653659"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5038575631","display_name":"Xiu\u2010Feng Wan","orcid":"https://orcid.org/0000-0003-2629-9234"},"institutions":[{"id":"https://openalex.org/I99041443","display_name":"Mississippi State University","ror":"https://ror.org/0432jq872","country_code":"US","type":"education","lineage":["https://openalex.org/I4210141039","https://openalex.org/I99041443"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Xiu-Feng Wan","raw_affiliation_strings":["Department of Basic Science, College of Veterinary Medicine, Mississippi State University, Mississippi State, MS, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Basic Science, College of Veterinary Medicine, Mississippi State University, Mississippi State, MS, USA","institution_ids":["https://openalex.org/I99041443"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5038575631"],"corresponding_institution_ids":["https://openalex.org/I99041443"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":1.6023,"has_fulltext":false,"cited_by_count":31,"citation_normalized_percentile":{"value":0.83266276,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":"35","issue":"1","first_page":"77","last_page":"87"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10167","display_name":"Influenza Virus Research Studies","score":0.9610000252723694,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10167","display_name":"Influenza Virus Research Studies","score":0.9610000252723694,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.013000000268220901,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11243","display_name":"Respiratory viral infections research","score":0.003700000001117587,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5578189492225647},{"id":"https://openalex.org/keywords/antigenic-drift","display_name":"Antigenic drift","score":0.5150801539421082},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5017197132110596},{"id":"https://openalex.org/keywords/antigen","display_name":"Antigen","score":0.4827782213687897},{"id":"https://openalex.org/keywords/antigenic-shift","display_name":"Antigenic shift","score":0.44985780119895935},{"id":"https://openalex.org/keywords/virology","display_name":"Virology","score":0.4405461251735687},{"id":"https://openalex.org/keywords/influenza-a-virus","display_name":"Influenza A virus","score":0.4356815814971924},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3480578064918518},{"id":"https://openalex.org/keywords/virus","display_name":"Virus","score":0.3126257061958313},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.20014908909797668}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5578189492225647},{"id":"https://openalex.org/C7842527","wikidata":"https://www.wikidata.org/wiki/Q575258","display_name":"Antigenic drift","level":4,"score":0.5150801539421082},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5017197132110596},{"id":"https://openalex.org/C147483822","wikidata":"https://www.wikidata.org/wiki/Q103537","display_name":"Antigen","level":2,"score":0.4827782213687897},{"id":"https://openalex.org/C86282344","wikidata":"https://www.wikidata.org/wiki/Q575314","display_name":"Antigenic shift","level":5,"score":0.44985780119895935},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.4405461251735687},{"id":"https://openalex.org/C2777546802","wikidata":"https://www.wikidata.org/wiki/Q834390","display_name":"Influenza A virus","level":3,"score":0.4356815814971924},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3480578064918518},{"id":"https://openalex.org/C2522874641","wikidata":"https://www.wikidata.org/wiki/Q808","display_name":"Virus","level":2,"score":0.3126257061958313},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.20014908909797668}],"mesh":[{"descriptor_ui":"D000940","descriptor_name":"Antigenic Variation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000940","descriptor_name":"Antigenic Variation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000940","descriptor_name":"Antigenic Variation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000940","descriptor_name":"Antigenic Variation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000956","descriptor_name":"Antigens, Viral","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000956","descriptor_name":"Antigens, Viral","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000956","descriptor_name":"Antigens, Viral","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000956","descriptor_name":"Antigens, Viral","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007251","descriptor_name":"Influenza, Human","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007251","descriptor_name":"Influenza, Human","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007251","descriptor_name":"Influenza, Human","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007251","descriptor_name":"Influenza, Human","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007252","descriptor_name":"Influenza Vaccines","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007252","descriptor_name":"Influenza Vaccines","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007252","descriptor_name":"Influenza Vaccines","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007252","descriptor_name":"Influenza Vaccines","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009980","descriptor_name":"Influenza A virus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009980","descriptor_name":"Influenza A virus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009980","descriptor_name":"Influenza A virus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009980","descriptor_name":"Influenza A virus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019267","descriptor_name":"Hemagglutinin Glycoproteins, Influenza Virus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D019267","descriptor_name":"Hemagglutinin Glycoproteins, Influenza Virus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D019267","descriptor_name":"Hemagglutinin Glycoproteins, Influenza Virus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D019267","descriptor_name":"Hemagglutinin Glycoproteins, Influenza Virus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053122","descriptor_name":"Influenza A Virus, H3N2 Subtype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053122","descriptor_name":"Influenza A Virus, H3N2 Subtype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053122","descriptor_name":"Influenza A Virus, H3N2 Subtype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053122","descriptor_name":"Influenza A Virus, H3N2 Subtype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1093/bioinformatics/bty457","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty457","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/35/1/77/27182861/bty457.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:29878046","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29878046","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:europepmc.org:5888552","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6298058","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:repository.hkust.edu.hk:1783.1-98020","is_oa":false,"landing_page_url":"http://repository.hkust.edu.hk/ir/Record/1783.1-98020","pdf_url":null,"source":{"id":"https://openalex.org/S4306401796","display_name":"Rare & Special e-Zone (The Hong Kong University of Science and Technology)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I200769079","host_organization_name":"Hong Kong University of Science and Technology","host_organization_lineage":["https://openalex.org/I200769079"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Article"},{"id":"pmh:oai:repository.ust.hk:1783.1-98020","is_oa":false,"landing_page_url":"http://www.scopus.com/record/display.url?eid=2-s2.0-85058725850&origin=inward","pdf_url":null,"source":{"id":"https://openalex.org/S4306401796","display_name":"Rare & Special e-Zone (The Hong Kong University of Science and Technology)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I200769079","host_organization_name":"Hong Kong University of Science and Technology","host_organization_lineage":["https://openalex.org/I200769079"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Article"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/bty457","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty457","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/35/1/77/27182861/bty457.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Good health and well-being","score":0.6000000238418579,"id":"https://metadata.un.org/sdg/3"}],"awards":[{"id":"https://openalex.org/G1661923768","display_name":null,"funder_award_id":"R01AI116744","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G2371987612","display_name":null,"funder_award_id":"P20 GM103476","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G2742658953","display_name":null,"funder_award_id":"R01 AI116744","funder_id":"https://openalex.org/F4320337355","funder_display_name":"National Institute of Allergy and Infectious Diseases"},{"id":"https://openalex.org/G6386637180","display_name":null,"funder_award_id":"R01 AI155975","funder_id":"https://openalex.org/F4320337355","funder_display_name":"National Institute of Allergy and Infectious Diseases"}],"funders":[{"id":"https://openalex.org/F4320307856","display_name":"World Health Organization","ror":"https://ror.org/01f80g185"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"},{"id":"https://openalex.org/F4320337355","display_name":"National Institute of Allergy and Infectious Diseases","ror":"https://ror.org/043z4tv69"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":39,"referenced_works":["https://openalex.org/W1526257973","https://openalex.org/W1598661758","https://openalex.org/W1970714421","https://openalex.org/W1973887208","https://openalex.org/W1979158913","https://openalex.org/W1988533731","https://openalex.org/W1989060270","https://openalex.org/W1990879282","https://openalex.org/W1998591468","https://openalex.org/W2041646166","https://openalex.org/W2044054342","https://openalex.org/W2052708825","https://openalex.org/W2058144955","https://openalex.org/W2060990215","https://openalex.org/W2077124055","https://openalex.org/W2078098398","https://openalex.org/W2082260623","https://openalex.org/W2097230806","https://openalex.org/W2100556411","https://openalex.org/W2105690884","https://openalex.org/W2106396440","https://openalex.org/W2123156966","https://openalex.org/W2128442209","https://openalex.org/W2139815785","https://openalex.org/W2141337156","https://openalex.org/W2157229339","https://openalex.org/W2164655171","https://openalex.org/W2165874743","https://openalex.org/W2171288396","https://openalex.org/W2264077953","https://openalex.org/W2327300044","https://openalex.org/W2517145603","https://openalex.org/W2561460828","https://openalex.org/W2605343262","https://openalex.org/W2614049562","https://openalex.org/W3101782091","https://openalex.org/W4302548900","https://openalex.org/W6684578312","https://openalex.org/W6730601559"],"related_works":["https://openalex.org/W3166071607","https://openalex.org/W2406460005","https://openalex.org/W4252162997","https://openalex.org/W1992161679","https://openalex.org/W2006667246","https://openalex.org/W2018529206","https://openalex.org/W51717375","https://openalex.org/W2107413158","https://openalex.org/W2157229282","https://openalex.org/W2921220897"],"abstract_inverted_index":{"Motivation:":[0],"Influenza":[1],"virus":[2,19,139],"antigenic":[3,27,64,88,106,111],"variants":[4,28,112],"continue":[5],"to":[6,24,42,82,93,135],"emerge":[7],"and":[8,14,40,44,52,86,108,116,142],"cause":[9],"disease":[10],"outbreaks.":[11],"Time-consuming,":[12],"costly":[13],"middle-throughput":[15],"serologic":[16,80],"methods":[17],"using":[18,128],"isolates":[20],"are":[21,37,150,158],"routinely":[22],"used":[23],"identify":[25],"influenza":[26,94],"for":[29,63,148],"vaccine":[30],"strain":[31],"selection.":[32],"However,":[33],"the":[34,100],"resulting":[35],"data":[36,81,157],"notoriously":[38],"noisy":[39],"difficult":[41],"interpret":[43],"integrate":[45],"because":[46],"of":[47,105,110],"variations":[48],"in":[49,113],"reagents,":[50],"supplies":[51],"protocol":[53],"implementation.":[54],"A":[55],"novel":[56],"method":[57,101],"without":[58],"such":[59],"limitations":[60],"is":[61],"needed":[62],"variant":[65],"identification.":[66],"Results:":[67],"We":[68],"developed":[69,147],"a":[70,118],"Graph-Guided":[71],"Multi-Task":[72],"Sparse":[73],"Learning":[74],"(GG-MTSL)":[75],"model":[76],"that":[77],"uses":[78],"multi-sourced":[79],"learn":[83],"antigenicity-associated":[84],"mutations":[85],"infer":[87],"variants.":[89],"By":[90],"applying":[91],"GG-MTSL":[92,149],"H3N2":[95],"hemagglutinin":[96],"sequences,":[97],"we":[98],"showed":[99],"enables":[102],"rapid":[103],"characterization":[104],"profiles":[107],"identification":[109],"real":[114],"time":[115],"on":[117],"large":[119],"scale.":[120],"Furthermore,":[121],"sequences":[122],"can":[123],"be":[124],"generated":[125],"directly":[126],"by":[127],"clinical":[129],"samples,":[130],"thus":[131],"minimizing":[132],"biases":[133],"due":[134],"culture-adapted":[136],"mutation":[137],"during":[138],"isolation.":[140],"Availability":[141],"implementation:":[143],"MATLAB":[144],"source":[145],"codes":[146],"available":[151,159],"through":[152],"http://sysbio.cvm.msstate.edu/files/GG-MTSL/.":[153],"Supplementary":[154,156],"information:":[155],"at":[160],"Bioinformatics":[161],"online.":[162]},"counts_by_year":[{"year":2026,"cited_by_count":5},{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":6},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":6}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
