{"id":"https://openalex.org/W2806472597","doi":"https://doi.org/10.1093/bioinformatics/bty435","title":"TomoEED: fast edge-enhancing denoising of tomographic volumes","display_name":"TomoEED: fast edge-enhancing denoising of tomographic volumes","publication_year":2018,"publication_date":"2018-05-23","ids":{"openalex":"https://openalex.org/W2806472597","doi":"https://doi.org/10.1093/bioinformatics/bty435","mag":"2806472597","pmid":"https://pubmed.ncbi.nlm.nih.gov/29850773"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/bty435","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty435","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/21/3776/26147003/bty435.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/34/21/3776/26147003/bty435.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5003162028","display_name":"Juan Jos\u00e9 Hurtado Moreno","orcid":"https://orcid.org/0000-0002-2194-2318"},"institutions":[{"id":"https://openalex.org/I52354020","display_name":"University of Almer\u00eda","ror":"https://ror.org/003d3xx08","country_code":"ES","type":"education","lineage":["https://openalex.org/I52354020"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"J J Moreno","raw_affiliation_strings":["Department of Informatics, University of Almeria, Almeria, Spain"],"affiliations":[{"raw_affiliation_string":"Department of Informatics, University of Almeria, Almeria, Spain","institution_ids":["https://openalex.org/I52354020"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035593262","display_name":"Antonio Mart\u00ednez-S\u00e1nchez","orcid":"https://orcid.org/0000-0002-5865-2138"},"institutions":[{"id":"https://openalex.org/I4210150093","display_name":"Max Planck Institute of Biochemistry","ror":"https://ror.org/04py35477","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210150093"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"A Mart\u00ednez-S\u00e1nchez","raw_affiliation_strings":["Max-Planck Institute for Biochemistry, Martinsried, Germany"],"affiliations":[{"raw_affiliation_string":"Max-Planck Institute for Biochemistry, Martinsried, Germany","institution_ids":["https://openalex.org/I4210150093"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012911421","display_name":"Jos\u00e9 A. Mart\u00ednez","orcid":"https://orcid.org/0000-0002-7827-1818"},"institutions":[{"id":"https://openalex.org/I52354020","display_name":"University of Almer\u00eda","ror":"https://ror.org/003d3xx08","country_code":"ES","type":"education","lineage":["https://openalex.org/I52354020"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"J A Mart\u00ednez","raw_affiliation_strings":["Department of Informatics, University of Almeria, Almeria, Spain"],"affiliations":[{"raw_affiliation_string":"Department of Informatics, University of Almeria, Almeria, Spain","institution_ids":["https://openalex.org/I52354020"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007447524","display_name":"Ester M. Garz\u00f3n","orcid":"https://orcid.org/0000-0002-0568-5470"},"institutions":[{"id":"https://openalex.org/I52354020","display_name":"University of Almer\u00eda","ror":"https://ror.org/003d3xx08","country_code":"ES","type":"education","lineage":["https://openalex.org/I52354020"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"E M Garz\u00f3n","raw_affiliation_strings":["Department of Informatics, University of Almeria, Almeria, Spain"],"affiliations":[{"raw_affiliation_string":"Department of Informatics, University of Almeria, Almeria, Spain","institution_ids":["https://openalex.org/I52354020"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5044231334","display_name":"Jos\u00e9\u2010Jes\u00fas Fern\u00e1ndez","orcid":"https://orcid.org/0000-0003-2222-3355"},"institutions":[{"id":"https://openalex.org/I134820265","display_name":"Consejo Superior de Investigaciones Cient\u00edficas","ror":"https://ror.org/02gfc7t72","country_code":"ES","type":"funder","lineage":["https://openalex.org/I134820265"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"J J Fern\u00e1ndez","raw_affiliation_strings":["Spanish National Research Council (CNB-CSIC), Madrid, Spain"],"affiliations":[{"raw_affiliation_string":"Spanish National Research Council (CNB-CSIC), Madrid, Spain","institution_ids":["https://openalex.org/I134820265"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5007447524","https://openalex.org/A5044231334"],"corresponding_institution_ids":["https://openalex.org/I134820265","https://openalex.org/I52354020"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":1.258,"has_fulltext":false,"cited_by_count":24,"citation_normalized_percentile":{"value":0.80312072,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"34","issue":"21","first_page":"3776","last_page":"3778"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11304","display_name":"Advanced Neuroimaging Techniques and Applications","score":0.9921000003814697,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11304","display_name":"Advanced Neuroimaging Techniques and Applications","score":0.9921000003814697,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9793999791145325,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9710999727249146,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8107061386108398},{"id":"https://openalex.org/keywords/noise-reduction","display_name":"Noise reduction","score":0.6846489906311035},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.6202101707458496},{"id":"https://openalex.org/keywords/filter","display_name":"Filter (signal processing)","score":0.6113651990890503},{"id":"https://openalex.org/keywords/noise","display_name":"Noise (video)","score":0.5692725777626038},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.495583176612854},{"id":"https://openalex.org/keywords/enhanced-data-rates-for-gsm-evolution","display_name":"Enhanced Data Rates for GSM Evolution","score":0.4896240830421448},{"id":"https://openalex.org/keywords/anisotropic-diffusion","display_name":"Anisotropic diffusion","score":0.4715709090232849},{"id":"https://openalex.org/keywords/computational-science","display_name":"Computational science","score":0.4602052569389343},{"id":"https://openalex.org/keywords/emphasis","display_name":"Emphasis (telecommunications)","score":0.4587469696998596},{"id":"https://openalex.org/keywords/reduction","display_name":"Reduction (mathematics)","score":0.4427967369556427},{"id":"https://openalex.org/keywords/computer-engineering","display_name":"Computer engineering","score":0.4133976101875305},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.3457357883453369},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.32817673683166504},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.2425084114074707},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.1698932647705078},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.14305999875068665},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.1179981529712677},{"id":"https://openalex.org/keywords/telecommunications","display_name":"Telecommunications","score":0.11162644624710083},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.06670886278152466}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8107061386108398},{"id":"https://openalex.org/C163294075","wikidata":"https://www.wikidata.org/wiki/Q581861","display_name":"Noise reduction","level":2,"score":0.6846489906311035},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.6202101707458496},{"id":"https://openalex.org/C106131492","wikidata":"https://www.wikidata.org/wiki/Q3072260","display_name":"Filter (signal processing)","level":2,"score":0.6113651990890503},{"id":"https://openalex.org/C99498987","wikidata":"https://www.wikidata.org/wiki/Q2210247","display_name":"Noise (video)","level":3,"score":0.5692725777626038},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.495583176612854},{"id":"https://openalex.org/C162307627","wikidata":"https://www.wikidata.org/wiki/Q204833","display_name":"Enhanced Data Rates for GSM Evolution","level":2,"score":0.4896240830421448},{"id":"https://openalex.org/C203504353","wikidata":"https://www.wikidata.org/wiki/Q4765461","display_name":"Anisotropic diffusion","level":3,"score":0.4715709090232849},{"id":"https://openalex.org/C459310","wikidata":"https://www.wikidata.org/wiki/Q117801","display_name":"Computational science","level":1,"score":0.4602052569389343},{"id":"https://openalex.org/C177454536","wikidata":"https://www.wikidata.org/wiki/Q578290","display_name":"Emphasis (telecommunications)","level":2,"score":0.4587469696998596},{"id":"https://openalex.org/C111335779","wikidata":"https://www.wikidata.org/wiki/Q3454686","display_name":"Reduction (mathematics)","level":2,"score":0.4427967369556427},{"id":"https://openalex.org/C113775141","wikidata":"https://www.wikidata.org/wiki/Q428691","display_name":"Computer engineering","level":1,"score":0.4133976101875305},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.3457357883453369},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.32817673683166504},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.2425084114074707},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.1698932647705078},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.14305999875068665},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.1179981529712677},{"id":"https://openalex.org/C76155785","wikidata":"https://www.wikidata.org/wiki/Q418","display_name":"Telecommunications","level":1,"score":0.11162644624710083},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.06670886278152466},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003201","descriptor_name":"Computers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003201","descriptor_name":"Computers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003201","descriptor_name":"Computers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014057","descriptor_name":"Tomography, X-Ray Computed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014057","descriptor_name":"Tomography, X-Ray Computed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014057","descriptor_name":"Tomography, X-Ray Computed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/bty435","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty435","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/21/3776/26147003/bty435.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:29850773","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29850773","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pure.mpg.de:item_3022040","is_oa":false,"landing_page_url":"http://hdl.handle.net/21.11116/0000-0002-EE4A-0","pdf_url":null,"source":{"id":"https://openalex.org/S4306400654","display_name":"MPG.PuRe (Max Planck Society)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I149899117","host_organization_name":"Max Planck Society","host_organization_lineage":["https://openalex.org/I149899117"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/bty435","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty435","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/21/3776/26147003/bty435.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G5411771654","display_name":null,"funder_award_id":"TIN2015-66680","funder_id":"https://openalex.org/F4320308798","funder_display_name":"Albert Ellis Institute"},{"id":"https://openalex.org/G7964577137","display_name":null,"funder_award_id":"SAF2017-84565-R","funder_id":"https://openalex.org/F4320308798","funder_display_name":"Albert Ellis Institute"}],"funders":[{"id":"https://openalex.org/F4320308798","display_name":"Albert Ellis Institute","ror":"https://ror.org/0027wxf59"},{"id":"https://openalex.org/F4320310214","display_name":"Fundaci\u00f3n Ram\u00f3n Areces","ror":"https://ror.org/04ra91131"},{"id":"https://openalex.org/F4320321595","display_name":"Federaci\u00f3n Espa\u00f1ola de Enfermedades Raras","ror":"https://ror.org/0348bpk17"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2806472597.pdf","grobid_xml":"https://content.openalex.org/works/W2806472597.grobid-xml"},"referenced_works_count":9,"referenced_works":["https://openalex.org/W1527543056","https://openalex.org/W1966960361","https://openalex.org/W2029101220","https://openalex.org/W2034184519","https://openalex.org/W2067987159","https://openalex.org/W2083019919","https://openalex.org/W2091002254","https://openalex.org/W2115251427","https://openalex.org/W2345192897"],"related_works":["https://openalex.org/W2055105357","https://openalex.org/W2153819599","https://openalex.org/W2255426644","https://openalex.org/W2072124641","https://openalex.org/W2167093538","https://openalex.org/W2018956713","https://openalex.org/W2475096862","https://openalex.org/W2379232376","https://openalex.org/W1992788508","https://openalex.org/W2007919187"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":5},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":5},{"year":2019,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
