{"id":"https://openalex.org/W2804493386","doi":"https://doi.org/10.1093/bioinformatics/bty408","title":"PANDA-view: an easy-to-use tool for statistical analysis and visualization of quantitative proteomics data","display_name":"PANDA-view: an easy-to-use tool for statistical analysis and visualization of quantitative proteomics data","publication_year":2018,"publication_date":"2018-05-17","ids":{"openalex":"https://openalex.org/W2804493386","doi":"https://doi.org/10.1093/bioinformatics/bty408","mag":"2804493386","pmid":"https://pubmed.ncbi.nlm.nih.gov/29790911"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/bty408","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty408","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/20/3594/26024427/bty408.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/34/20/3594/26024427/bty408.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5041872254","display_name":"Cheng Chang","orcid":"https://orcid.org/0000-0002-0361-2438"},"institutions":[{"id":"https://openalex.org/I4210149540","display_name":"Beijing Proteome Research Center","ror":"https://ror.org/05pp5b412","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210149540"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Cheng Chang","raw_affiliation_strings":["State Key Laboratory of Proteomics, Beijing Proteome Research Center, Beijing Institute of Lifeomics, National Center for Protein Sciences (Beijing), Beijing, People\u2019s Republic of China","State Key Laboratory of Proteomics, Beijing Proteome Research Center, Beijing Institute of Lifeomics, National Center for Protein Sciences (Beijing), Beijing, People's Republic of China"],"raw_orcid":"https://orcid.org/0000-0002-0361-2438","affiliations":[{"raw_affiliation_string":"State Key Laboratory of Proteomics, Beijing Proteome Research Center, Beijing Institute of Lifeomics, National Center for Protein Sciences (Beijing), Beijing, People\u2019s Republic of China","institution_ids":["https://openalex.org/I4210149540"]},{"raw_affiliation_string":"State Key Laboratory of Proteomics, Beijing Proteome Research Center, Beijing Institute of Lifeomics, National Center for Protein Sciences (Beijing), Beijing, People's Republic of China","institution_ids":["https://openalex.org/I4210149540"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056340052","display_name":"Kaikun Xu","orcid":"https://orcid.org/0000-0002-3979-8780"},"institutions":[{"id":"https://openalex.org/I4210149540","display_name":"Beijing Proteome Research Center","ror":"https://ror.org/05pp5b412","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210149540"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Kaikun Xu","raw_affiliation_strings":["State Key Laboratory of Proteomics, Beijing Proteome Research Center, Beijing Institute of Lifeomics, National Center for Protein Sciences (Beijing), Beijing, People\u2019s Republic of China","State Key Laboratory of Proteomics, Beijing Proteome Research Center, Beijing Institute of Lifeomics, National Center for Protein Sciences (Beijing), Beijing, People's Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"State Key Laboratory of Proteomics, Beijing Proteome Research Center, Beijing Institute of Lifeomics, National Center for Protein Sciences (Beijing), Beijing, People\u2019s Republic of China","institution_ids":["https://openalex.org/I4210149540"]},{"raw_affiliation_string":"State Key Laboratory of Proteomics, Beijing Proteome Research Center, Beijing Institute of Lifeomics, National Center for Protein Sciences (Beijing), Beijing, People's Republic of China","institution_ids":["https://openalex.org/I4210149540"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040470147","display_name":"Chaoping Guo","orcid":null},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210128818","display_name":"Institute of Software","ror":"https://ror.org/033dfsn42","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210128818"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Chaoping Guo","raw_affiliation_strings":["Beijing Key Laboratory of Human Computer Interactions, Institute of Software, Chinese Academy of Sciences, Beijing, People\u2019s Republic of China","Beijing Key Laboratory of Human Computer Interactions, Institute of Software, Chinese Academy of Sciences, Beijing, People's Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Beijing Key Laboratory of Human Computer Interactions, Institute of Software, Chinese Academy of Sciences, Beijing, People\u2019s Republic of China","institution_ids":["https://openalex.org/I19820366","https://openalex.org/I4210128818"]},{"raw_affiliation_string":"Beijing Key Laboratory of Human Computer Interactions, Institute of Software, Chinese Academy of Sciences, Beijing, People's Republic of China","institution_ids":["https://openalex.org/I19820366","https://openalex.org/I4210128818"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Jinxia Wang","orcid":null},"institutions":[{"id":"https://openalex.org/I4210149540","display_name":"Beijing Proteome Research Center","ror":"https://ror.org/05pp5b412","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210149540"]},{"id":"https://openalex.org/I4210152216","display_name":"Guangdong Food and Drug Vocational College","ror":"https://ror.org/04xhre718","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210152216"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jinxia Wang","raw_affiliation_strings":["Drug Research and Development Center, Shandong Drug and Food Vocational College, Weihai, People\u2019s Republic of China","State Key Laboratory of Proteomics, Beijing Proteome Research Center, Beijing Institute of Lifeomics, National Center for Protein Sciences (Beijing), Beijing, People\u2019s Republic of China","State Key Laboratory of Proteomics, Beijing Proteome Research Center, Beijing Institute of Lifeomics, National Center for Protein Sciences (Beijing), Beijing, People's Republic of China","Drug Research and Development Center, Shandong Drug and Food Vocational College, Weihai, People's Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Drug Research and Development Center, Shandong Drug and Food Vocational College, Weihai, People\u2019s Republic of China","institution_ids":["https://openalex.org/I4210152216"]},{"raw_affiliation_string":"State Key Laboratory of Proteomics, Beijing Proteome Research Center, Beijing Institute of Lifeomics, National Center for Protein Sciences (Beijing), Beijing, People\u2019s Republic of China","institution_ids":["https://openalex.org/I4210149540"]},{"raw_affiliation_string":"State Key Laboratory of Proteomics, Beijing Proteome Research Center, Beijing Institute of Lifeomics, National Center for Protein Sciences (Beijing), Beijing, People's Republic of China","institution_ids":["https://openalex.org/I4210149540"]},{"raw_affiliation_string":"Drug Research and Development Center, Shandong Drug and Food Vocational College, Weihai, People's Republic of China","institution_ids":["https://openalex.org/I4210152216"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101706875","display_name":"Qi Yan","orcid":"https://orcid.org/0000-0001-6725-5399"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210128818","display_name":"Institute of Software","ror":"https://ror.org/033dfsn42","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210128818"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qi Yan","raw_affiliation_strings":["Beijing Key Laboratory of Human Computer Interactions, Institute of Software, Chinese Academy of Sciences, Beijing, People\u2019s Republic of China","Beijing Key Laboratory of Human Computer Interactions, Institute of Software, Chinese Academy of Sciences, Beijing, People's Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Beijing Key Laboratory of Human Computer Interactions, Institute of Software, Chinese Academy of Sciences, Beijing, People\u2019s Republic of China","institution_ids":["https://openalex.org/I19820366","https://openalex.org/I4210128818"]},{"raw_affiliation_string":"Beijing Key Laboratory of Human Computer Interactions, Institute of Software, Chinese Academy of Sciences, Beijing, People's Republic of China","institution_ids":["https://openalex.org/I19820366","https://openalex.org/I4210128818"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100409955","display_name":"Jian Zhang","orcid":"https://orcid.org/0000-0002-4021-8771"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210128818","display_name":"Institute of Software","ror":"https://ror.org/033dfsn42","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210128818"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jian Zhang","raw_affiliation_strings":["Beijing Key Laboratory of Human Computer Interactions, Institute of Software, Chinese Academy of Sciences, Beijing, People\u2019s Republic of China","Beijing Key Laboratory of Human Computer Interactions, Institute of Software, Chinese Academy of Sciences, Beijing, People's Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Beijing Key Laboratory of Human Computer Interactions, Institute of Software, Chinese Academy of Sciences, Beijing, People\u2019s Republic of China","institution_ids":["https://openalex.org/I19820366","https://openalex.org/I4210128818"]},{"raw_affiliation_string":"Beijing Key Laboratory of Human Computer Interactions, Institute of Software, Chinese Academy of Sciences, Beijing, People's Republic of China","institution_ids":["https://openalex.org/I19820366","https://openalex.org/I4210128818"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091436402","display_name":"Fuchu He","orcid":"https://orcid.org/0000-0002-8571-2351"},"institutions":[{"id":"https://openalex.org/I4210149540","display_name":"Beijing Proteome Research Center","ror":"https://ror.org/05pp5b412","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210149540"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Fuchu He","raw_affiliation_strings":["State Key Laboratory of Proteomics, Beijing Proteome Research Center, Beijing Institute of Lifeomics, National Center for Protein Sciences (Beijing), Beijing, People\u2019s Republic of China","State Key Laboratory of Proteomics, Beijing Proteome Research Center, Beijing Institute of Lifeomics, National Center for Protein Sciences (Beijing), Beijing, People's Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"State Key Laboratory of Proteomics, Beijing Proteome Research Center, Beijing Institute of Lifeomics, National Center for Protein Sciences (Beijing), Beijing, People\u2019s Republic of China","institution_ids":["https://openalex.org/I4210149540"]},{"raw_affiliation_string":"State Key Laboratory of Proteomics, Beijing Proteome Research Center, Beijing Institute of Lifeomics, National Center for Protein Sciences (Beijing), Beijing, People's Republic of China","institution_ids":["https://openalex.org/I4210149540"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100765277","display_name":"Yunping Zhu","orcid":"https://orcid.org/0000-0002-7320-7411"},"institutions":[{"id":"https://openalex.org/I4210149540","display_name":"Beijing Proteome Research Center","ror":"https://ror.org/05pp5b412","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210149540"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Yunping Zhu","raw_affiliation_strings":["State Key Laboratory of Proteomics, Beijing Proteome Research Center, Beijing Institute of Lifeomics, National Center for Protein Sciences (Beijing), Beijing, People\u2019s Republic of China","State Key Laboratory of Proteomics, Beijing Proteome Research Center, Beijing Institute of Lifeomics, National Center for Protein Sciences (Beijing), Beijing, People's Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"State Key Laboratory of Proteomics, Beijing Proteome Research Center, Beijing Institute of Lifeomics, National Center for Protein Sciences (Beijing), Beijing, People\u2019s Republic of China","institution_ids":["https://openalex.org/I4210149540"]},{"raw_affiliation_string":"State Key Laboratory of Proteomics, Beijing Proteome Research Center, Beijing Institute of Lifeomics, National Center for Protein Sciences (Beijing), Beijing, People's Republic of China","institution_ids":["https://openalex.org/I4210149540"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5041872254","https://openalex.org/A5100765277"],"corresponding_institution_ids":["https://openalex.org/I4210149540"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":4.1721,"has_fulltext":true,"cited_by_count":45,"citation_normalized_percentile":{"value":0.95895817,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":96,"max":99},"biblio":{"volume":"34","issue":"20","first_page":"3594","last_page":"3596"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9013000130653381,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9013000130653381,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.03319999948143959,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12867","display_name":"Advanced Biosensing Techniques and Applications","score":0.008200000040233135,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7023271322250366},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.691006600856781},{"id":"https://openalex.org/keywords/statistical-analysis","display_name":"Statistical analysis","score":0.5370122194290161},{"id":"https://openalex.org/keywords/proteomics","display_name":"Proteomics","score":0.46539175510406494},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.45253121852874756},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.44313275814056396},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3910568356513977},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.34661129117012024},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.16504278779029846},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.11965712904930115},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.11821511387825012},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.07871055603027344}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7023271322250366},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.691006600856781},{"id":"https://openalex.org/C2986587452","wikidata":"https://www.wikidata.org/wiki/Q938438","display_name":"Statistical analysis","level":2,"score":0.5370122194290161},{"id":"https://openalex.org/C46111723","wikidata":"https://www.wikidata.org/wiki/Q471857","display_name":"Proteomics","level":3,"score":0.46539175510406494},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.45253121852874756},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.44313275814056396},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3910568356513977},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.34661129117012024},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.16504278779029846},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.11965712904930115},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.11821511387825012},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.07871055603027344},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D003627","descriptor_name":"Data Interpretation, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003627","descriptor_name":"Data Interpretation, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003627","descriptor_name":"Data Interpretation, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/bty408","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty408","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/20/3594/26024427/bty408.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:29790911","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29790911","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:europepmc.org:5137000","is_oa":true,"landing_page_url":"http://europepmc.org/pmc/articles/PMC6184437","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:6184437","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6184437","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/bty408","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty408","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/20/3594/26024427/bty408.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1053236471","display_name":null,"funder_award_id":"2017YFA0505002","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"},{"id":"https://openalex.org/G1193943778","display_name":null,"funder_award_id":"2017YFC0906602","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"},{"id":"https://openalex.org/G3280040305","display_name":null,"funder_award_id":"2017YFC0906602","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3529746609","display_name":null,"funder_award_id":"21605159","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5292479265","display_name":null,"funder_award_id":"2017YFA0505002","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2804493386.pdf","grobid_xml":"https://content.openalex.org/works/W2804493386.grobid-xml"},"referenced_works_count":15,"referenced_works":["https://openalex.org/W1596515083","https://openalex.org/W2050758433","https://openalex.org/W2061554433","https://openalex.org/W2110065044","https://openalex.org/W2130091718","https://openalex.org/W2155446916","https://openalex.org/W2157795344","https://openalex.org/W2463195069","https://openalex.org/W2524808906","https://openalex.org/W2621121417","https://openalex.org/W2623259478","https://openalex.org/W2767405596","https://openalex.org/W2890676716","https://openalex.org/W4294107304","https://openalex.org/W6727679459"],"related_works":["https://openalex.org/W2068608913","https://openalex.org/W3124914020","https://openalex.org/W1488408180","https://openalex.org/W2141033859","https://openalex.org/W2156434174","https://openalex.org/W2071701083","https://openalex.org/W2383687187","https://openalex.org/W2081517010","https://openalex.org/W2121496884","https://openalex.org/W2387910809"],"abstract_inverted_index":{"Summary:":[0],"Compared":[1],"with":[2],"the":[3,34,85,105],"numerous":[4],"software":[5],"tools":[6,21],"developed":[7],"for":[8,22,48,101],"identification":[9],"and":[10,26,52,58,78,110],"quantification":[11],"of":[12,19,54,66,104],"-omics":[13,39,60],"data,":[14,40],"there":[15],"remains":[16],"a":[17],"lack":[18],"suitable":[20],"both":[23,49],"downstream":[24],"analysis":[25,51,67],"data":[27,57,88,121],"visualization.":[28],"To":[29],"help":[30],"researchers":[31],"better":[32],"understand":[33],"biological":[35],"meanings":[36],"in":[37],"their":[38],"we":[41],"present":[42],"an":[43,92],"easy-to-use":[44],"tool,":[45],"named":[46],"PANDA-view,":[47],"statistical":[50,75],"visualization":[53,89],"quantitative":[55,106],"proteomics":[56,107],"other":[59],"data.":[61,108],"PANDA-view":[62,112],"contains":[63],"various":[64],"kinds":[65],"methods":[68,90],"such":[69],"as":[70,82,84],"normalization,":[71],"missing":[72],"value":[73],"imputation,":[74],"tests,":[76],"clustering":[77],"principal":[79],"component":[80],"analysis,":[81],"well":[83],"most":[86],"commonly-used":[87],"including":[91],"interactive":[93],"volcano":[94],"plot.":[95],"Additionally,":[96],"it":[97],"provides":[98],"user-friendly":[99],"interfaces":[100],"protein-peptide-spectrum":[102],"representation":[103],"Availability":[109],"implementation:":[111],"is":[113],"freely":[114],"available":[115,123],"at":[116,124],"https://sourceforge.net/projects/panda-view/.":[117],"Supplementary":[118,120],"information:":[119],"are":[122],"Bioinformatics":[125],"online.":[126]},"counts_by_year":[{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":7},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":13},{"year":2020,"cited_by_count":6},{"year":2019,"cited_by_count":8},{"year":2018,"cited_by_count":3}],"updated_date":"2026-07-27T08:26:11.824852","created_date":"2025-10-10T00:00:00"}
