{"id":"https://openalex.org/W2800450994","doi":"https://doi.org/10.1093/bioinformatics/bty366","title":"Jwalk and MNXL web server: model validation using restraints from crosslinking mass spectrometry","display_name":"Jwalk and MNXL web server: model validation using restraints from crosslinking mass spectrometry","publication_year":2018,"publication_date":"2018-05-03","ids":{"openalex":"https://openalex.org/W2800450994","doi":"https://doi.org/10.1093/bioinformatics/bty366","mag":"2800450994","pmid":"https://pubmed.ncbi.nlm.nih.gov/29741581"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/bty366","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty366","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/20/3584/26024434/bty366.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/34/20/3584/26024434/bty366.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5067217426","display_name":"Joshua Matthew Allen Bullock","orcid":null},"institutions":[{"id":"https://openalex.org/I98259816","display_name":"Birkbeck, University of London","ror":"https://ror.org/02mb95055","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I98259816"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Joshua M A Bullock","raw_affiliation_strings":["Institute for Structural and Molecular Biology, Birkbeck College, University of London, London, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Structural and Molecular Biology, Birkbeck College, University of London, London, UK","institution_ids":["https://openalex.org/I98259816"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020815652","display_name":"Konstantinos Thalassinos","orcid":"https://orcid.org/0000-0001-5072-8428"},"institutions":[{"id":"https://openalex.org/I124357947","display_name":"University of London","ror":"https://ror.org/04cw6st05","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947"]},{"id":"https://openalex.org/I4210157240","display_name":"Institute of Structural and Molecular Biology","ror":"https://ror.org/05wsetc54","country_code":"GB","type":"facility","lineage":["https://openalex.org/I124357947","https://openalex.org/I124357947","https://openalex.org/I4210157240","https://openalex.org/I45129253","https://openalex.org/I98259816"]},{"id":"https://openalex.org/I45129253","display_name":"University College London","ror":"https://ror.org/02jx3x895","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I45129253"]},{"id":"https://openalex.org/I98259816","display_name":"Birkbeck, University of London","ror":"https://ror.org/02mb95055","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I98259816"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Konstantinos Thalassinos","raw_affiliation_strings":["Institute for Structural and Molecular Biology, Birkbeck College, University of London, London, UK","Institute for Structural and Molecular Biology, UCL, University of London, London, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Structural and Molecular Biology, Birkbeck College, University of London, London, UK","institution_ids":["https://openalex.org/I98259816"]},{"raw_affiliation_string":"Institute for Structural and Molecular Biology, UCL, University of London, London, UK","institution_ids":["https://openalex.org/I124357947","https://openalex.org/I4210157240","https://openalex.org/I45129253"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5067226213","display_name":"Maya Topf","orcid":"https://orcid.org/0000-0002-8185-1215"},"institutions":[{"id":"https://openalex.org/I98259816","display_name":"Birkbeck, University of London","ror":"https://ror.org/02mb95055","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I98259816"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Maya Topf","raw_affiliation_strings":["Institute for Structural and Molecular Biology, Birkbeck College, University of London, London, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Structural and Molecular Biology, Birkbeck College, University of London, London, UK","institution_ids":["https://openalex.org/I98259816"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5067217426","https://openalex.org/A5067226213"],"corresponding_institution_ids":["https://openalex.org/I98259816"],"apc_list":{"value":3989,"currency":"USD","value_usd":3989},"apc_paid":{"value":3989,"currency":"USD","value_usd":3989},"fwci":2.4643,"has_fulltext":true,"cited_by_count":40,"citation_normalized_percentile":{"value":0.89336219,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":93,"max":99},"biblio":{"volume":"34","issue":"20","first_page":"3584","last_page":"3585"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10683","display_name":"Mass Spectrometry Techniques and Applications","score":0.8313999772071838,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10683","display_name":"Mass Spectrometry Techniques and Applications","score":0.8313999772071838,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.13500000536441803,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.013100000098347664,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7201903462409973},{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.6549899578094482},{"id":"https://openalex.org/keywords/mass-spectrometry","display_name":"Mass spectrometry","score":0.5603592991828918},{"id":"https://openalex.org/keywords/source-code","display_name":"Source code","score":0.5394395589828491},{"id":"https://openalex.org/keywords/code","display_name":"Code (set theory)","score":0.5235490202903748},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.5173432230949402},{"id":"https://openalex.org/keywords/filter","display_name":"Filter (signal processing)","score":0.5127557516098022},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.5027725696563721},{"id":"https://openalex.org/keywords/quality","display_name":"Quality (philosophy)","score":0.4545426368713379},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3909437656402588},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.2812584936618805},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.22810429334640503},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.2142486274242401},{"id":"https://openalex.org/keywords/chromatography","display_name":"Chromatography","score":0.18887099623680115},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.1664493978023529},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.14011195302009583}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7201903462409973},{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.6549899578094482},{"id":"https://openalex.org/C162356407","wikidata":"https://www.wikidata.org/wiki/Q180809","display_name":"Mass spectrometry","level":2,"score":0.5603592991828918},{"id":"https://openalex.org/C43126263","wikidata":"https://www.wikidata.org/wiki/Q128751","display_name":"Source code","level":2,"score":0.5394395589828491},{"id":"https://openalex.org/C2776760102","wikidata":"https://www.wikidata.org/wiki/Q5139990","display_name":"Code (set theory)","level":3,"score":0.5235490202903748},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.5173432230949402},{"id":"https://openalex.org/C106131492","wikidata":"https://www.wikidata.org/wiki/Q3072260","display_name":"Filter (signal processing)","level":2,"score":0.5127557516098022},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.5027725696563721},{"id":"https://openalex.org/C2779530757","wikidata":"https://www.wikidata.org/wiki/Q1207505","display_name":"Quality (philosophy)","level":2,"score":0.4545426368713379},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3909437656402588},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.2812584936618805},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.22810429334640503},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.2142486274242401},{"id":"https://openalex.org/C43617362","wikidata":"https://www.wikidata.org/wiki/Q170050","display_name":"Chromatography","level":1,"score":0.18887099623680115},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.1664493978023529},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.14011195302009583},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012997","descriptor_name":"Solvents","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012997","descriptor_name":"Solvents","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012997","descriptor_name":"Solvents","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012997","descriptor_name":"Solvents","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D046911","descriptor_name":"Macromolecular Substances","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D046911","descriptor_name":"Macromolecular Substances","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D046911","descriptor_name":"Macromolecular Substances","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D046911","descriptor_name":"Macromolecular Substances","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false}],"locations_count":6,"locations":[{"id":"doi:10.1093/bioinformatics/bty366","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty366","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/20/3584/26024434/bty366.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:29741581","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29741581","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":"Journal Article"},{"id":"pmh:oai:eprints.bbk.ac.uk.oai2:22356","is_oa":false,"landing_page_url":"https://eprints.bbk.ac.uk/id/eprint/22356/1/22356.pdf","pdf_url":"https://eprints.bbk.ac.uk/id/eprint/22356/1/22356.pdf","source":{"id":"https://openalex.org/S4306400465","display_name":"BIROn (Birkbeck, University of London)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I98259816","host_organization_name":"Birkbeck, University of London","host_organization_lineage":["https://openalex.org/I98259816"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":null,"raw_type":"Article"},{"id":"pmh:oai:europepmc.org:5137042","is_oa":true,"landing_page_url":"http://europepmc.org/pmc/articles/PMC6184817","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:6184817","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6184817","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:eprints.ucl.ac.uk.OAI2:10053221","is_oa":false,"landing_page_url":"https://discovery.ucl.ac.uk/id/eprint/10053221/","pdf_url":null,"source":{"id":"https://openalex.org/S4306400024","display_name":"UCL Discovery (University College London)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I45129253","host_organization_name":"University College London","host_organization_lineage":["https://openalex.org/I45129253"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics , 34 (20) pp. 3584-3585. (2018)","raw_type":"Article"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/bty366","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty366","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/20/3584/26024434/bty366.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1809679859","display_name":"An integrative approach to deciphering the entry process in Herpesviruses","funder_award_id":"MR/M019292/1","funder_id":"https://openalex.org/F4320334626","funder_display_name":"Medical Research Council"},{"id":"https://openalex.org/G4281208371","display_name":"Tools for Generating and Assessing Pseudo-atomic Models from 3D Electron Microscopy Maps of Macromolecular Assemblies.","funder_award_id":"BB/K01692X/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G619492937","display_name":null,"funder_award_id":"1350971","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G7346818667","display_name":null,"funder_award_id":"MR/M019292/1","funder_id":"https://openalex.org/F4320334626","funder_display_name":"Medical Research Council"},{"id":"https://openalex.org/G8429913931","display_name":null,"funder_award_id":"BB/K01692X/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G8626843182","display_name":null,"funder_award_id":"MR/N009614/1","funder_id":"https://openalex.org/F4320334626","funder_display_name":"Medical Research Council"}],"funders":[{"id":"https://openalex.org/F4320334626","display_name":"Medical Research Council","ror":"https://ror.org/03x94j517"},{"id":"https://openalex.org/F4320334629","display_name":"Biotechnology and Biological Sciences Research Council","ror":"https://ror.org/00cwqg982"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2800450994.pdf","grobid_xml":"https://content.openalex.org/works/W2800450994.grobid-xml"},"referenced_works_count":7,"referenced_works":["https://openalex.org/W2011703027","https://openalex.org/W2086674472","https://openalex.org/W2120508443","https://openalex.org/W2343212594","https://openalex.org/W2347156038","https://openalex.org/W2760627581","https://openalex.org/W2883755802"],"related_works":["https://openalex.org/W1990246946","https://openalex.org/W2082305538","https://openalex.org/W2135225892","https://openalex.org/W2085763662","https://openalex.org/W2492580457","https://openalex.org/W2005719253","https://openalex.org/W204938838","https://openalex.org/W2037161592","https://openalex.org/W2848875961","https://openalex.org/W3081644756"],"abstract_inverted_index":{"Motivation:":[0],"Crosslinking":[1],"Mass":[2],"Spectrometry":[3],"generates":[4],"restraints":[5,74],"that":[6],"can":[7],"be":[8],"used":[9],"to":[10,22,34,44,85],"model":[11],"proteins":[12],"and":[13,42,61,97,101,109],"protein":[14,71],"complexes.":[15],"Previously,":[16],"we":[17,57],"have":[18],"developed":[19],"two":[20],"methods,":[21],"help":[23],"users":[24],"achieve":[25],"better":[26],"modelling":[27],"performance":[28],"from":[29,75,107],"their":[30],"crosslinking":[31],"restraints:":[32],"Jwalk,":[33],"estimate":[35],"solvent":[36],"accessible":[37],"distances":[38],"between":[39],"crosslinked":[40],"residues":[41],"MNXL,":[43],"assess":[45],"the":[46,49,59,66,82,93],"quality":[47],"of":[48,68,89],"models":[50,72,87],"based":[51],"on":[52],"these":[53],"distances.":[54],"Results:":[55],"Here,":[56],"present":[58],"Jwalk":[60],"MNXL":[62,83],"webservers,":[63],"which":[64],"streamline":[65],"process":[67],"validating":[69],"monomeric":[70],"using":[73,81],"crosslinks.":[76],"We":[77],"demonstrate":[78],"this":[79],"by":[80],"server":[84],"filter":[86],"made":[88],"varying":[90],"quality,":[91],"selecting":[92],"most":[94],"native-like.":[95],"Availability":[96],"implementation:":[98],"The":[99],"webserver":[100],"source":[102],"code":[103],"are":[104,115],"freely":[105],"available":[106,116],"jwalk.ismb.lon.ac.uk":[108],"mnxl.ismb.lon.ac.uk.":[110],"Supplementary":[111,113],"information:":[112],"data":[114],"at":[117],"Bioinformatics":[118],"online.":[119]},"counts_by_year":[{"year":2026,"cited_by_count":4},{"year":2025,"cited_by_count":6},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":13},{"year":2019,"cited_by_count":4}],"updated_date":"2026-09-11T09:22:31.653822","created_date":"2025-10-10T00:00:00"}
