{"id":"https://openalex.org/W2801707406","doi":"https://doi.org/10.1093/bioinformatics/bty335","title":"Covariate-adjusted heatmaps for visualizing biological data via correlation decomposition","display_name":"Covariate-adjusted heatmaps for visualizing biological data via correlation decomposition","publication_year":2018,"publication_date":"2018-04-25","ids":{"openalex":"https://openalex.org/W2801707406","doi":"https://doi.org/10.1093/bioinformatics/bty335","mag":"2801707406","pmid":"https://pubmed.ncbi.nlm.nih.gov/29718246"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/bty335","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty335","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101923340","display_name":"Hanming Wu","orcid":"https://orcid.org/0000-0002-8424-4904"},"institutions":[{"id":"https://openalex.org/I99613584","display_name":"National Taipei University","ror":"https://ror.org/03e29r284","country_code":"TW","type":"education","lineage":["https://openalex.org/I99613584"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Han-Ming Wu","raw_affiliation_strings":["Department of Statistics, National Taipei University, New Taipei City, Taiwan, R.O.C"],"affiliations":[{"raw_affiliation_string":"Department of Statistics, National Taipei University, New Taipei City, Taiwan, R.O.C","institution_ids":["https://openalex.org/I99613584"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103054994","display_name":"Yin-Jing Tien","orcid":"https://orcid.org/0000-0001-6472-3337"},"institutions":[{"id":"https://openalex.org/I3141939062","display_name":"Institute for Information Industry","ror":"https://ror.org/01d8kr740","country_code":"TW","type":"nonprofit","lineage":["https://openalex.org/I3141939062"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Yin-Jing Tien","raw_affiliation_strings":["Digital Transformation Institute, Institute for Information Industry, Taipei, Taiwan, R.O.C"],"affiliations":[{"raw_affiliation_string":"Digital Transformation Institute, Institute for Information Industry, Taipei, Taiwan, R.O.C","institution_ids":["https://openalex.org/I3141939062"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011719007","display_name":"Meng\u2010Ru Ho","orcid":"https://orcid.org/0000-0001-7344-695X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Meng-Ru Ho","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038645756","display_name":"Hai\u2010Gwo Hwu","orcid":"https://orcid.org/0000-0002-2582-2807"},"institutions":[{"id":"https://openalex.org/I4210131804","display_name":"National Taiwan University Hospital","ror":"https://ror.org/03nteze27","country_code":"TW","type":"healthcare","lineage":["https://openalex.org/I4210131804"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Hai-Gwo Hwu","raw_affiliation_strings":["Department of Psychiatry, National Taiwan University Hospital and College of Medicine, Taipei, Taiwan, R.O.C"],"affiliations":[{"raw_affiliation_string":"Department of Psychiatry, National Taiwan University Hospital and College of Medicine, Taipei, Taiwan, R.O.C","institution_ids":["https://openalex.org/I4210131804"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017714504","display_name":"Wen\u2010chang Lin","orcid":"https://orcid.org/0000-0003-0194-1745"},"institutions":[{"id":"https://openalex.org/I4210096666","display_name":"Institute of Biomedical Sciences, Academia Sinica","ror":"https://ror.org/00tk6s776","country_code":"TW","type":"facility","lineage":["https://openalex.org/I4210096666","https://openalex.org/I84653119"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Wen-chang Lin","raw_affiliation_strings":["Institute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan, R.O.C"],"affiliations":[{"raw_affiliation_string":"Institute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan, R.O.C","institution_ids":["https://openalex.org/I4210096666"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044878972","display_name":"Mi\u2010Hua Tao","orcid":"https://orcid.org/0000-0002-4307-5729"},"institutions":[{"id":"https://openalex.org/I4210096666","display_name":"Institute of Biomedical Sciences, Academia Sinica","ror":"https://ror.org/00tk6s776","country_code":"TW","type":"facility","lineage":["https://openalex.org/I4210096666","https://openalex.org/I84653119"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Mi-Hua Tao","raw_affiliation_strings":["Institute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan, R.O.C"],"affiliations":[{"raw_affiliation_string":"Institute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan, R.O.C","institution_ids":["https://openalex.org/I4210096666"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5016200959","display_name":"Chun\u2010Houh Chen","orcid":"https://orcid.org/0000-0003-0899-7477"},"institutions":[{"id":"https://openalex.org/I4210141710","display_name":"Institute of Statistical Science, Academia Sinica","ror":"https://ror.org/044gv5910","country_code":"TW","type":"facility","lineage":["https://openalex.org/I4210141710","https://openalex.org/I84653119"]}],"countries":["TW"],"is_corresponding":true,"raw_author_name":"Chun-houh Chen","raw_affiliation_strings":["Institute of Statistical Science, Academia Sinica, Taipei, Taiwan, R.O.C"],"affiliations":[{"raw_affiliation_string":"Institute of Statistical Science, Academia Sinica, Taipei, Taiwan, R.O.C","institution_ids":["https://openalex.org/I4210141710"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5016200959"],"corresponding_institution_ids":["https://openalex.org/I4210141710"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":0.1838,"has_fulltext":false,"cited_by_count":13,"citation_normalized_percentile":{"value":0.51798638,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"34","issue":"20","first_page":"3529","last_page":"3538"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9957000017166138,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9957000017166138,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9934999942779541,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10799","display_name":"Data Visualization and Analytics","score":0.9782999753952026,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/covariate","display_name":"Covariate","score":0.9622998237609863},{"id":"https://openalex.org/keywords/correlation","display_name":"Correlation","score":0.641006588935852},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.5287420749664307},{"id":"https://openalex.org/keywords/dimension","display_name":"Dimension (graph theory)","score":0.5041404962539673},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.5012352466583252},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4991023540496826},{"id":"https://openalex.org/keywords/principal-component-analysis","display_name":"Principal component analysis","score":0.46038129925727844},{"id":"https://openalex.org/keywords/component","display_name":"Component (thermodynamics)","score":0.43383413553237915},{"id":"https://openalex.org/keywords/relation","display_name":"Relation (database)","score":0.4255956709384918},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.40660977363586426},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.40306103229522705}],"concepts":[{"id":"https://openalex.org/C119043178","wikidata":"https://www.wikidata.org/wiki/Q320723","display_name":"Covariate","level":2,"score":0.9622998237609863},{"id":"https://openalex.org/C117220453","wikidata":"https://www.wikidata.org/wiki/Q5172842","display_name":"Correlation","level":2,"score":0.641006588935852},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.5287420749664307},{"id":"https://openalex.org/C33676613","wikidata":"https://www.wikidata.org/wiki/Q13415176","display_name":"Dimension (graph theory)","level":2,"score":0.5041404962539673},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.5012352466583252},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4991023540496826},{"id":"https://openalex.org/C27438332","wikidata":"https://www.wikidata.org/wiki/Q2873","display_name":"Principal component analysis","level":2,"score":0.46038129925727844},{"id":"https://openalex.org/C168167062","wikidata":"https://www.wikidata.org/wiki/Q1117970","display_name":"Component (thermodynamics)","level":2,"score":0.43383413553237915},{"id":"https://openalex.org/C25343380","wikidata":"https://www.wikidata.org/wiki/Q277521","display_name":"Relation (database)","level":2,"score":0.4255956709384918},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.40660977363586426},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.40306103229522705},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0},{"id":"https://openalex.org/C97355855","wikidata":"https://www.wikidata.org/wiki/Q11473","display_name":"Thermodynamics","level":1,"score":0.0},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/bty335","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty335","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:29718246","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29718246","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.46000000834465027,"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education"}],"awards":[{"id":"https://openalex.org/G7124734354","display_name":null,"funder_award_id":"99-3112-B-001-029","funder_id":"https://openalex.org/F4320321040","funder_display_name":"National Science Council"}],"funders":[{"id":"https://openalex.org/F4320321040","display_name":"National Science Council","ror":"https://ror.org/02kv4zf79"},{"id":"https://openalex.org/F4320322795","display_name":"Ministry of Science and Technology, Taiwan","ror":"https://ror.org/02kv4zf79"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":42,"referenced_works":["https://openalex.org/W166500168","https://openalex.org/W404240460","https://openalex.org/W1492410488","https://openalex.org/W1992314595","https://openalex.org/W2011266879","https://openalex.org/W2014106340","https://openalex.org/W2014461446","https://openalex.org/W2025872262","https://openalex.org/W2061908126","https://openalex.org/W2069086045","https://openalex.org/W2094612774","https://openalex.org/W2097137621","https://openalex.org/W2098527037","https://openalex.org/W2099380913","https://openalex.org/W2107665951","https://openalex.org/W2111734525","https://openalex.org/W2117133527","https://openalex.org/W2120965285","https://openalex.org/W2122982115","https://openalex.org/W2124238525","https://openalex.org/W2128712108","https://openalex.org/W2134586291","https://openalex.org/W2137818934","https://openalex.org/W2140541004","https://openalex.org/W2141643929","https://openalex.org/W2150926065","https://openalex.org/W2151889136","https://openalex.org/W2152825437","https://openalex.org/W2155115337","https://openalex.org/W2158131091","https://openalex.org/W2160329838","https://openalex.org/W2160854065","https://openalex.org/W2164222385","https://openalex.org/W2168215278","https://openalex.org/W2170135240","https://openalex.org/W2323405795","https://openalex.org/W2589166636","https://openalex.org/W4229688926","https://openalex.org/W4240665608","https://openalex.org/W4242925998","https://openalex.org/W6613934775","https://openalex.org/W6682298320"],"related_works":["https://openalex.org/W2985746494","https://openalex.org/W4206042385","https://openalex.org/W2511384863","https://openalex.org/W2096089271","https://openalex.org/W2923628599","https://openalex.org/W2014100433","https://openalex.org/W2051519658","https://openalex.org/W2994787386","https://openalex.org/W2002304499","https://openalex.org/W4388444561"],"abstract_inverted_index":{"Supplementary":[0],"Data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":5},{"year":2023,"cited_by_count":3},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
