{"id":"https://openalex.org/W2613206385","doi":"https://doi.org/10.1093/bioinformatics/bty257","title":"Improving genomics-based predictions for precision medicine through active elicitation of expert knowledge","display_name":"Improving genomics-based predictions for precision medicine through active elicitation of expert knowledge","publication_year":2018,"publication_date":"2018-04-13","ids":{"openalex":"https://openalex.org/W2613206385","doi":"https://doi.org/10.1093/bioinformatics/bty257","mag":"2613206385","pmid":"https://pubmed.ncbi.nlm.nih.gov/29949984"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/bty257","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty257","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/13/i395/25098271/bty257.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["arxiv","crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/34/13/i395/25098271/bty257.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5037354462","display_name":"Iiris Sundin","orcid":"https://orcid.org/0000-0002-6737-8249"},"institutions":[{"id":"https://openalex.org/I32943570","display_name":"Helsinki Institute for Information Technology","ror":"https://ror.org/05kph4940","country_code":"FI","type":"facility","lineage":["https://openalex.org/I133731052","https://openalex.org/I32943570","https://openalex.org/I9927081"]},{"id":"https://openalex.org/I9927081","display_name":"Aalto University","ror":"https://ror.org/020hwjq30","country_code":"FI","type":"education","lineage":["https://openalex.org/I9927081"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Iiris Sundin","raw_affiliation_strings":["Department of Computer Science, Helsinki Institute for Information Technology HIIT, Aalto University, Helsinki, Finland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Helsinki Institute for Information Technology HIIT, Aalto University, Helsinki, Finland","institution_ids":["https://openalex.org/I32943570","https://openalex.org/I9927081"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103819361","display_name":"Tomi Peltola","orcid":null},"institutions":[{"id":"https://openalex.org/I32943570","display_name":"Helsinki Institute for Information Technology","ror":"https://ror.org/05kph4940","country_code":"FI","type":"facility","lineage":["https://openalex.org/I133731052","https://openalex.org/I32943570","https://openalex.org/I9927081"]},{"id":"https://openalex.org/I9927081","display_name":"Aalto University","ror":"https://ror.org/020hwjq30","country_code":"FI","type":"education","lineage":["https://openalex.org/I9927081"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Tomi Peltola","raw_affiliation_strings":["Department of Computer Science, Helsinki Institute for Information Technology HIIT, Aalto University, Helsinki, Finland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Helsinki Institute for Information Technology HIIT, Aalto University, Helsinki, Finland","institution_ids":["https://openalex.org/I32943570","https://openalex.org/I9927081"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076239296","display_name":"Luana Micallef","orcid":null},"institutions":[{"id":"https://openalex.org/I32943570","display_name":"Helsinki Institute for Information Technology","ror":"https://ror.org/05kph4940","country_code":"FI","type":"facility","lineage":["https://openalex.org/I133731052","https://openalex.org/I32943570","https://openalex.org/I9927081"]},{"id":"https://openalex.org/I9927081","display_name":"Aalto University","ror":"https://ror.org/020hwjq30","country_code":"FI","type":"education","lineage":["https://openalex.org/I9927081"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Luana Micallef","raw_affiliation_strings":["Department of Computer Science, Helsinki Institute for Information Technology HIIT, Aalto University, Helsinki, Finland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Helsinki Institute for Information Technology HIIT, Aalto University, Helsinki, Finland","institution_ids":["https://openalex.org/I32943570","https://openalex.org/I9927081"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000594867","display_name":"Homayun Afrabandpey","orcid":"https://orcid.org/0000-0001-7639-1501"},"institutions":[{"id":"https://openalex.org/I32943570","display_name":"Helsinki Institute for Information Technology","ror":"https://ror.org/05kph4940","country_code":"FI","type":"facility","lineage":["https://openalex.org/I133731052","https://openalex.org/I32943570","https://openalex.org/I9927081"]},{"id":"https://openalex.org/I9927081","display_name":"Aalto University","ror":"https://ror.org/020hwjq30","country_code":"FI","type":"education","lineage":["https://openalex.org/I9927081"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Homayun Afrabandpey","raw_affiliation_strings":["Department of Computer Science, Helsinki Institute for Information Technology HIIT, Aalto University, Helsinki, Finland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Helsinki Institute for Information Technology HIIT, Aalto University, Helsinki, Finland","institution_ids":["https://openalex.org/I32943570","https://openalex.org/I9927081"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103739405","display_name":"Marta Soare","orcid":"https://orcid.org/0000-0002-5610-8470"},"institutions":[{"id":"https://openalex.org/I32943570","display_name":"Helsinki Institute for Information Technology","ror":"https://ror.org/05kph4940","country_code":"FI","type":"facility","lineage":["https://openalex.org/I133731052","https://openalex.org/I32943570","https://openalex.org/I9927081"]},{"id":"https://openalex.org/I9927081","display_name":"Aalto University","ror":"https://ror.org/020hwjq30","country_code":"FI","type":"education","lineage":["https://openalex.org/I9927081"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Marta Soare","raw_affiliation_strings":["Department of Computer Science, Helsinki Institute for Information Technology HIIT, Aalto University, Helsinki, Finland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Helsinki Institute for Information Technology HIIT, Aalto University, Helsinki, Finland","institution_ids":["https://openalex.org/I32943570","https://openalex.org/I9927081"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075634967","display_name":"Muntasir Mamun Majumder","orcid":"https://orcid.org/0000-0002-5550-2951"},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]},{"id":"https://openalex.org/I4210133586","display_name":"Institute for Molecular Medicine Finland","ror":"https://ror.org/030sbze61","country_code":"FI","type":"facility","lineage":["https://openalex.org/I133731052","https://openalex.org/I4210133586"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Muntasir Mamun Majumder","raw_affiliation_strings":["Institute for Molecular Medicine Finland FIMM, Helsinki Institute of Life Science, University of Helsinki, Helsinki, Finland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Molecular Medicine Finland FIMM, Helsinki Institute of Life Science, University of Helsinki, Helsinki, Finland","institution_ids":["https://openalex.org/I4210133586","https://openalex.org/I133731052"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060612397","display_name":"Pedram Daee","orcid":null},"institutions":[{"id":"https://openalex.org/I32943570","display_name":"Helsinki Institute for Information Technology","ror":"https://ror.org/05kph4940","country_code":"FI","type":"facility","lineage":["https://openalex.org/I133731052","https://openalex.org/I32943570","https://openalex.org/I9927081"]},{"id":"https://openalex.org/I9927081","display_name":"Aalto University","ror":"https://ror.org/020hwjq30","country_code":"FI","type":"education","lineage":["https://openalex.org/I9927081"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Pedram Daee","raw_affiliation_strings":["Department of Computer Science, Helsinki Institute for Information Technology HIIT, Aalto University, Helsinki, Finland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Helsinki Institute for Information Technology HIIT, Aalto University, Helsinki, Finland","institution_ids":["https://openalex.org/I32943570","https://openalex.org/I9927081"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019862820","display_name":"Chen He","orcid":"https://orcid.org/0000-0003-2055-4468"},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]},{"id":"https://openalex.org/I32943570","display_name":"Helsinki Institute for Information Technology","ror":"https://ror.org/05kph4940","country_code":"FI","type":"facility","lineage":["https://openalex.org/I133731052","https://openalex.org/I32943570","https://openalex.org/I9927081"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Chen He","raw_affiliation_strings":["Department of Computer Science, Helsinki Institute for Information Technology HIIT, University of Helsinki, Helsinki, Finland","Helsingin yliopisto = Helsingfors universitet = University of Helsinki"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Helsinki Institute for Information Technology HIIT, University of Helsinki, Helsinki, Finland","institution_ids":["https://openalex.org/I32943570","https://openalex.org/I133731052"]},{"raw_affiliation_string":"Helsingin yliopisto = Helsingfors universitet = University of Helsinki","institution_ids":["https://openalex.org/I133731052"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059478860","display_name":"Bar\u0131\u015f Serim","orcid":"https://orcid.org/0000-0003-1553-9642"},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]},{"id":"https://openalex.org/I32943570","display_name":"Helsinki Institute for Information Technology","ror":"https://ror.org/05kph4940","country_code":"FI","type":"facility","lineage":["https://openalex.org/I133731052","https://openalex.org/I32943570","https://openalex.org/I9927081"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Baris Serim","raw_affiliation_strings":["Department of Computer Science, Helsinki Institute for Information Technology HIIT, University of Helsinki, Helsinki, Finland","Helsingin yliopisto = Helsingfors universitet = University of Helsinki"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Helsinki Institute for Information Technology HIIT, University of Helsinki, Helsinki, Finland","institution_ids":["https://openalex.org/I32943570","https://openalex.org/I133731052"]},{"raw_affiliation_string":"Helsingin yliopisto = Helsingfors universitet = University of Helsinki","institution_ids":["https://openalex.org/I133731052"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054656133","display_name":"Aki S. Havulinna","orcid":"https://orcid.org/0000-0002-4787-8959"},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]},{"id":"https://openalex.org/I39624965","display_name":"Finnish Institute for Health and Welfare","ror":"https://ror.org/03tf0c761","country_code":"FI","type":"funder","lineage":["https://openalex.org/I39624965"]},{"id":"https://openalex.org/I4210133586","display_name":"Institute for Molecular Medicine Finland","ror":"https://ror.org/030sbze61","country_code":"FI","type":"facility","lineage":["https://openalex.org/I133731052","https://openalex.org/I4210133586"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Aki Havulinna","raw_affiliation_strings":["Institute for Molecular Medicine Finland FIMM, Helsinki Institute of Life Science, University of Helsinki, Helsinki, Finland","National Institute for Health and Welfare THL, Helsinki, Finland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Molecular Medicine Finland FIMM, Helsinki Institute of Life Science, University of Helsinki, Helsinki, Finland","institution_ids":["https://openalex.org/I4210133586","https://openalex.org/I133731052"]},{"raw_affiliation_string":"National Institute for Health and Welfare THL, Helsinki, Finland","institution_ids":["https://openalex.org/I39624965"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061939140","display_name":"Caroline A. Heckman","orcid":"https://orcid.org/0000-0002-4324-8706"},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]},{"id":"https://openalex.org/I4210133586","display_name":"Institute for Molecular Medicine Finland","ror":"https://ror.org/030sbze61","country_code":"FI","type":"facility","lineage":["https://openalex.org/I133731052","https://openalex.org/I4210133586"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Caroline Heckman","raw_affiliation_strings":["Institute for Molecular Medicine Finland FIMM, Helsinki Institute of Life Science, University of Helsinki, Helsinki, Finland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Molecular Medicine Finland FIMM, Helsinki Institute of Life Science, University of Helsinki, Helsinki, Finland","institution_ids":["https://openalex.org/I4210133586","https://openalex.org/I133731052"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074899838","display_name":"Giulio Jacucci","orcid":"https://orcid.org/0000-0002-9185-7928"},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]},{"id":"https://openalex.org/I32943570","display_name":"Helsinki Institute for Information Technology","ror":"https://ror.org/05kph4940","country_code":"FI","type":"facility","lineage":["https://openalex.org/I133731052","https://openalex.org/I32943570","https://openalex.org/I9927081"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Giulio Jacucci","raw_affiliation_strings":["Department of Computer Science, Helsinki Institute for Information Technology HIIT, University of Helsinki, Helsinki, Finland","Helsingin yliopisto = Helsingfors universitet = University of Helsinki"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Helsinki Institute for Information Technology HIIT, University of Helsinki, Helsinki, Finland","institution_ids":["https://openalex.org/I32943570","https://openalex.org/I133731052"]},{"raw_affiliation_string":"Helsingin yliopisto = Helsingfors universitet = University of Helsinki","institution_ids":["https://openalex.org/I133731052"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089920272","display_name":"Pekka Marttinen","orcid":"https://orcid.org/0000-0001-7078-7927"},"institutions":[{"id":"https://openalex.org/I32943570","display_name":"Helsinki Institute for Information Technology","ror":"https://ror.org/05kph4940","country_code":"FI","type":"facility","lineage":["https://openalex.org/I133731052","https://openalex.org/I32943570","https://openalex.org/I9927081"]},{"id":"https://openalex.org/I9927081","display_name":"Aalto University","ror":"https://ror.org/020hwjq30","country_code":"FI","type":"education","lineage":["https://openalex.org/I9927081"]}],"countries":["FI"],"is_corresponding":true,"raw_author_name":"Pekka Marttinen","raw_affiliation_strings":["Department of Computer Science, Helsinki Institute for Information Technology HIIT, Aalto University, Helsinki, Finland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Helsinki Institute for Information Technology HIIT, Aalto University, Helsinki, Finland","institution_ids":["https://openalex.org/I32943570","https://openalex.org/I9927081"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5018305257","display_name":"Samuel Kaski","orcid":"https://orcid.org/0000-0003-1925-9154"},"institutions":[{"id":"https://openalex.org/I32943570","display_name":"Helsinki Institute for Information Technology","ror":"https://ror.org/05kph4940","country_code":"FI","type":"facility","lineage":["https://openalex.org/I133731052","https://openalex.org/I32943570","https://openalex.org/I9927081"]},{"id":"https://openalex.org/I9927081","display_name":"Aalto University","ror":"https://ror.org/020hwjq30","country_code":"FI","type":"education","lineage":["https://openalex.org/I9927081"]}],"countries":["FI"],"is_corresponding":true,"raw_author_name":"Samuel Kaski","raw_affiliation_strings":["Department of Computer Science, Helsinki Institute for Information Technology HIIT, Aalto University, Helsinki, Finland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Helsinki Institute for Information Technology HIIT, Aalto University, Helsinki, Finland","institution_ids":["https://openalex.org/I32943570","https://openalex.org/I9927081"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":14,"corresponding_author_ids":["https://openalex.org/A5018305257","https://openalex.org/A5089920272"],"corresponding_institution_ids":["https://openalex.org/I32943570","https://openalex.org/I9927081"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.742,"has_fulltext":true,"cited_by_count":17,"citation_normalized_percentile":{"value":0.69463995,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":98},"biblio":{"volume":"34","issue":"13","first_page":"i395","last_page":"i403"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.2766999900341034,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.2766999900341034,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11235","display_name":"Statistical Methods in Clinical Trials","score":0.12620000541210175,"subfield":{"id":"https://openalex.org/subfields/2613","display_name":"Statistics and Probability"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.09000000357627869,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7583233118057251},{"id":"https://openalex.org/keywords/precision-medicine","display_name":"Precision medicine","score":0.6470254063606262},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.607353687286377},{"id":"https://openalex.org/keywords/probabilistic-logic","display_name":"Probabilistic logic","score":0.524695098400116},{"id":"https://openalex.org/keywords/workload","display_name":"Workload","score":0.5178411602973938},{"id":"https://openalex.org/keywords/baseline","display_name":"Baseline (sea)","score":0.49656230211257935},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.471407413482666},{"id":"https://openalex.org/keywords/sensitivity","display_name":"Sensitivity (control systems)","score":0.46620476245880127},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.45752015709877014},{"id":"https://openalex.org/keywords/bayesian-probability","display_name":"Bayesian probability","score":0.4557703137397766},{"id":"https://openalex.org/keywords/source-code","display_name":"Source code","score":0.4324919283390045},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.32715946435928345}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7583233118057251},{"id":"https://openalex.org/C163763905","wikidata":"https://www.wikidata.org/wiki/Q17075943","display_name":"Precision medicine","level":2,"score":0.6470254063606262},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.607353687286377},{"id":"https://openalex.org/C49937458","wikidata":"https://www.wikidata.org/wiki/Q2599292","display_name":"Probabilistic logic","level":2,"score":0.524695098400116},{"id":"https://openalex.org/C2778476105","wikidata":"https://www.wikidata.org/wiki/Q628539","display_name":"Workload","level":2,"score":0.5178411602973938},{"id":"https://openalex.org/C12725497","wikidata":"https://www.wikidata.org/wiki/Q810247","display_name":"Baseline (sea)","level":2,"score":0.49656230211257935},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.471407413482666},{"id":"https://openalex.org/C21200559","wikidata":"https://www.wikidata.org/wiki/Q7451068","display_name":"Sensitivity (control systems)","level":2,"score":0.46620476245880127},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.45752015709877014},{"id":"https://openalex.org/C107673813","wikidata":"https://www.wikidata.org/wiki/Q812534","display_name":"Bayesian probability","level":2,"score":0.4557703137397766},{"id":"https://openalex.org/C43126263","wikidata":"https://www.wikidata.org/wiki/Q128751","display_name":"Source code","level":2,"score":0.4324919283390045},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.32715946435928345},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C24326235","wikidata":"https://www.wikidata.org/wiki/Q126095","display_name":"Electronic engineering","level":1,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C127313418","wikidata":"https://www.wikidata.org/wiki/Q1069","display_name":"Geology","level":0,"score":0.0},{"id":"https://openalex.org/C111368507","wikidata":"https://www.wikidata.org/wiki/Q43518","display_name":"Oceanography","level":1,"score":0.0},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":8,"locations":[{"id":"doi:10.1093/bioinformatics/bty257","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty257","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/13/i395/25098271/bty257.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:29949984","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29949984","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:arXiv.org:1705.03290","is_oa":true,"landing_page_url":"http://arxiv.org/abs/1705.03290","pdf_url":"https://arxiv.org/pdf/1705.03290","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},{"id":"pmh:oai:helda.helsinki.fi:10138/237529","is_oa":true,"landing_page_url":"http://hdl.handle.net/10138/237529","pdf_url":"http://hdl.handle.net/10138/237529","source":{"id":"https://openalex.org/S4210213322","display_name":"Ty\u00f6v\u00e4entutkimus Vuosikirja","issn_l":"0784-1272","issn":["0784-1272","1459-7780"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Article"},{"id":"pmh:oai:HAL:hal-01826109v1","is_oa":false,"landing_page_url":"https://inria.hal.science/hal-01826109","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics, 2018, 34 (13), pp.i395 - i403. &#x27E8;10.1093/bioinformatics/bty257&#x27E9;","raw_type":"Journal articles"},{"id":"pmh:oai:aaltodoc.aalto.fi:123456789/32941","is_oa":true,"landing_page_url":"https://research.aalto.fi/en/publications/e381d341-1e23-45f6-aff9-3b385039b21a","pdf_url":null,"source":{"id":"https://openalex.org/S4306401663","display_name":"Aaltodoc (Aalto University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I9927081","host_organization_name":"Aalto University","host_organization_lineage":["https://openalex.org/I9927081"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"publishedVersion"},{"id":"pmh:oai:europepmc.org:4982263","is_oa":false,"landing_page_url":"http://europepmc.org/pmc/articles/PMC6022689","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:6022689","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6022689","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/bty257","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty257","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/13/i395/25098271/bty257.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.46000000834465027,"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3"}],"awards":[{"id":"https://openalex.org/G2554296368","display_name":null,"funder_award_id":"284642","funder_id":"https://openalex.org/F4320321108","funder_display_name":"Academy of Finland"},{"id":"https://openalex.org/G4043316101","display_name":null,"funder_award_id":"294015","funder_id":"https://openalex.org/F4320321108","funder_display_name":"Academy of Finland"},{"id":"https://openalex.org/G5498917553","display_name":null,"funder_award_id":"294238","funder_id":"https://openalex.org/F4320321108","funder_display_name":"Academy of Finland"},{"id":"https://openalex.org/G5523390038","display_name":null,"funder_award_id":"286607","funder_id":"https://openalex.org/F4320321108","funder_display_name":"Academy of Finland"},{"id":"https://openalex.org/G7966353708","display_name":null,"funder_award_id":"292334","funder_id":"https://openalex.org/F4320321108","funder_display_name":"Academy of Finland"},{"id":"https://openalex.org/G8002238131","display_name":null,"funder_award_id":"286607 and 294015","funder_id":"https://openalex.org/F4320321108","funder_display_name":"Academy of Finland"}],"funders":[{"id":"https://openalex.org/F4320310907","display_name":"Alfred Kordelinin S\u00e4\u00e4ti\u00f6","ror":"https://ror.org/0107h6s84"},{"id":"https://openalex.org/F4320321108","display_name":"Academy of Finland","ror":"https://ror.org/05k73zm37"},{"id":"https://openalex.org/F4320334901","display_name":"Jenny ja Antti Wihurin Rahasto","ror":"https://ror.org/01gpyzq83"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2613206385.pdf","grobid_xml":"https://content.openalex.org/works/W2613206385.grobid-xml"},"referenced_works_count":52,"referenced_works":["https://openalex.org/W19078547","https://openalex.org/W1487320471","https://openalex.org/W1537268731","https://openalex.org/W1567012231","https://openalex.org/W1596524570","https://openalex.org/W1826346558","https://openalex.org/W1836550785","https://openalex.org/W1900820545","https://openalex.org/W1964699659","https://openalex.org/W1976041429","https://openalex.org/W1988195069","https://openalex.org/W1990004856","https://openalex.org/W1999974018","https://openalex.org/W2001994823","https://openalex.org/W2002783575","https://openalex.org/W2007069447","https://openalex.org/W2009551863","https://openalex.org/W2010457001","https://openalex.org/W2035662710","https://openalex.org/W2053719406","https://openalex.org/W2065637266","https://openalex.org/W2097360283","https://openalex.org/W2104924585","https://openalex.org/W2108114251","https://openalex.org/W2108530422","https://openalex.org/W2108868276","https://openalex.org/W2108933868","https://openalex.org/W2112420033","https://openalex.org/W2115709314","https://openalex.org/W2118151336","https://openalex.org/W2125789330","https://openalex.org/W2127625042","https://openalex.org/W2164340936","https://openalex.org/W2166471851","https://openalex.org/W2170146596","https://openalex.org/W2293825098","https://openalex.org/W2310542696","https://openalex.org/W2397002046","https://openalex.org/W2432718434","https://openalex.org/W2513486311","https://openalex.org/W2554401505","https://openalex.org/W2563271136","https://openalex.org/W2566364994","https://openalex.org/W2744744159","https://openalex.org/W3098967121","https://openalex.org/W3100372030","https://openalex.org/W4239353198","https://openalex.org/W4246858143","https://openalex.org/W4250854943","https://openalex.org/W4294541781","https://openalex.org/W4321000873","https://openalex.org/W6684880301"],"related_works":["https://openalex.org/W2000785801","https://openalex.org/W986318368","https://openalex.org/W2384410913","https://openalex.org/W2383111961","https://openalex.org/W2352878646","https://openalex.org/W2365952365","https://openalex.org/W2004734601","https://openalex.org/W2352448290","https://openalex.org/W2130149817","https://openalex.org/W2990194547"],"abstract_inverted_index":{"Motivation:":[0],"Precision":[1],"medicine":[2],"requires":[3],"the":[4,8,29,51,70,76,87,127,134,137,153],"ability":[5],"to":[6,41,65,85,117,130,139,143],"predict":[7],"efficacies":[9],"of":[10,53,72,78,107,112,114,136],"different":[11,118],"treatments":[12],"for":[13],"a":[14,26,38,62,82,144],"given":[15],"individual":[16],"using":[17,121],"high-dimensional":[18],"genomic":[19,73,122],"measurements.":[20],"However,":[21],"identifying":[22],"predictive":[23],"features":[24,55,123],"remains":[25],"challenge":[27],"when":[28],"sample":[30],"size":[31],"is":[32,48,56,157],"small.":[33],"Incorporating":[34],"expert":[35,67,138],"knowledge":[36,47],"offers":[37],"promising":[39],"approach":[40,84,97,129],"improve":[42],"predictions,":[43],"but":[44],"collecting":[45],"such":[46],"laborious":[49],"if":[50],"number":[52],"candidate":[54],"very":[57],"large.":[58],"Results:":[59],"We":[60],"introduce":[61],"probabilistic":[63],"framework":[64],"incorporate":[66],"feedback":[68,88,132],"about":[69],"impact":[71],"measurements":[74],"on":[75,91],"outcome":[77],"interest":[79],"and":[80,110,148],"present":[81],"novel":[83],"collect":[86,131],"efficiently,":[89],"based":[90],"Bayesian":[92],"experimental":[93],"design.":[94],"The":[95],"new":[96],"outperformed":[98],"other":[99],"recent":[100],"alternatives":[101],"in":[102],"two":[103],"medical":[104],"applications:":[105],"prediction":[106,111],"metabolic":[108],"traits":[109],"sensitivity":[113],"cancer":[115],"cells":[116],"drugs,":[119],"both":[120],"as":[124],"predictors.":[125],"Furthermore,":[126],"intelligent":[128],"reduced":[133],"workload":[135],"approximately":[140],"11%,":[141],"compared":[142],"baseline":[145],"approach.":[146],"Availability":[147],"implementation:":[149],"Source":[150],"code":[151],"implementing":[152],"introduced":[154],"computational":[155],"methods":[156],"freely":[158],"available":[159,167],"at":[160,168],"https://github.com/AaltoPML/knowledge-elicitation-for-precision-medicine.":[161],"Supplementary":[162,164],"information:":[163],"data":[165],"are":[166],"Bioinformatics":[169],"online.":[170]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":2}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
