{"id":"https://openalex.org/W2793111149","doi":"https://doi.org/10.1093/bioinformatics/bty153","title":"Data mining of effect sizes from PubMed abstracts: a cross-study conceptual replication","display_name":"Data mining of effect sizes from PubMed abstracts: a cross-study conceptual replication","publication_year":2018,"publication_date":"2018-03-08","ids":{"openalex":"https://openalex.org/W2793111149","doi":"https://doi.org/10.1093/bioinformatics/bty153","mag":"2793111149","pmid":"https://pubmed.ncbi.nlm.nih.gov/29547980"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/bty153","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty153","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/15/2698/25230852/bty153.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/34/15/2698/25230852/bty153.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5059708120","display_name":"Paul Monsarrat","orcid":"https://orcid.org/0000-0002-5473-6035"},"institutions":[{"id":"https://openalex.org/I176063091","display_name":"\u00c9cole Nationale V\u00e9t\u00e9rinaire de Toulouse","ror":"https://ror.org/03m3gzv89","country_code":"FR","type":"education","lineage":["https://openalex.org/I176063091","https://openalex.org/I4210117091","https://openalex.org/I4405258862"]},{"id":"https://openalex.org/I3019448017","display_name":"Centre Hospitalier Universitaire de Toulouse","ror":"https://ror.org/017h5q109","country_code":"FR","type":"healthcare","lineage":["https://openalex.org/I3019448017"]},{"id":"https://openalex.org/I134560555","display_name":"Universit\u00e9 Toulouse III - Paul Sabatier","ror":"https://ror.org/02v6kpv12","country_code":"FR","type":"education","lineage":["https://openalex.org/I134560555","https://openalex.org/I4405258862"]},{"id":"https://openalex.org/I17866349","display_name":"Universit\u00e9 F\u00e9d\u00e9rale de Toulouse Midi-Pyr\u00e9n\u00e9es","ror":"https://ror.org/004raaa70","country_code":"FR","type":"education","lineage":["https://openalex.org/I17866349"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Paul Monsarrat","raw_affiliation_strings":["Department of Anatomical Sciences and Radiology, Dental Faculty, Paul Sabatier University, Toulouse University Hospital (CHU de Toulouse), Toulouse, France","STROMALab, Universit\u00e9 de Toulouse, CNRS ERL 5311, EFS, ENVT, Inserm, UPS, Toulouse, France"],"affiliations":[{"raw_affiliation_string":"Department of Anatomical Sciences and Radiology, Dental Faculty, Paul Sabatier University, Toulouse University Hospital (CHU de Toulouse), Toulouse, France","institution_ids":["https://openalex.org/I134560555","https://openalex.org/I3019448017"]},{"raw_affiliation_string":"STROMALab, Universit\u00e9 de Toulouse, CNRS ERL 5311, EFS, ENVT, Inserm, UPS, Toulouse, France","institution_ids":["https://openalex.org/I17866349","https://openalex.org/I154526488","https://openalex.org/I134560555","https://openalex.org/I176063091","https://openalex.org/I1294671590"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5066214593","display_name":"Jean\u2010No\u00ebl Vergnes","orcid":"https://orcid.org/0000-0001-7322-6551"},"institutions":[{"id":"https://openalex.org/I134560555","display_name":"Universit\u00e9 Toulouse III - Paul Sabatier","ror":"https://ror.org/02v6kpv12","country_code":"FR","type":"education","lineage":["https://openalex.org/I134560555","https://openalex.org/I4405258862"]},{"id":"https://openalex.org/I3019448017","display_name":"Centre Hospitalier Universitaire de Toulouse","ror":"https://ror.org/017h5q109","country_code":"FR","type":"healthcare","lineage":["https://openalex.org/I3019448017"]},{"id":"https://openalex.org/I5023651","display_name":"McGill University","ror":"https://ror.org/01pxwe438","country_code":"CA","type":"education","lineage":["https://openalex.org/I5023651"]}],"countries":["CA","FR"],"is_corresponding":true,"raw_author_name":"Jean-Noel Vergnes","raw_affiliation_strings":["Department of Epidemiology and Public Health, Dental Faculty, Paul Sabatier University, Toulouse University Hospital (CHU de Toulouse), Toulouse, France","Division of Oral Health and Society, Faculty of Dentistry, McGill University, Montreal, QC, Canada"],"affiliations":[{"raw_affiliation_string":"Department of Epidemiology and Public Health, Dental Faculty, Paul Sabatier University, Toulouse University Hospital (CHU de Toulouse), Toulouse, France","institution_ids":["https://openalex.org/I134560555","https://openalex.org/I3019448017"]},{"raw_affiliation_string":"Division of Oral Health and Society, Faculty of Dentistry, McGill University, Montreal, QC, Canada","institution_ids":["https://openalex.org/I5023651"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5066214593"],"corresponding_institution_ids":["https://openalex.org/I134560555","https://openalex.org/I3019448017","https://openalex.org/I5023651"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":1.4929,"has_fulltext":false,"cited_by_count":4,"citation_normalized_percentile":{"value":0.89063747,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":96},"biblio":{"volume":"34","issue":"15","first_page":"2698","last_page":"2700"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9886000156402588,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9796000123023987,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/replication","display_name":"Replication (statistics)","score":0.8333253860473633},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5819658637046814},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4435034394264221},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4013896584510803},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.362543523311615},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.33044737577438354},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.23381981253623962},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.20650389790534973}],"concepts":[{"id":"https://openalex.org/C12590798","wikidata":"https://www.wikidata.org/wiki/Q3933199","display_name":"Replication (statistics)","level":2,"score":0.8333253860473633},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5819658637046814},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4435034394264221},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4013896584510803},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.362543523311615},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.33044737577438354},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.23381981253623962},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.20650389790534973}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/bty153","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty153","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/15/2698/25230852/bty153.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:29547980","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29547980","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/bty153","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bty153","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/15/2698/25230852/bty153.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2995654023","display_name":null,"funder_award_id":"ANR-16-CE18-0019-01","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"}],"funders":[{"id":"https://openalex.org/F4320320883","display_name":"Agence Nationale de la Recherche","ror":"https://ror.org/00rbzpz17"},{"id":"https://openalex.org/F4320322829","display_name":"Universit\u00e9 de Toulouse","ror":"https://ror.org/017tgbk05"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2793111149.pdf","grobid_xml":"https://content.openalex.org/works/W2793111149.grobid-xml"},"referenced_works_count":6,"referenced_works":["https://openalex.org/W1912962915","https://openalex.org/W2036318837","https://openalex.org/W2130727984","https://openalex.org/W2166378641","https://openalex.org/W2538972132","https://openalex.org/W2774363476"],"related_works":["https://openalex.org/W4205713785","https://openalex.org/W3016766501","https://openalex.org/W2901033488","https://openalex.org/W2031325922","https://openalex.org/W3086458689","https://openalex.org/W4287666211","https://openalex.org/W2898161671","https://openalex.org/W2249859249","https://openalex.org/W4282545449","https://openalex.org/W4251387359"],"abstract_inverted_index":null,"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2020,"cited_by_count":2},{"year":2018,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
