{"id":"https://openalex.org/W2778576074","doi":"https://doi.org/10.1093/bioinformatics/btx843","title":"ChronQC: a quality control monitoring system for clinical next generation sequencing","display_name":"ChronQC: a quality control monitoring system for clinical next generation sequencing","publication_year":2017,"publication_date":"2017-12-27","ids":{"openalex":"https://openalex.org/W2778576074","doi":"https://doi.org/10.1093/bioinformatics/btx843","mag":"2778576074","pmid":"https://pubmed.ncbi.nlm.nih.gov/29300845"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btx843","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btx843","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/10/1799/25118254/btx843.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/34/10/1799/25118254/btx843.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5077106450","display_name":"Nilesh R. Tawari","orcid":"https://orcid.org/0000-0002-1127-0765"},"institutions":[{"id":"https://openalex.org/I66068411","display_name":"Genome Institute of Singapore","ror":"https://ror.org/05k8wg936","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I2801752549","https://openalex.org/I66068411"]}],"countries":["SG"],"is_corresponding":true,"raw_author_name":"Nilesh R Tawari","raw_affiliation_strings":["Computational and Systems Biology, Genome Institute of Singapore, Genome, #02-01, Singapore, Singapore"],"affiliations":[{"raw_affiliation_string":"Computational and Systems Biology, Genome Institute of Singapore, Genome, #02-01, Singapore, Singapore","institution_ids":["https://openalex.org/I66068411"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066039323","display_name":"Justine Jia Wen Seow","orcid":"https://orcid.org/0000-0003-2913-3803"},"institutions":[{"id":"https://openalex.org/I66068411","display_name":"Genome Institute of Singapore","ror":"https://ror.org/05k8wg936","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I2801752549","https://openalex.org/I66068411"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Justine Jia Wen Seow","raw_affiliation_strings":["Computational and Systems Biology, Genome Institute of Singapore, Genome, #02-01, Singapore, Singapore"],"affiliations":[{"raw_affiliation_string":"Computational and Systems Biology, Genome Institute of Singapore, Genome, #02-01, Singapore, Singapore","institution_ids":["https://openalex.org/I66068411"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028537997","display_name":"Perumal Dharuman","orcid":null},"institutions":[{"id":"https://openalex.org/I66068411","display_name":"Genome Institute of Singapore","ror":"https://ror.org/05k8wg936","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I2801752549","https://openalex.org/I66068411"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Dharuman Perumal","raw_affiliation_strings":["Computational and Systems Biology, Genome Institute of Singapore, Genome, #02-01, Singapore, Singapore"],"affiliations":[{"raw_affiliation_string":"Computational and Systems Biology, Genome Institute of Singapore, Genome, #02-01, Singapore, Singapore","institution_ids":["https://openalex.org/I66068411"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086673296","display_name":"Jack Ling Ow","orcid":null},"institutions":[{"id":"https://openalex.org/I66068411","display_name":"Genome Institute of Singapore","ror":"https://ror.org/05k8wg936","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I2801752549","https://openalex.org/I66068411"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Jack L Ow","raw_affiliation_strings":["Computational and Systems Biology, Genome Institute of Singapore, Genome, #02-01, Singapore, Singapore"],"affiliations":[{"raw_affiliation_string":"Computational and Systems Biology, Genome Institute of Singapore, Genome, #02-01, Singapore, Singapore","institution_ids":["https://openalex.org/I66068411"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088919287","display_name":"Shimin Ang","orcid":"https://orcid.org/0000-0002-8290-274X"},"institutions":[{"id":"https://openalex.org/I66068411","display_name":"Genome Institute of Singapore","ror":"https://ror.org/05k8wg936","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I2801752549","https://openalex.org/I66068411"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Shimin Ang","raw_affiliation_strings":["Computational and Systems Biology, Genome Institute of Singapore, Genome, #02-01, Singapore, Singapore"],"affiliations":[{"raw_affiliation_string":"Computational and Systems Biology, Genome Institute of Singapore, Genome, #02-01, Singapore, Singapore","institution_ids":["https://openalex.org/I66068411"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064304735","display_name":"Arun George Devasia","orcid":null},"institutions":[{"id":"https://openalex.org/I66068411","display_name":"Genome Institute of Singapore","ror":"https://ror.org/05k8wg936","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I2801752549","https://openalex.org/I66068411"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Arun George Devasia","raw_affiliation_strings":["Computational and Systems Biology, Genome Institute of Singapore, Genome, #02-01, Singapore, Singapore"],"affiliations":[{"raw_affiliation_string":"Computational and Systems Biology, Genome Institute of Singapore, Genome, #02-01, Singapore, Singapore","institution_ids":["https://openalex.org/I66068411"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101740308","display_name":"Pauline C. Ng","orcid":"https://orcid.org/0009-0006-5345-0031"},"institutions":[{"id":"https://openalex.org/I66068411","display_name":"Genome Institute of Singapore","ror":"https://ror.org/05k8wg936","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I2801752549","https://openalex.org/I66068411"]}],"countries":["SG"],"is_corresponding":true,"raw_author_name":"Pauline C Ng","raw_affiliation_strings":["Computational and Systems Biology, Genome Institute of Singapore, Genome, #02-01, Singapore, Singapore"],"affiliations":[{"raw_affiliation_string":"Computational and Systems Biology, Genome Institute of Singapore, Genome, #02-01, Singapore, Singapore","institution_ids":["https://openalex.org/I66068411"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5077106450","https://openalex.org/A5101740308"],"corresponding_institution_ids":["https://openalex.org/I66068411"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":0.0851,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.45100593,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":95},"biblio":{"volume":"34","issue":"10","first_page":"1799","last_page":"1800"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11642","display_name":"Genomics and Rare Diseases","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9940999746322632,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/python","display_name":"Python (programming language)","score":0.8850725889205933},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7515711784362793},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.4902658760547638},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.43432703614234924},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.37244993448257446},{"id":"https://openalex.org/keywords/real-time-computing","display_name":"Real-time computing","score":0.3414027988910675}],"concepts":[{"id":"https://openalex.org/C519991488","wikidata":"https://www.wikidata.org/wiki/Q28865","display_name":"Python (programming language)","level":2,"score":0.8850725889205933},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7515711784362793},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.4902658760547638},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.43432703614234924},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.37244993448257446},{"id":"https://openalex.org/C79403827","wikidata":"https://www.wikidata.org/wiki/Q3988","display_name":"Real-time computing","level":1,"score":0.3414027988910675}],"mesh":[{"descriptor_ui":"D000068598","descriptor_name":"Data Accuracy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000068598","descriptor_name":"Data Accuracy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000068598","descriptor_name":"Data Accuracy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011786","descriptor_name":"Quality Control","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011786","descriptor_name":"Quality Control","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011786","descriptor_name":"Quality Control","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btx843","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btx843","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/10/1799/25118254/btx843.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:29300845","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29300845","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btx843","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btx843","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/10/1799/25118254/btx843.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.4099999964237213,"display_name":"Industry, innovation and infrastructure","id":"https://metadata.un.org/sdg/9"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320335846","display_name":"Biomedical Research Council","ror":"https://ror.org/03xy0wx88"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2778576074.pdf","grobid_xml":"https://content.openalex.org/works/W2778576074.grobid-xml"},"referenced_works_count":5,"referenced_works":["https://openalex.org/W2109194250","https://openalex.org/W2111281047","https://openalex.org/W2432815617","https://openalex.org/W2514978364","https://openalex.org/W2607658156"],"related_works":["https://openalex.org/W2341492732","https://openalex.org/W3187193180","https://openalex.org/W106542691","https://openalex.org/W4287027380","https://openalex.org/W1699080303","https://openalex.org/W4297799326","https://openalex.org/W3116064965","https://openalex.org/W3193760048","https://openalex.org/W4285822516","https://openalex.org/W2551200859"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2019,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
