{"id":"https://openalex.org/W2774750904","doi":"https://doi.org/10.1093/bioinformatics/btx769","title":"Model-based design of bistable cell factories for metabolic engineering","display_name":"Model-based design of bistable cell factories for metabolic engineering","publication_year":2017,"publication_date":"2017-12-01","ids":{"openalex":"https://openalex.org/W2774750904","doi":"https://doi.org/10.1093/bioinformatics/btx769","mag":"2774750904","pmid":"https://pubmed.ncbi.nlm.nih.gov/29220508"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btx769","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btx769","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/8/1363/25120052/btx769.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/34/8/1363/25120052/btx769.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100701774","display_name":"Shyam Srinivasan","orcid":"https://orcid.org/0000-0002-8069-5628"},"institutions":[{"id":"https://openalex.org/I185261750","display_name":"University of Toronto","ror":"https://ror.org/03dbr7087","country_code":"CA","type":"education","lineage":["https://openalex.org/I185261750"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Shyam Srinivasan","raw_affiliation_strings":["Department of Chemical Engineering and Applied Chemistry, University of Toronto, Toronto, ON, Canada"],"affiliations":[{"raw_affiliation_string":"Department of Chemical Engineering and Applied Chemistry, University of Toronto, Toronto, ON, Canada","institution_ids":["https://openalex.org/I185261750"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022372167","display_name":"W.R. Cluett","orcid":null},"institutions":[{"id":"https://openalex.org/I185261750","display_name":"University of Toronto","ror":"https://ror.org/03dbr7087","country_code":"CA","type":"education","lineage":["https://openalex.org/I185261750"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"William R Cluett","raw_affiliation_strings":["Department of Chemical Engineering and Applied Chemistry, University of Toronto, Toronto, ON, Canada"],"affiliations":[{"raw_affiliation_string":"Department of Chemical Engineering and Applied Chemistry, University of Toronto, Toronto, ON, Canada","institution_ids":["https://openalex.org/I185261750"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5015634711","display_name":"Radhakrishnan Mahadevan","orcid":"https://orcid.org/0000-0002-1270-9063"},"institutions":[{"id":"https://openalex.org/I185261750","display_name":"University of Toronto","ror":"https://ror.org/03dbr7087","country_code":"CA","type":"education","lineage":["https://openalex.org/I185261750"]}],"countries":["CA"],"is_corresponding":true,"raw_author_name":"Radhakrishnan Mahadevan","raw_affiliation_strings":["Department of Chemical Engineering and Applied Chemistry, University of Toronto, Toronto, ON, Canada","Institute of Biomaterials and Biomedical Engineering, University of Toronto, Toronto, ON, Canada"],"affiliations":[{"raw_affiliation_string":"Department of Chemical Engineering and Applied Chemistry, University of Toronto, Toronto, ON, Canada","institution_ids":["https://openalex.org/I185261750"]},{"raw_affiliation_string":"Institute of Biomaterials and Biomedical Engineering, University of Toronto, Toronto, ON, Canada","institution_ids":["https://openalex.org/I185261750"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5015634711"],"corresponding_institution_ids":["https://openalex.org/I185261750"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":0.3368,"has_fulltext":true,"cited_by_count":5,"citation_normalized_percentile":{"value":0.61560654,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":95},"biblio":{"volume":"34","issue":"8","first_page":"1363","last_page":"1371"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11663","display_name":"Viral Infectious Diseases and Gene Expression in Insects","score":0.9926999807357788,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/bistability","display_name":"Bistability","score":0.8218909502029419},{"id":"https://openalex.org/keywords/metabolic-engineering","display_name":"Metabolic engineering","score":0.6214926838874817},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5536813139915466},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.18591243028640747},{"id":"https://openalex.org/keywords/materials-science","display_name":"Materials science","score":0.12232667207717896},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.09080782532691956}],"concepts":[{"id":"https://openalex.org/C97292510","wikidata":"https://www.wikidata.org/wiki/Q2304620","display_name":"Bistability","level":2,"score":0.8218909502029419},{"id":"https://openalex.org/C6350086","wikidata":"https://www.wikidata.org/wiki/Q6822347","display_name":"Metabolic engineering","level":3,"score":0.6214926838874817},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5536813139915466},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.18591243028640747},{"id":"https://openalex.org/C192562407","wikidata":"https://www.wikidata.org/wiki/Q228736","display_name":"Materials science","level":0,"score":0.12232667207717896},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.09080782532691956},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C49040817","wikidata":"https://www.wikidata.org/wiki/Q193091","display_name":"Optoelectronics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D007700","descriptor_name":"Kinetics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007700","descriptor_name":"Kinetics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007700","descriptor_name":"Kinetics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D060847","descriptor_name":"Metabolic Engineering","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D060847","descriptor_name":"Metabolic Engineering","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D060847","descriptor_name":"Metabolic Engineering","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btx769","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btx769","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/8/1363/25120052/btx769.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:29220508","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29220508","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:utoronto.scholaris.ca:1807/81157","is_oa":true,"landing_page_url":"http://hdl.handle.net/1807/81157","pdf_url":"https://utoronto.scholaris.ca/bitstreams/518d3ca7-69ee-40f0-8ebb-faee5894019e/download","source":{"id":"https://openalex.org/S7407055458","display_name":"TSpace","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Article Post-Print"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btx769","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btx769","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/8/1363/25120052/btx769.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1018441846","display_name":null,"funder_award_id":"Innovation.","funder_id":"https://openalex.org/F4320334593","funder_display_name":"Natural Sciences and Engineering Research Council of Canada"},{"id":"https://openalex.org/G2165548363","display_name":null,"funder_award_id":"Canada","funder_id":"https://openalex.org/F4320334593","funder_display_name":"Natural Sciences and Engineering Research Council of Canada"},{"id":"https://openalex.org/G4472667909","display_name":null,"funder_award_id":"CREATE","funder_id":"https://openalex.org/F4320334593","funder_display_name":"Natural Sciences and Engineering Research Council of Canada"},{"id":"https://openalex.org/G8284766523","display_name":null,"funder_award_id":"(NSERC)","funder_id":"https://openalex.org/F4320334593","funder_display_name":"Natural Sciences and Engineering Research Council of Canada"}],"funders":[{"id":"https://openalex.org/F4320334593","display_name":"Natural Sciences and Engineering Research Council of Canada","ror":"https://ror.org/01h531d29"},{"id":"https://openalex.org/F4320335828","display_name":"Max Planck Institute for Dynamics of Complex Technical Systems Magdeburg","ror":"https://ror.org/030h7k016"},{"id":"https://openalex.org/F4320336370","display_name":"Ontario Ministry of Research and Innovation","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2774750904.pdf","grobid_xml":"https://content.openalex.org/works/W2774750904.grobid-xml"},"referenced_works_count":43,"referenced_works":["https://openalex.org/W843706175","https://openalex.org/W965551521","https://openalex.org/W1498887287","https://openalex.org/W1749639859","https://openalex.org/W1826266252","https://openalex.org/W1922871238","https://openalex.org/W1963572891","https://openalex.org/W1970661255","https://openalex.org/W1987811288","https://openalex.org/W1987938204","https://openalex.org/W2001357509","https://openalex.org/W2012600591","https://openalex.org/W2025783683","https://openalex.org/W2030416317","https://openalex.org/W2032799661","https://openalex.org/W2039230661","https://openalex.org/W2061425021","https://openalex.org/W2064483836","https://openalex.org/W2081696580","https://openalex.org/W2090628795","https://openalex.org/W2097722513","https://openalex.org/W2112262143","https://openalex.org/W2117597548","https://openalex.org/W2122873982","https://openalex.org/W2124533460","https://openalex.org/W2124849619","https://openalex.org/W2137855502","https://openalex.org/W2140697098","https://openalex.org/W2141472526","https://openalex.org/W2167900930","https://openalex.org/W2174873063","https://openalex.org/W2200093982","https://openalex.org/W2206933645","https://openalex.org/W2233438185","https://openalex.org/W2309535242","https://openalex.org/W2531882499","https://openalex.org/W2561548155","https://openalex.org/W2573984017","https://openalex.org/W2582463890","https://openalex.org/W2604687419","https://openalex.org/W2702565067","https://openalex.org/W4214727197","https://openalex.org/W6689553506"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W4224217224","https://openalex.org/W3118640947","https://openalex.org/W4388308731","https://openalex.org/W2042003698","https://openalex.org/W1964519618","https://openalex.org/W1969697984","https://openalex.org/W3048730783","https://openalex.org/W1992416820","https://openalex.org/W3094197880"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1}],"updated_date":"2026-04-18T07:56:08.524223","created_date":"2025-10-10T00:00:00"}
