{"id":"https://openalex.org/W2770261575","doi":"https://doi.org/10.1093/bioinformatics/btx731","title":"DDR: efficient computational method to predict drug\u2013target interactions using graph mining and machine learning approaches","display_name":"DDR: efficient computational method to predict drug\u2013target interactions using graph mining and machine learning approaches","publication_year":2017,"publication_date":"2017-11-23","ids":{"openalex":"https://openalex.org/W2770261575","doi":"https://doi.org/10.1093/bioinformatics/btx731","mag":"2770261575","pmid":"https://pubmed.ncbi.nlm.nih.gov/29186331"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btx731","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btx731","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/7/1164/28539879/btx731.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/34/7/1164/28539879/btx731.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5067922507","display_name":"Rawan S. Olayan","orcid":"https://orcid.org/0000-0001-9148-2129"},"institutions":[{"id":"https://openalex.org/I71920554","display_name":"King Abdullah University of Science and Technology","ror":"https://ror.org/01q3tbs38","country_code":"SA","type":"education","lineage":["https://openalex.org/I71920554"]}],"countries":["SA"],"is_corresponding":false,"raw_author_name":"Rawan S Olayan","raw_affiliation_strings":["King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Computer, Electrical and Mathematical Sciences and Engineering (CEMSE) Division, Thuwal, Saudi Arabia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Computer, Electrical and Mathematical Sciences and Engineering (CEMSE) Division, Thuwal, Saudi Arabia","institution_ids":["https://openalex.org/I71920554"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036736055","display_name":"Haitham Ashoor","orcid":"https://orcid.org/0000-0003-2527-0317"},"institutions":[{"id":"https://openalex.org/I4210115256","display_name":"Jackson Laboratory","ror":"https://ror.org/021sy4w91","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210115256"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Haitham Ashoor","raw_affiliation_strings":["The Jackson Laboratory for Genomic Medicine, Farmington, Connecticut, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The Jackson Laboratory for Genomic Medicine, Farmington, Connecticut, USA","institution_ids":["https://openalex.org/I4210115256"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5055569646","display_name":"Vladimir B. Baji\u0107","orcid":"https://orcid.org/0000-0001-5435-4750"},"institutions":[{"id":"https://openalex.org/I71920554","display_name":"King Abdullah University of Science and Technology","ror":"https://ror.org/01q3tbs38","country_code":"SA","type":"education","lineage":["https://openalex.org/I71920554"]}],"countries":["SA"],"is_corresponding":true,"raw_author_name":"Vladimir B Bajic","raw_affiliation_strings":["King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Computer, Electrical and Mathematical Sciences and Engineering (CEMSE) Division, Thuwal, Saudi Arabia"],"raw_orcid":"https://orcid.org/0000-0001-5435-4750","affiliations":[{"raw_affiliation_string":"King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Computer, Electrical and Mathematical Sciences and Engineering (CEMSE) Division, Thuwal, Saudi Arabia","institution_ids":["https://openalex.org/I71920554"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5055569646"],"corresponding_institution_ids":["https://openalex.org/I71920554"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":13.6366,"has_fulltext":true,"cited_by_count":232,"citation_normalized_percentile":{"value":0.99218078,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"34","issue":"7","first_page":"1164","last_page":"1173"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9200000166893005,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9200000166893005,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.04320000112056732,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.011099999770522118,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7352219223976135},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.5772672891616821},{"id":"https://openalex.org/keywords/random-forest","display_name":"Random forest","score":0.5128929615020752},{"id":"https://openalex.org/keywords/heuristic","display_name":"Heuristic","score":0.5044652223587036},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.4594823122024536},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.450858473777771},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4442934989929199},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4069262146949768},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.20696261525154114}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7352219223976135},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.5772672891616821},{"id":"https://openalex.org/C169258074","wikidata":"https://www.wikidata.org/wiki/Q245748","display_name":"Random forest","level":2,"score":0.5128929615020752},{"id":"https://openalex.org/C173801870","wikidata":"https://www.wikidata.org/wiki/Q201413","display_name":"Heuristic","level":2,"score":0.5044652223587036},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.4594823122024536},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.450858473777771},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4442934989929199},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4069262146949768},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.20696261525154114},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004347","descriptor_name":"Drug Interactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004347","descriptor_name":"Drug Interactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004347","descriptor_name":"Drug Interactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019540","descriptor_name":"Area Under Curve","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019540","descriptor_name":"Area Under Curve","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019540","descriptor_name":"Area Under Curve","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":7,"locations":[{"id":"doi:10.1093/bioinformatics/btx731","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btx731","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/7/1164/28539879/btx731.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:29186331","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29186331","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmid:29917050","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29917050","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:europepmc.org:4955322","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5998943","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:mouseion.jax.org:stfb2018-1152","is_oa":true,"landing_page_url":"https://mouseion.jax.org/stfb2018/155","pdf_url":null,"source":{"id":"https://openalex.org/S4377196421","display_name":"The Mouseion at the JAXlibrary (Jackson Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210115256","host_organization_name":"Jackson Laboratory","host_organization_lineage":["https://openalex.org/I4210115256"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Faculty Research 2018","raw_type":"text"},{"id":"pmh:oai:pubmedcentral.nih.gov:6198857","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6198857","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:repository.kaust.edu.sa:10754/626259","is_oa":true,"landing_page_url":"http://hdl.handle.net/10754/626259","pdf_url":null,"source":{"id":"https://openalex.org/S4306401596","display_name":"King Abdullah University of Science and Technology Repository (King Abdullah University of Science and Technology)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I71920554","host_organization_name":"King Abdullah University of Science and Technology","host_organization_lineage":["https://openalex.org/I71920554"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Article"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btx731","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btx731","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/7/1164/28539879/btx731.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1393855386","display_name":null,"funder_award_id":"URF/1/1976-02","funder_id":"https://openalex.org/F4320322320","funder_display_name":"King Abdullah University of Science and Technology"},{"id":"https://openalex.org/G1615897265","display_name":null,"funder_award_id":"BAS/1/1606-01-01","funder_id":"https://openalex.org/F4320322320","funder_display_name":"King Abdullah University of Science and Technology"},{"id":"https://openalex.org/G2059412472","display_name":null,"funder_award_id":"URF/1/1976","funder_id":"https://openalex.org/F4320322320","funder_display_name":"King Abdullah University of Science and Technology"}],"funders":[{"id":"https://openalex.org/F4320322320","display_name":"King Abdullah University of Science and Technology","ror":"https://ror.org/01q3tbs38"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2770261575.pdf","grobid_xml":"https://content.openalex.org/works/W2770261575.grobid-xml"},"referenced_works_count":73,"referenced_works":["https://openalex.org/W1928552520","https://openalex.org/W1968682237","https://openalex.org/W1970148391","https://openalex.org/W1976582164","https://openalex.org/W1984084871","https://openalex.org/W1987219048","https://openalex.org/W2009113274","https://openalex.org/W2009313526","https://openalex.org/W2018408116","https://openalex.org/W2035670580","https://openalex.org/W2035753075","https://openalex.org/W2036595331","https://openalex.org/W2038252445","https://openalex.org/W2052214665","https://openalex.org/W2063149926","https://openalex.org/W2079745490","https://openalex.org/W2081969016","https://openalex.org/W2088632292","https://openalex.org/W2096541451","https://openalex.org/W2101234009","https://openalex.org/W2106029302","https://openalex.org/W2108069034","https://openalex.org/W2109991441","https://openalex.org/W2134206588","https://openalex.org/W2139516171","https://openalex.org/W2139736926","https://openalex.org/W2144000913","https://openalex.org/W2147405665","https://openalex.org/W2151357092","https://openalex.org/W2153838454","https://openalex.org/W2154718035","https://openalex.org/W2154896031","https://openalex.org/W2155157373","https://openalex.org/W2155958387","https://openalex.org/W2161607603","https://openalex.org/W2162011385","https://openalex.org/W2165125496","https://openalex.org/W2165674132","https://openalex.org/W2166550586","https://openalex.org/W2167212630","https://openalex.org/W2183717576","https://openalex.org/W2201456513","https://openalex.org/W2208662536","https://openalex.org/W2256119113","https://openalex.org/W2256553158","https://openalex.org/W2259538443","https://openalex.org/W2288135941","https://openalex.org/W2295730657","https://openalex.org/W2302413701","https://openalex.org/W2336207313","https://openalex.org/W2343557959","https://openalex.org/W2413583538","https://openalex.org/W2413655681","https://openalex.org/W2419892062","https://openalex.org/W2472351724","https://openalex.org/W2479117119","https://openalex.org/W2549713104","https://openalex.org/W2558217333","https://openalex.org/W2566823781","https://openalex.org/W2568475068","https://openalex.org/W2576544908","https://openalex.org/W2583168750","https://openalex.org/W2605952223","https://openalex.org/W2607497028","https://openalex.org/W2915806464","https://openalex.org/W2962746482","https://openalex.org/W2974658886","https://openalex.org/W2982619390","https://openalex.org/W6675354045","https://openalex.org/W6686420396","https://openalex.org/W6687587607","https://openalex.org/W6697600683","https://openalex.org/W6715837248"],"related_works":["https://openalex.org/W3193043704","https://openalex.org/W4386259002","https://openalex.org/W1546989560","https://openalex.org/W3171520305","https://openalex.org/W3135126032","https://openalex.org/W1924178503","https://openalex.org/W4308716060","https://openalex.org/W4280648719","https://openalex.org/W4386937079","https://openalex.org/W4394984040"],"abstract_inverted_index":{"Motivation:":[0],"Finding":[1],"computationally":[2],"drug-target":[3],"interactions":[4],"(DTIs)":[5],"is":[6,47,93],"a":[7,37,53,85,89,96,109],"convenient":[8],"strategy":[9],"to":[10,77,99,154,225],"identify":[11,226],"new":[12,175],"DTIs":[13,59,162,190],"at":[14,238,248],"low":[15],"cost":[16],"with":[17,60],"reasonable":[18],"accuracy.":[19,45],"However,":[20],"the":[21,27,42,50,119,132,138,149,155,166,180,183,208],"current":[22],"DTI":[23,43,120],"prediction":[24,31,44],"methods":[25],"suffer":[26],"high":[28],"false":[29],"positive":[30],"rate.":[32],"Results:":[33],"We":[34],"developed":[35],"DDR,":[36],"novel":[38,212],"method":[39,76,159,224],"that":[40,56,145,216],"improves":[41],"DDR":[46,71,83,107,146,211,217],"based":[48],"on":[49],"use":[51],"of":[52,91,104,125,135,199,207],"heterogeneous":[54,121],"graph":[55],"contains":[57],"known":[58,186],"multiple":[61,66],"similarities":[62,67,92],"between":[63,68,191],"drugs":[64,167,181],"and":[65,131,176,182,230,234],"target":[69],"proteins.":[70],"applies":[72,108],"non-linear":[73],"similarity":[74],"fusion":[75],"combine":[78],"different":[79,114],"similarities.":[80,105],"Before":[81],"fusion,":[82],"performs":[84],"pre-processing":[86],"step":[87],"where":[88],"subset":[90],"selected":[94],"in":[95],"heuristic":[97],"process":[98],"obtain":[100],"an":[101,222],"optimized":[102],"combination":[103],"Then,":[106],"random":[110],"forest":[111],"model":[112],"using":[113],"graph-based":[115],"features":[116],"extracted":[117],"from":[118],"graph.":[122],"Using":[123,196],"5-repeats":[124],"10-fold":[126],"cross-validation,":[127],"three":[128],"testing":[129],"setups,":[130],"weighted":[133],"average":[134],"area":[136],"under":[137],"precision-recall":[139],"curve":[140],"(AUPR)":[141],"scores,":[142],"we":[143,201],"show":[144],"significantly":[147],"reduces":[148],"AUPR":[150],"score":[151],"error":[152],"relative":[153],"next":[156],"best":[157],"start-of-the-art":[158],"for":[160],"predicting":[161],"by":[163,170,177],"34%":[164,178],"when":[165,172,179],"are":[168,174,185,193,236,246],"new,":[169],"23%":[171],"targets":[173,184],"but":[187],"not":[188,194],"all":[189],"them":[192],"known.":[195],"independent":[197],"sources":[198],"evidence,":[200],"verify":[202],"as":[203,221],"correct":[204,227],"22":[205],"out":[206],"top":[209],"25":[210],"predictions.":[213],"This":[214],"suggests":[215],"can":[218],"be":[219],"used":[220],"efficient":[223],"DTIs.":[228],"Availability":[229],"implementation:":[231],"The":[232],"data":[233,245],"code":[235],"provided":[237],"https://bitbucket.org/RSO24/ddr/.":[239],"Contact:":[240],"vladimir.bajic@kaust.edu.sa.":[241],"Supplementary":[242,244],"information:":[243],"available":[247],"Bioinformatics":[249],"online.":[250]},"counts_by_year":[{"year":2026,"cited_by_count":4},{"year":2025,"cited_by_count":20},{"year":2024,"cited_by_count":33},{"year":2023,"cited_by_count":33},{"year":2022,"cited_by_count":35},{"year":2021,"cited_by_count":50},{"year":2020,"cited_by_count":31},{"year":2019,"cited_by_count":16},{"year":2018,"cited_by_count":10}],"updated_date":"2026-06-02T09:04:35.204637","created_date":"2025-10-10T00:00:00"}
