{"id":"https://openalex.org/W2949059287","doi":"https://doi.org/10.1093/bioinformatics/btx712","title":"Identifying structural variants using linked-read sequencing data","display_name":"Identifying structural variants using linked-read sequencing data","publication_year":2017,"publication_date":"2017-11-03","ids":{"openalex":"https://openalex.org/W2949059287","doi":"https://doi.org/10.1093/bioinformatics/btx712","mag":"2949059287","pmid":"https://pubmed.ncbi.nlm.nih.gov/29112732"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btx712","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btx712","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/2/353/25114367/btx712.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/34/2/353/25114367/btx712.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5090430288","display_name":"Rebecca Elyanow","orcid":"https://orcid.org/0000-0001-8877-7188"},"institutions":[{"id":"https://openalex.org/I27804330","display_name":"Brown University","ror":"https://ror.org/05gq02987","country_code":"US","type":"education","lineage":["https://openalex.org/I27804330"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Rebecca Elyanow","raw_affiliation_strings":["Center for Computational Molecular Biology, Brown University, Providence, RI, USA"],"affiliations":[{"raw_affiliation_string":"Center for Computational Molecular Biology, Brown University, Providence, RI, USA","institution_ids":["https://openalex.org/I27804330"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103852481","display_name":"Hsin-Ta Wu","orcid":null},"institutions":[{"id":"https://openalex.org/I27804330","display_name":"Brown University","ror":"https://ror.org/05gq02987","country_code":"US","type":"education","lineage":["https://openalex.org/I27804330"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hsin-Ta Wu","raw_affiliation_strings":["Center for Computational Molecular Biology, Brown University, Providence, RI, USA"],"affiliations":[{"raw_affiliation_string":"Center for Computational Molecular Biology, Brown University, Providence, RI, USA","institution_ids":["https://openalex.org/I27804330"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5025899028","display_name":"Benjamin J. Raphael","orcid":"https://orcid.org/0000-0003-1274-048X"},"institutions":[{"id":"https://openalex.org/I20089843","display_name":"Princeton University","ror":"https://ror.org/00hx57361","country_code":"US","type":"education","lineage":["https://openalex.org/I20089843"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Benjamin J Raphael","raw_affiliation_strings":["Department of Computer Science, Princeton University, Princeton, NJ, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Princeton University, Princeton, NJ, USA","institution_ids":["https://openalex.org/I20089843"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5090430288"],"corresponding_institution_ids":["https://openalex.org/I27804330"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":4.1418,"has_fulltext":false,"cited_by_count":91,"citation_normalized_percentile":{"value":0.95056431,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":97,"max":100},"biblio":{"volume":"34","issue":"2","first_page":"353","last_page":"360"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11642","display_name":"Genomics and Rare Diseases","score":0.9959999918937683,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11213","display_name":"Genomic variations and chromosomal abnormalities","score":0.983299970626831,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6330492496490479},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.48343953490257263},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.22447022795677185}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6330492496490479},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.48343953490257263},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.22447022795677185}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btx712","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btx712","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/2/353/25114367/btx712.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:29112732","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29112732","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:5860216","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5860216","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btx712","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btx712","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/2/353/25114367/btx712.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G6287737109","display_name":null,"funder_award_id":"CCF-1053753","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G8756574588","display_name":null,"funder_award_id":"R01HG005690, R01HG007069 and R01CA180776","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320306133","display_name":"Burroughs Wellcome Fund","ror":"https://ror.org/01d35cw23"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2949059287.pdf","grobid_xml":"https://content.openalex.org/works/W2949059287.grobid-xml"},"referenced_works_count":39,"referenced_works":["https://openalex.org/W1544712555","https://openalex.org/W1912672559","https://openalex.org/W1969665013","https://openalex.org/W1971321176","https://openalex.org/W1973067702","https://openalex.org/W1974773495","https://openalex.org/W1983943352","https://openalex.org/W2011957420","https://openalex.org/W2012328875","https://openalex.org/W2027303387","https://openalex.org/W2065817684","https://openalex.org/W2083870688","https://openalex.org/W2084708009","https://openalex.org/W2104817809","https://openalex.org/W2109948920","https://openalex.org/W2111350087","https://openalex.org/W2114198922","https://openalex.org/W2116387239","https://openalex.org/W2133112449","https://openalex.org/W2135640980","https://openalex.org/W2143307936","https://openalex.org/W2146005104","https://openalex.org/W2150506261","https://openalex.org/W2153994884","https://openalex.org/W2154397429","https://openalex.org/W2159640103","https://openalex.org/W2159794180","https://openalex.org/W2164291580","https://openalex.org/W2196990575","https://openalex.org/W2203319208","https://openalex.org/W2230465815","https://openalex.org/W2264578395","https://openalex.org/W2559529626","https://openalex.org/W2950569192","https://openalex.org/W2950682063","https://openalex.org/W2950833487","https://openalex.org/W4240700790","https://openalex.org/W6646348310","https://openalex.org/W6672094355"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W4391913857","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W4396696052"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":9},{"year":2023,"cited_by_count":13},{"year":2022,"cited_by_count":9},{"year":2021,"cited_by_count":19},{"year":2020,"cited_by_count":12},{"year":2019,"cited_by_count":19},{"year":2018,"cited_by_count":6}],"updated_date":"2026-03-27T05:58:40.876381","created_date":"2025-10-10T00:00:00"}
