{"id":"https://openalex.org/W2766731985","doi":"https://doi.org/10.1093/bioinformatics/btx694","title":"Visualization portal for genetic variation (VizGVar): a tool for interactive visualization of SNPs and somatic mutations in exons, genes and protein domains","display_name":"Visualization portal for genetic variation (VizGVar): a tool for interactive visualization of SNPs and somatic mutations in exons, genes and protein domains","publication_year":2017,"publication_date":"2017-10-28","ids":{"openalex":"https://openalex.org/W2766731985","doi":"https://doi.org/10.1093/bioinformatics/btx694","mag":"2766731985","pmid":"https://pubmed.ncbi.nlm.nih.gov/29091996"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btx694","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btx694","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/6/1048/25119316/btx694.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/34/6/1048/25119316/btx694.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5027855869","display_name":"A Solano-Roman","orcid":null},"institutions":[{"id":"https://openalex.org/I12912129","display_name":"Northeastern University","ror":"https://ror.org/04t5xt781","country_code":"US","type":"education","lineage":["https://openalex.org/I12912129"]},{"id":"https://openalex.org/I145372079","display_name":"Instituto Tecnol\u00f3gico de Costa Rica","ror":"https://ror.org/04zhrfn38","country_code":"CR","type":"education","lineage":["https://openalex.org/I145372079"]}],"countries":["CR","US"],"is_corresponding":true,"raw_author_name":"Antonio Solano-Rom\u00e1n","raw_affiliation_strings":["Department of Art + Design, Northeastern University, Boston, MA, USA","Department of Industrial Design Engineering, Costa Rica Institute of Technology (TEC), Cartago, Costa Rica"],"affiliations":[{"raw_affiliation_string":"Department of Art + Design, Northeastern University, Boston, MA, USA","institution_ids":["https://openalex.org/I12912129"]},{"raw_affiliation_string":"Department of Industrial Design Engineering, Costa Rica Institute of Technology (TEC), Cartago, Costa Rica","institution_ids":["https://openalex.org/I145372079"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018182697","display_name":"Ver\u00f3nica Alfaro-Arias","orcid":null},"institutions":[{"id":"https://openalex.org/I145372079","display_name":"Instituto Tecnol\u00f3gico de Costa Rica","ror":"https://ror.org/04zhrfn38","country_code":"CR","type":"education","lineage":["https://openalex.org/I145372079"]}],"countries":["CR"],"is_corresponding":false,"raw_author_name":"Ver\u00f3nica Alfaro-Arias","raw_affiliation_strings":["Department of Industrial Design Engineering, Costa Rica Institute of Technology (TEC), Cartago, Costa Rica"],"affiliations":[{"raw_affiliation_string":"Department of Industrial Design Engineering, Costa Rica Institute of Technology (TEC), Cartago, Costa Rica","institution_ids":["https://openalex.org/I145372079"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062931277","display_name":"Carlos Cruz-Castillo","orcid":"https://orcid.org/0000-0002-6723-0076"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Carlos Cruz-Castillo","raw_affiliation_strings":["CENFOTEC University, San Jos\u00e9, Costa Rica"],"affiliations":[{"raw_affiliation_string":"CENFOTEC University, San Jos\u00e9, Costa Rica","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5013222761","display_name":"Allan Orozco-Solano","orcid":null},"institutions":[{"id":"https://openalex.org/I31944674","display_name":"Universidad de Costa Rica","ror":"https://ror.org/02yzgww51","country_code":"CR","type":"education","lineage":["https://openalex.org/I31944674"]},{"id":"https://openalex.org/I63634437","display_name":"Universidad Aut\u00f3noma de Madrid","ror":"https://ror.org/01cby8j38","country_code":"ES","type":"education","lineage":["https://openalex.org/I63634437"]}],"countries":["CR","ES"],"is_corresponding":true,"raw_author_name":"Allan Orozco-Solano","raw_affiliation_strings":["Department of Molecular Biology, Autonomous University of Madrid, Cantoblanco, Madrid, Spain","School of Health Technologies, Faculty of Medicine, University of Costa Rica, San Pedro de Montes de Oca, San Jos\u00e9, Costa Rica"],"affiliations":[{"raw_affiliation_string":"Department of Molecular Biology, Autonomous University of Madrid, Cantoblanco, Madrid, Spain","institution_ids":["https://openalex.org/I63634437"]},{"raw_affiliation_string":"School of Health Technologies, Faculty of Medicine, University of Costa Rica, San Pedro de Montes de Oca, San Jos\u00e9, Costa Rica","institution_ids":["https://openalex.org/I31944674"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5013222761","https://openalex.org/A5027855869"],"corresponding_institution_ids":["https://openalex.org/I12912129","https://openalex.org/I145372079","https://openalex.org/I31944674","https://openalex.org/I63634437"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":0.2127,"has_fulltext":true,"cited_by_count":2,"citation_normalized_percentile":{"value":0.54831197,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":96},"biblio":{"volume":"34","issue":"6","first_page":"1048","last_page":"1049"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9962999820709229,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9962999820709229,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9926999807357788,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9866999983787537,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/ensembl","display_name":"Ensembl","score":0.803364634513855},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.7012248039245605},{"id":"https://openalex.org/keywords/javascript","display_name":"JavaScript","score":0.5993658304214478},{"id":"https://openalex.org/keywords/genome-browser","display_name":"Genome browser","score":0.5666556358337402},{"id":"https://openalex.org/keywords/interactive-visualization","display_name":"Interactive visualization","score":0.5116475224494934},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5032481551170349},{"id":"https://openalex.org/keywords/single-nucleotide-polymorphism","display_name":"Single-nucleotide polymorphism","score":0.44252049922943115},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4294499456882477},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.40802058577537537},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.39878296852111816},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.3774203360080719},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.3322581648826599},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.2494831383228302},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.24606013298034668},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.24231961369514465},{"id":"https://openalex.org/keywords/genotype","display_name":"Genotype","score":0.08489328622817993}],"concepts":[{"id":"https://openalex.org/C141674004","wikidata":"https://www.wikidata.org/wiki/Q1344256","display_name":"Ensembl","level":5,"score":0.803364634513855},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.7012248039245605},{"id":"https://openalex.org/C544833334","wikidata":"https://www.wikidata.org/wiki/Q2005","display_name":"JavaScript","level":2,"score":0.5993658304214478},{"id":"https://openalex.org/C2781148417","wikidata":"https://www.wikidata.org/wiki/Q5533486","display_name":"Genome browser","level":5,"score":0.5666556358337402},{"id":"https://openalex.org/C64073096","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Interactive visualization","level":3,"score":0.5116475224494934},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5032481551170349},{"id":"https://openalex.org/C153209595","wikidata":"https://www.wikidata.org/wiki/Q501128","display_name":"Single-nucleotide polymorphism","level":4,"score":0.44252049922943115},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4294499456882477},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.40802058577537537},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.39878296852111816},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.3774203360080719},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.3322581648826599},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.2494831383228302},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.24606013298034668},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.24231961369514465},{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.08489328622817993}],"mesh":[{"descriptor_ui":"D000072417","descriptor_name":"Protein Domains","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000072417","descriptor_name":"Protein Domains","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000072417","descriptor_name":"Protein Domains","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005091","descriptor_name":"Exons","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005091","descriptor_name":"Exons","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005091","descriptor_name":"Exons","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009154","descriptor_name":"Mutation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009154","descriptor_name":"Mutation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009154","descriptor_name":"Mutation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btx694","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btx694","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/6/1048/25119316/btx694.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:29091996","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29091996","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btx694","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btx694","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/6/1048/25119316/btx694.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320323217","display_name":"Universidad de Costa Rica","ror":"https://ror.org/02yzgww51"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2766731985.pdf","grobid_xml":"https://content.openalex.org/works/W2766731985.grobid-xml"},"referenced_works_count":3,"referenced_works":["https://openalex.org/W1258432720","https://openalex.org/W2125411892","https://openalex.org/W2333774788"],"related_works":["https://openalex.org/W2462807523","https://openalex.org/W2139297998","https://openalex.org/W2096403311","https://openalex.org/W2468489741","https://openalex.org/W2094069166","https://openalex.org/W1571396434","https://openalex.org/W4360752279","https://openalex.org/W2587542132","https://openalex.org/W2766731985","https://openalex.org/W2336957559"],"abstract_inverted_index":{"asolano@broadinstitute.org":[0],"or":[1],"allan.orozcosolano@ucr.ac.cr.":[2]},"counts_by_year":[{"year":2018,"cited_by_count":2}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
