{"id":"https://openalex.org/W2759334264","doi":"https://doi.org/10.1093/bioinformatics/btx616","title":"On the mechanisms of protein interactions: predicting their affinity from unbound tertiary structures","display_name":"On the mechanisms of protein interactions: predicting their affinity from unbound tertiary structures","publication_year":2017,"publication_date":"2017-09-26","ids":{"openalex":"https://openalex.org/W2759334264","doi":"https://doi.org/10.1093/bioinformatics/btx616","mag":"2759334264","pmid":"https://pubmed.ncbi.nlm.nih.gov/29028891"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btx616","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btx616","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/4/592/25117375/btx616.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/34/4/592/25117375/btx616.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5031156142","display_name":"Manuel Alejandro Mar\u00edn-L\u00f3pez","orcid":"https://orcid.org/0000-0003-0833-3574"},"institutions":[{"id":"https://openalex.org/I170486558","display_name":"Universitat Pompeu Fabra","ror":"https://ror.org/04n0g0b29","country_code":"ES","type":"education","lineage":["https://openalex.org/I170486558"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Manuel Alejandro Mar\u00edn-L\u00f3pez","raw_affiliation_strings":["Structural Bioinformatics Lab, Department of Experimental and Health Science, Universitat Pompeu Fabra, Barcelona, Spain"],"affiliations":[{"raw_affiliation_string":"Structural Bioinformatics Lab, Department of Experimental and Health Science, Universitat Pompeu Fabra, Barcelona, Spain","institution_ids":["https://openalex.org/I170486558"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081228191","display_name":"Joan Planas-Iglesias","orcid":"https://orcid.org/0000-0002-6279-2483"},"institutions":[{"id":"https://openalex.org/I39555362","display_name":"University of Warwick","ror":"https://ror.org/01a77tt86","country_code":"GB","type":"education","lineage":["https://openalex.org/I39555362"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Joan Planas-Iglesias","raw_affiliation_strings":["Division of Metabolic and Vascular Health, University of Warwick, Coventry CV, UK"],"affiliations":[{"raw_affiliation_string":"Division of Metabolic and Vascular Health, University of Warwick, Coventry CV, UK","institution_ids":["https://openalex.org/I39555362"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020663739","display_name":"Joaquim Aguirre\u2010Plans","orcid":"https://orcid.org/0000-0002-1971-1350"},"institutions":[{"id":"https://openalex.org/I170486558","display_name":"Universitat Pompeu Fabra","ror":"https://ror.org/04n0g0b29","country_code":"ES","type":"education","lineage":["https://openalex.org/I170486558"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Joaquim Aguirre-Plans","raw_affiliation_strings":["Structural Bioinformatics Lab, Department of Experimental and Health Science, Universitat Pompeu Fabra, Barcelona, Spain"],"affiliations":[{"raw_affiliation_string":"Structural Bioinformatics Lab, Department of Experimental and Health Science, Universitat Pompeu Fabra, Barcelona, Spain","institution_ids":["https://openalex.org/I170486558"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048998113","display_name":"Jaume Bonet","orcid":"https://orcid.org/0000-0001-5210-4387"},"institutions":[{"id":"https://openalex.org/I5124864","display_name":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne","ror":"https://ror.org/02s376052","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I5124864"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Jaume Bonet","raw_affiliation_strings":["Laboratory of Protein Design and Immunoenginneering, School of Engineering, Ecole Polytechnique Federale de Lausanne, Lausanne, Switzerland"],"affiliations":[{"raw_affiliation_string":"Laboratory of Protein Design and Immunoenginneering, School of Engineering, Ecole Polytechnique Federale de Lausanne, Lausanne, Switzerland","institution_ids":["https://openalex.org/I5124864"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038679061","display_name":"Javier Garc\u0131\u0301a-Garc\u0131\u0301a","orcid":"https://orcid.org/0000-0001-9539-2606"},"institutions":[{"id":"https://openalex.org/I170486558","display_name":"Universitat Pompeu Fabra","ror":"https://ror.org/04n0g0b29","country_code":"ES","type":"education","lineage":["https://openalex.org/I170486558"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Javier Garcia-Garcia","raw_affiliation_strings":["Structural Bioinformatics Lab, Department of Experimental and Health Science, Universitat Pompeu Fabra, Barcelona, Spain"],"affiliations":[{"raw_affiliation_string":"Structural Bioinformatics Lab, Department of Experimental and Health Science, Universitat Pompeu Fabra, Barcelona, Spain","institution_ids":["https://openalex.org/I170486558"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090989775","display_name":"Narc\u00eds Fern\u00e1ndez\u2010Fuentes","orcid":"https://orcid.org/0000-0002-6421-1080"},"institutions":[{"id":"https://openalex.org/I16038530","display_name":"Aberystwyth University","ror":"https://ror.org/015m2p889","country_code":"GB","type":"education","lineage":["https://openalex.org/I16038530"]},{"id":"https://openalex.org/I4210146599","display_name":"Institute of Biological, Environmental and Rural Sciences","ror":"https://ror.org/051wgfj58","country_code":"GB","type":"education","lineage":["https://openalex.org/I16038530","https://openalex.org/I2799693246","https://openalex.org/I4210087105","https://openalex.org/I4210146599"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Narcis Fernandez-Fuentes","raw_affiliation_strings":["Institute of Biological, Environmental and Rural Sciences, Aberystwyth University, Aberystwyth SY, UK"],"affiliations":[{"raw_affiliation_string":"Institute of Biological, Environmental and Rural Sciences, Aberystwyth University, Aberystwyth SY, UK","institution_ids":["https://openalex.org/I16038530","https://openalex.org/I4210146599"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5111840557","display_name":"Baldo Oliva","orcid":null},"institutions":[{"id":"https://openalex.org/I170486558","display_name":"Universitat Pompeu Fabra","ror":"https://ror.org/04n0g0b29","country_code":"ES","type":"education","lineage":["https://openalex.org/I170486558"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Baldo Oliva","raw_affiliation_strings":["Structural Bioinformatics Lab, Department of Experimental and Health Science, Universitat Pompeu Fabra, Barcelona, Spain"],"affiliations":[{"raw_affiliation_string":"Structural Bioinformatics Lab, Department of Experimental and Health Science, Universitat Pompeu Fabra, Barcelona, Spain","institution_ids":["https://openalex.org/I170486558"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5081228191","https://openalex.org/A5111840557"],"corresponding_institution_ids":["https://openalex.org/I170486558","https://openalex.org/I39555362"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":0.7859,"has_fulltext":true,"cited_by_count":16,"citation_normalized_percentile":{"value":0.71895307,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"34","issue":"4","first_page":"592","last_page":"598"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.996999979019165,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/docking","display_name":"Docking (animal)","score":0.6185687184333801},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5392853617668152},{"id":"https://openalex.org/keywords/affinities","display_name":"Affinities","score":0.5022170543670654},{"id":"https://openalex.org/keywords/protein-tertiary-structure","display_name":"Protein tertiary structure","score":0.4768694043159485},{"id":"https://openalex.org/keywords/limiting","display_name":"Limiting","score":0.4713701009750366},{"id":"https://openalex.org/keywords/protein\u2013protein-interaction","display_name":"Protein\u2013protein interaction","score":0.4624713957309723},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.438342809677124},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.43265414237976074},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.35900765657424927},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.30577608942985535},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.2649288773536682}],"concepts":[{"id":"https://openalex.org/C41685203","wikidata":"https://www.wikidata.org/wiki/Q1974042","display_name":"Docking (animal)","level":2,"score":0.6185687184333801},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5392853617668152},{"id":"https://openalex.org/C2780283098","wikidata":"https://www.wikidata.org/wiki/Q4688960","display_name":"Affinities","level":2,"score":0.5022170543670654},{"id":"https://openalex.org/C75599170","wikidata":"https://www.wikidata.org/wiki/Q898483","display_name":"Protein tertiary structure","level":2,"score":0.4768694043159485},{"id":"https://openalex.org/C188198153","wikidata":"https://www.wikidata.org/wiki/Q1613840","display_name":"Limiting","level":2,"score":0.4713701009750366},{"id":"https://openalex.org/C11804247","wikidata":"https://www.wikidata.org/wiki/Q896177","display_name":"Protein\u2013protein interaction","level":2,"score":0.4624713957309723},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.438342809677124},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.43265414237976074},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.35900765657424927},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.30577608942985535},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.2649288773536682},{"id":"https://openalex.org/C159110408","wikidata":"https://www.wikidata.org/wiki/Q121176","display_name":"Nursing","level":1,"score":0.0},{"id":"https://openalex.org/C78519656","wikidata":"https://www.wikidata.org/wiki/Q101333","display_name":"Mechanical engineering","level":1,"score":0.0},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D062105","descriptor_name":"Molecular Docking Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D062105","descriptor_name":"Molecular Docking Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D062105","descriptor_name":"Molecular Docking Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":7,"locations":[{"id":"doi:10.1093/bioinformatics/btx616","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btx616","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/4/592/25117375/btx616.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:29028891","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29028891","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:repositori.upf.edu:10230/34332","is_oa":true,"landing_page_url":"http://hdl.handle.net/10230/34332","pdf_url":null,"source":{"id":"https://openalex.org/S4306402615","display_name":"Repositori digital de la UPF (Universitat Pompeu Fabra)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I170486558","host_organization_name":"Universitat Pompeu Fabra","host_organization_lineage":["https://openalex.org/I170486558"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:wrap.warwick.ac.uk:101480","is_oa":false,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4306400665","display_name":"Warwick Research Archive Portal (University of Warwick)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I39555362","host_organization_name":"University of Warwick","host_organization_lineage":["https://openalex.org/I39555362"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"","raw_type":"Journal Article"},{"id":"pmh:oai:aber.ac.uk:publications/c0d12677-a37e-4d2b-b4e3-754131fc116e","is_oa":true,"landing_page_url":"https://pure.aber.ac.uk/portal/en/publications/on-the-mechanisms-of-protein-interactions(c0d12677-a37e-4d2b-b4e3-754131fc116e).html","pdf_url":"http://pure.aber.ac.uk/ws/files/19266037/watermark.pdf","source":{"id":"https://openalex.org/S4306401660","display_name":"Aberystwyth Research portal (Aberystwyth University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I16038530","host_organization_name":"Aberystwyth University","host_organization_lineage":["https://openalex.org/I16038530"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":""},{"id":"pmh:oai:europepmc.org:4775883","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5860604","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:infoscience.epfl.ch:259567","is_oa":true,"landing_page_url":"http://infoscience.epfl.ch/record/259567","pdf_url":null,"source":{"id":"https://openalex.org/S4306400487","display_name":"Infoscience (Ecole Polytechnique F\u00e9d\u00e9rale de Lausanne)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"WoS","raw_type":"research article"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btx616","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btx616","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/34/4/592/25117375/btx616.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3827505808","display_name":null,"funder_award_id":"FI-DGR2012","funder_id":"https://openalex.org/F4320321505","funder_display_name":"Generalitat de Catalunya"},{"id":"https://openalex.org/G5152578567","display_name":null,"funder_award_id":"FI-DGR","funder_id":"https://openalex.org/F4320321505","funder_display_name":"Generalitat de Catalunya"},{"id":"https://openalex.org/G6001332029","display_name":null,"funder_award_id":"INB 2015-2017","funder_id":"https://openalex.org/F4320321837","funder_display_name":"Ministerio de Econom\u00eda y Competitividad"},{"id":"https://openalex.org/G6756691620","display_name":null,"funder_award_id":"2014SGR1161","funder_id":"https://openalex.org/F4320321837","funder_display_name":"Ministerio de Econom\u00eda y Competitividad"},{"id":"https://openalex.org/G8453233947","display_name":null,"funder_award_id":"BBS/E/W/0012843D","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G8537929528","display_name":null,"funder_award_id":"2014SGR116","funder_id":"https://openalex.org/F4320321505","funder_display_name":"Generalitat de Catalunya"},{"id":"https://openalex.org/G985971609","display_name":null,"funder_award_id":"2014SGR","funder_id":"https://openalex.org/F4320321505","funder_display_name":"Generalitat de Catalunya"}],"funders":[{"id":"https://openalex.org/F4320320279","display_name":"University of Warwick","ror":"https://ror.org/01a77tt86"},{"id":"https://openalex.org/F4320321505","display_name":"Generalitat de Catalunya","ror":"https://ror.org/01bg62x04"},{"id":"https://openalex.org/F4320321837","display_name":"Ministerio de Econom\u00eda y Competitividad","ror":"https://ror.org/034900433"},{"id":"https://openalex.org/F4320329956","display_name":"Ko\u00e7 \u00dcniversitesi","ror":"https://ror.org/00jzwgz36"},{"id":"https://openalex.org/F4320334629","display_name":"Biotechnology and Biological Sciences Research Council","ror":"https://ror.org/00cwqg982"},{"id":"https://openalex.org/F4320334923","display_name":"Instituto de Salud Carlos III","ror":"https://ror.org/00ca2c886"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2759334264.pdf","grobid_xml":"https://content.openalex.org/works/W2759334264.grobid-xml"},"referenced_works_count":53,"referenced_works":["https://openalex.org/W1030883578","https://openalex.org/W1534963014","https://openalex.org/W1815147785","https://openalex.org/W1948562438","https://openalex.org/W1958746655","https://openalex.org/W1961303947","https://openalex.org/W1969425147","https://openalex.org/W1983609086","https://openalex.org/W1983853935","https://openalex.org/W1991540499","https://openalex.org/W2001687061","https://openalex.org/W2010612779","https://openalex.org/W2032549034","https://openalex.org/W2036309115","https://openalex.org/W2048643046","https://openalex.org/W2052349001","https://openalex.org/W2063810968","https://openalex.org/W2064813235","https://openalex.org/W2079449448","https://openalex.org/W2084619201","https://openalex.org/W2088892683","https://openalex.org/W2090183113","https://openalex.org/W2094203741","https://openalex.org/W2099367920","https://openalex.org/W2101234009","https://openalex.org/W2106768806","https://openalex.org/W2110720709","https://openalex.org/W2110943691","https://openalex.org/W2115570685","https://openalex.org/W2117960073","https://openalex.org/W2123742794","https://openalex.org/W2127489230","https://openalex.org/W2128653811","https://openalex.org/W2128796532","https://openalex.org/W2132625528","https://openalex.org/W2134574350","https://openalex.org/W2144775933","https://openalex.org/W2146031422","https://openalex.org/W2151460035","https://openalex.org/W2152830137","https://openalex.org/W2157733131","https://openalex.org/W2163296115","https://openalex.org/W2165948287","https://openalex.org/W2166670554","https://openalex.org/W2172250191","https://openalex.org/W2195516528","https://openalex.org/W2295248490","https://openalex.org/W2343238565","https://openalex.org/W2554019130","https://openalex.org/W2623055862","https://openalex.org/W3099289621","https://openalex.org/W6675354045","https://openalex.org/W6682656086"],"related_works":["https://openalex.org/W51493542","https://openalex.org/W2034043843","https://openalex.org/W2888116067","https://openalex.org/W1974422922","https://openalex.org/W3187431608","https://openalex.org/W3108975412","https://openalex.org/W4309353019","https://openalex.org/W2914490533","https://openalex.org/W3131413015","https://openalex.org/W2114568928"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":8},{"year":2020,"cited_by_count":5},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
