{"id":"https://openalex.org/W2950095536","doi":"https://doi.org/10.1093/bioinformatics/btx481","title":"Predicting novel metabolic pathways through subgraph mining","display_name":"Predicting novel metabolic pathways through subgraph mining","publication_year":2017,"publication_date":"2017-07-26","ids":{"openalex":"https://openalex.org/W2950095536","doi":"https://doi.org/10.1093/bioinformatics/btx481","mag":"2950095536","pmid":"https://pubmed.ncbi.nlm.nih.gov/28961716"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btx481","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btx481","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/33/24/3955/25168568/btx481.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/33/24/3955/25168568/btx481.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5087805344","display_name":"Aravind Sankar","orcid":null},"institutions":[{"id":"https://openalex.org/I24676775","display_name":"Indian Institute of Technology Madras","ror":"https://ror.org/03v0r5n49","country_code":"IN","type":"facility","lineage":["https://openalex.org/I24676775"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Aravind Sankar","raw_affiliation_strings":["Department of Computer Science and Engineering, Indian Institute of Technology (IIT) Madras, Chennai, Tamil Nadu, India"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Indian Institute of Technology (IIT) Madras, Chennai, Tamil Nadu, India","institution_ids":["https://openalex.org/I24676775"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054697900","display_name":"Sayan Ranu","orcid":"https://orcid.org/0000-0003-4147-9372"},"institutions":[{"id":"https://openalex.org/I24676775","display_name":"Indian Institute of Technology Madras","ror":"https://ror.org/03v0r5n49","country_code":"IN","type":"facility","lineage":["https://openalex.org/I24676775"]}],"countries":["IN"],"is_corresponding":true,"raw_author_name":"Sayan Ranu","raw_affiliation_strings":["Department of Computer Science and Engineering, Indian Institute of Technology (IIT) Madras, Chennai, Tamil Nadu, India","Initiative for Biological Systems Engineering (IBSE), Interdisciplinary Laboratory for Data Sciences, Indian Institute of Technology (IIT) Madras, Chennai, Tamil Nadu, India"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Indian Institute of Technology (IIT) Madras, Chennai, Tamil Nadu, India","institution_ids":["https://openalex.org/I24676775"]},{"raw_affiliation_string":"Initiative for Biological Systems Engineering (IBSE), Interdisciplinary Laboratory for Data Sciences, Indian Institute of Technology (IIT) Madras, Chennai, Tamil Nadu, India","institution_ids":["https://openalex.org/I24676775"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5011489319","display_name":"Karthik Raman","orcid":"https://orcid.org/0000-0002-9311-7093"},"institutions":[{"id":"https://openalex.org/I24676775","display_name":"Indian Institute of Technology Madras","ror":"https://ror.org/03v0r5n49","country_code":"IN","type":"facility","lineage":["https://openalex.org/I24676775"]}],"countries":["IN"],"is_corresponding":true,"raw_author_name":"Karthik Raman","raw_affiliation_strings":["Department of Biotechnology, Bhupat and Jyoti Mehta School of Biosciences, Indian Institute of Technology (IIT) Madras, Chennai, Tamil Nadu, India","Initiative for Biological Systems Engineering (IBSE), Interdisciplinary Laboratory for Data Sciences, Indian Institute of Technology (IIT) Madras, Chennai, Tamil Nadu, India"],"affiliations":[{"raw_affiliation_string":"Department of Biotechnology, Bhupat and Jyoti Mehta School of Biosciences, Indian Institute of Technology (IIT) Madras, Chennai, Tamil Nadu, India","institution_ids":["https://openalex.org/I24676775"]},{"raw_affiliation_string":"Initiative for Biological Systems Engineering (IBSE), Interdisciplinary Laboratory for Data Sciences, Indian Institute of Technology (IIT) Madras, Chennai, Tamil Nadu, India","institution_ids":["https://openalex.org/I24676775"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5011489319","https://openalex.org/A5054697900"],"corresponding_institution_ids":["https://openalex.org/I24676775"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":0.6298,"has_fulltext":true,"cited_by_count":18,"citation_normalized_percentile":{"value":0.68452468,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"33","issue":"24","first_page":"3955","last_page":"3963"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11882","display_name":"Plant biochemistry and biosynthesis","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11882","display_name":"Plant biochemistry and biosynthesis","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10252","display_name":"Microbial Natural Products and Biosynthesis","score":0.9970999956130981,"subfield":{"id":"https://openalex.org/subfields/2736","display_name":"Pharmacology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6687336564064026},{"id":"https://openalex.org/keywords/kegg","display_name":"KEGG","score":0.4996955394744873},{"id":"https://openalex.org/keywords/ranking","display_name":"Ranking (information retrieval)","score":0.48799222707748413},{"id":"https://openalex.org/keywords/retrosynthetic-analysis","display_name":"Retrosynthetic analysis","score":0.41828057169914246},{"id":"https://openalex.org/keywords/cheminformatics","display_name":"Cheminformatics","score":0.41187670826911926},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.41073089838027954},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.40421435236930847},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.3521924316883087},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3279787302017212},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3236205577850342},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.29526227712631226},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.14880433678627014},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.14371395111083984},{"id":"https://openalex.org/keywords/computational-chemistry","display_name":"Computational chemistry","score":0.1262151598930359}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6687336564064026},{"id":"https://openalex.org/C152724338","wikidata":"https://www.wikidata.org/wiki/Q909442","display_name":"KEGG","level":5,"score":0.4996955394744873},{"id":"https://openalex.org/C189430467","wikidata":"https://www.wikidata.org/wiki/Q7293293","display_name":"Ranking (information retrieval)","level":2,"score":0.48799222707748413},{"id":"https://openalex.org/C42437451","wikidata":"https://www.wikidata.org/wiki/Q902227","display_name":"Retrosynthetic analysis","level":3,"score":0.41828057169914246},{"id":"https://openalex.org/C68762167","wikidata":"https://www.wikidata.org/wiki/Q910164","display_name":"Cheminformatics","level":2,"score":0.41187670826911926},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.41073089838027954},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.40421435236930847},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.3521924316883087},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3279787302017212},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3236205577850342},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.29526227712631226},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.14880433678627014},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.14371395111083984},{"id":"https://openalex.org/C147597530","wikidata":"https://www.wikidata.org/wiki/Q369472","display_name":"Computational chemistry","level":1,"score":0.1262151598930359},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.0},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C35753019","wikidata":"https://www.wikidata.org/wiki/Q644785","display_name":"Total synthesis","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015394","descriptor_name":"Molecular Structure","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015394","descriptor_name":"Molecular Structure","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015394","descriptor_name":"Molecular Structure","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D060847","descriptor_name":"Metabolic Engineering","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D060847","descriptor_name":"Metabolic Engineering","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D060847","descriptor_name":"Metabolic Engineering","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btx481","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btx481","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/33/24/3955/25168568/btx481.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:28961716","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/28961716","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btx481","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btx481","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/33/24/3955/25168568/btx481.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G5219794597","display_name":null,"funder_award_id":"CSE/14-15/5643/NFSC/SAYN","funder_id":"https://openalex.org/F4320322211","funder_display_name":"Indian Institute of Technology Madras"}],"funders":[{"id":"https://openalex.org/F4320322211","display_name":"Indian Institute of Technology Madras","ror":"https://ror.org/03v0r5n49"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2950095536.pdf","grobid_xml":"https://content.openalex.org/works/W2950095536.grobid-xml"},"referenced_works_count":42,"referenced_works":["https://openalex.org/W433788815","https://openalex.org/W1577825084","https://openalex.org/W1964232618","https://openalex.org/W1992043510","https://openalex.org/W1996830618","https://openalex.org/W1997974358","https://openalex.org/W1997996256","https://openalex.org/W1999938932","https://openalex.org/W2016215782","https://openalex.org/W2024028488","https://openalex.org/W2032338144","https://openalex.org/W2040010296","https://openalex.org/W2066412916","https://openalex.org/W2067156145","https://openalex.org/W2097032746","https://openalex.org/W2104619491","https://openalex.org/W2108590631","https://openalex.org/W2109449871","https://openalex.org/W2110256992","https://openalex.org/W2112101310","https://openalex.org/W2112933939","https://openalex.org/W2114013202","https://openalex.org/W2122410182","https://openalex.org/W2128601422","https://openalex.org/W2129311744","https://openalex.org/W2129860041","https://openalex.org/W2131504364","https://openalex.org/W2137650465","https://openalex.org/W2143000571","https://openalex.org/W2149202606","https://openalex.org/W2152776677","https://openalex.org/W2163898101","https://openalex.org/W2164538999","https://openalex.org/W2165373392","https://openalex.org/W2178117785","https://openalex.org/W2344676116","https://openalex.org/W2466795701","https://openalex.org/W2485621561","https://openalex.org/W2580575429","https://openalex.org/W4214712303","https://openalex.org/W4237293127","https://openalex.org/W4244606975"],"related_works":["https://openalex.org/W1573015311","https://openalex.org/W1570419641","https://openalex.org/W2802890179","https://openalex.org/W2040103915","https://openalex.org/W2792880831","https://openalex.org/W4389523661","https://openalex.org/W4389599499","https://openalex.org/W3003333974","https://openalex.org/W3120165387","https://openalex.org/W4220747243"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":2}],"updated_date":"2025-11-23T05:10:03.516525","created_date":"2025-10-10T00:00:00"}
