{"id":"https://openalex.org/W2606513810","doi":"https://doi.org/10.1093/bioinformatics/btx210","title":"miRCat2: accurate prediction of plant and animal microRNAs from next-generation sequencing datasets","display_name":"miRCat2: accurate prediction of plant and animal microRNAs from next-generation sequencing datasets","publication_year":2017,"publication_date":"2017-04-10","ids":{"openalex":"https://openalex.org/W2606513810","doi":"https://doi.org/10.1093/bioinformatics/btx210","mag":"2606513810","pmid":"https://pubmed.ncbi.nlm.nih.gov/28407097"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btx210","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btx210","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/33/16/2446/25163491/btx210.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/33/16/2446/25163491/btx210.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5004222639","display_name":"Claudia Paicu","orcid":null},"institutions":[{"id":"https://openalex.org/I4210100714","display_name":"Earlham Institute","ror":"https://ror.org/018cxtf62","country_code":"GB","type":"facility","lineage":["https://openalex.org/I2799693246","https://openalex.org/I4210087105","https://openalex.org/I4210100714"]},{"id":"https://openalex.org/I1118541","display_name":"University of East Anglia","ror":"https://ror.org/026k5mg93","country_code":"GB","type":"education","lineage":["https://openalex.org/I1118541"]},{"id":"https://openalex.org/I2799300731","display_name":"Norwich Research Park","ror":"https://ror.org/0062dz060","country_code":"GB","type":"archive","lineage":["https://openalex.org/I2799300731"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Claudia Paicu","raw_affiliation_strings":["School of Computing Sciences, University of East Anglia, Norwich Research Park, Norwich, UK","The Earlham Institute, Norwich Research Park, Norwich, UK"],"affiliations":[{"raw_affiliation_string":"School of Computing Sciences, University of East Anglia, Norwich Research Park, Norwich, UK","institution_ids":["https://openalex.org/I1118541","https://openalex.org/I2799300731"]},{"raw_affiliation_string":"The Earlham Institute, Norwich Research Park, Norwich, UK","institution_ids":["https://openalex.org/I4210100714","https://openalex.org/I2799300731"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053059503","display_name":"Irina Mohorianu","orcid":"https://orcid.org/0000-0003-4863-761X"},"institutions":[{"id":"https://openalex.org/I2799300731","display_name":"Norwich Research Park","ror":"https://ror.org/0062dz060","country_code":"GB","type":"archive","lineage":["https://openalex.org/I2799300731"]},{"id":"https://openalex.org/I1118541","display_name":"University of East Anglia","ror":"https://ror.org/026k5mg93","country_code":"GB","type":"education","lineage":["https://openalex.org/I1118541"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Irina Mohorianu","raw_affiliation_strings":["School of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich, UK","School of Computing Sciences, University of East Anglia, Norwich Research Park, Norwich, UK"],"affiliations":[{"raw_affiliation_string":"School of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich, UK","institution_ids":["https://openalex.org/I1118541","https://openalex.org/I2799300731"]},{"raw_affiliation_string":"School of Computing Sciences, University of East Anglia, Norwich Research Park, Norwich, UK","institution_ids":["https://openalex.org/I1118541","https://openalex.org/I2799300731"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084297488","display_name":"M. B. Stocks","orcid":"https://orcid.org/0000-0003-3818-3626"},"institutions":[{"id":"https://openalex.org/I1118541","display_name":"University of East Anglia","ror":"https://ror.org/026k5mg93","country_code":"GB","type":"education","lineage":["https://openalex.org/I1118541"]},{"id":"https://openalex.org/I2799300731","display_name":"Norwich Research Park","ror":"https://ror.org/0062dz060","country_code":"GB","type":"archive","lineage":["https://openalex.org/I2799300731"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Matthew Stocks","raw_affiliation_strings":["School of Computing Sciences, University of East Anglia, Norwich Research Park, Norwich, UK"],"affiliations":[{"raw_affiliation_string":"School of Computing Sciences, University of East Anglia, Norwich Research Park, Norwich, UK","institution_ids":["https://openalex.org/I1118541","https://openalex.org/I2799300731"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008058822","display_name":"Ping Xu","orcid":"https://orcid.org/0000-0001-9031-9004"},"institutions":[{"id":"https://openalex.org/I2799300731","display_name":"Norwich Research Park","ror":"https://ror.org/0062dz060","country_code":"GB","type":"archive","lineage":["https://openalex.org/I2799300731"]},{"id":"https://openalex.org/I1118541","display_name":"University of East Anglia","ror":"https://ror.org/026k5mg93","country_code":"GB","type":"education","lineage":["https://openalex.org/I1118541"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Ping Xu","raw_affiliation_strings":["School of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich, UK"],"affiliations":[{"raw_affiliation_string":"School of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich, UK","institution_ids":["https://openalex.org/I1118541","https://openalex.org/I2799300731"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054684933","display_name":"Aurore Coince","orcid":null},"institutions":[{"id":"https://openalex.org/I2799300731","display_name":"Norwich Research Park","ror":"https://ror.org/0062dz060","country_code":"GB","type":"archive","lineage":["https://openalex.org/I2799300731"]},{"id":"https://openalex.org/I1118541","display_name":"University of East Anglia","ror":"https://ror.org/026k5mg93","country_code":"GB","type":"education","lineage":["https://openalex.org/I1118541"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Aurore Coince","raw_affiliation_strings":["School of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich, UK"],"affiliations":[{"raw_affiliation_string":"School of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich, UK","institution_ids":["https://openalex.org/I1118541","https://openalex.org/I2799300731"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057528929","display_name":"Martina Billmeier","orcid":null},"institutions":[{"id":"https://openalex.org/I2799300731","display_name":"Norwich Research Park","ror":"https://ror.org/0062dz060","country_code":"GB","type":"archive","lineage":["https://openalex.org/I2799300731"]},{"id":"https://openalex.org/I1118541","display_name":"University of East Anglia","ror":"https://ror.org/026k5mg93","country_code":"GB","type":"education","lineage":["https://openalex.org/I1118541"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Martina Billmeier","raw_affiliation_strings":["School of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich, UK"],"affiliations":[{"raw_affiliation_string":"School of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich, UK","institution_ids":["https://openalex.org/I1118541","https://openalex.org/I2799300731"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008262717","display_name":"Tam\u00e1s Dalmay","orcid":"https://orcid.org/0000-0003-1492-5429"},"institutions":[{"id":"https://openalex.org/I1118541","display_name":"University of East Anglia","ror":"https://ror.org/026k5mg93","country_code":"GB","type":"education","lineage":["https://openalex.org/I1118541"]},{"id":"https://openalex.org/I2799300731","display_name":"Norwich Research Park","ror":"https://ror.org/0062dz060","country_code":"GB","type":"archive","lineage":["https://openalex.org/I2799300731"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Tamas Dalmay","raw_affiliation_strings":["School of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich, UK"],"affiliations":[{"raw_affiliation_string":"School of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich, UK","institution_ids":["https://openalex.org/I1118541","https://openalex.org/I2799300731"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042929579","display_name":"Vincent Moulton","orcid":"https://orcid.org/0000-0001-9371-6435"},"institutions":[{"id":"https://openalex.org/I2799300731","display_name":"Norwich Research Park","ror":"https://ror.org/0062dz060","country_code":"GB","type":"archive","lineage":["https://openalex.org/I2799300731"]},{"id":"https://openalex.org/I1118541","display_name":"University of East Anglia","ror":"https://ror.org/026k5mg93","country_code":"GB","type":"education","lineage":["https://openalex.org/I1118541"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Vincent Moulton","raw_affiliation_strings":["School of Computing Sciences, University of East Anglia, Norwich Research Park, Norwich, UK"],"affiliations":[{"raw_affiliation_string":"School of Computing Sciences, University of East Anglia, Norwich Research Park, Norwich, UK","institution_ids":["https://openalex.org/I1118541","https://openalex.org/I2799300731"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5078089858","display_name":"Simon Moxon","orcid":"https://orcid.org/0000-0003-4644-1816"},"institutions":[{"id":"https://openalex.org/I1118541","display_name":"University of East Anglia","ror":"https://ror.org/026k5mg93","country_code":"GB","type":"education","lineage":["https://openalex.org/I1118541"]},{"id":"https://openalex.org/I2799300731","display_name":"Norwich Research Park","ror":"https://ror.org/0062dz060","country_code":"GB","type":"archive","lineage":["https://openalex.org/I2799300731"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Simon Moxon","raw_affiliation_strings":["School of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich, UK"],"affiliations":[{"raw_affiliation_string":"School of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich, UK","institution_ids":["https://openalex.org/I1118541","https://openalex.org/I2799300731"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5042929579","https://openalex.org/A5078089858"],"corresponding_institution_ids":["https://openalex.org/I1118541","https://openalex.org/I2799300731"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":2601,"currency":"EUR","value_usd":2805},"fwci":3.3847,"has_fulltext":true,"cited_by_count":66,"citation_normalized_percentile":{"value":0.93480461,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":"33","issue":"16","first_page":"2446","last_page":"2454"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/workbench","display_name":"Workbench","score":0.7907209992408752},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6069307923316956},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5662553310394287},{"id":"https://openalex.org/keywords/microrna","display_name":"microRNA","score":0.5326406955718994},{"id":"https://openalex.org/keywords/dna-sequencing","display_name":"DNA sequencing","score":0.519786536693573},{"id":"https://openalex.org/keywords/small-rna","display_name":"Small RNA","score":0.49296998977661133},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.41676396131515503},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3516477942466736},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.34821125864982605},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.3214026093482971},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.30565035343170166},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.26670852303504944}],"concepts":[{"id":"https://openalex.org/C2779145975","wikidata":"https://www.wikidata.org/wiki/Q347690","display_name":"Workbench","level":3,"score":0.7907209992408752},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6069307923316956},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5662553310394287},{"id":"https://openalex.org/C145059251","wikidata":"https://www.wikidata.org/wiki/Q310899","display_name":"microRNA","level":3,"score":0.5326406955718994},{"id":"https://openalex.org/C51679486","wikidata":"https://www.wikidata.org/wiki/Q380546","display_name":"DNA sequencing","level":3,"score":0.519786536693573},{"id":"https://openalex.org/C2779341050","wikidata":"https://www.wikidata.org/wiki/Q24287527","display_name":"Small RNA","level":4,"score":0.49296998977661133},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.41676396131515503},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3516477942466736},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.34821125864982605},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.3214026093482971},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.30565035343170166},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.26670852303504944}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010944","descriptor_name":"Plants","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010944","descriptor_name":"Plants","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010944","descriptor_name":"Plants","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010944","descriptor_name":"Plants","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010944","descriptor_name":"Plants","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D010944","descriptor_name":"Plants","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D010944","descriptor_name":"Plants","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D010944","descriptor_name":"Plants","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019277","descriptor_name":"Entropy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019277","descriptor_name":"Entropy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019277","descriptor_name":"Entropy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019277","descriptor_name":"Entropy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D056426","descriptor_name":"Genetic Loci","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D056426","descriptor_name":"Genetic Loci","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D056426","descriptor_name":"Genetic Loci","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D056426","descriptor_name":"Genetic Loci","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btx210","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btx210","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/33/16/2446/25163491/btx210.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:28407097","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/28407097","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:ueaeprints.uea.ac.uk:63193","is_oa":true,"landing_page_url":null,"pdf_url":"https://ueaeprints.uea.ac.uk/id/eprint/63193/1/btx210.pdf","source":{"id":"https://openalex.org/S4306400384","display_name":"UEA Digital Repository (University of East Anglia)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1118541","host_organization_name":"University of East Anglia","host_organization_lineage":["https://openalex.org/I1118541"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"PeerReviewed"},{"id":"pmh:oai:pubmedcentral.nih.gov:5870699","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5870699","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btx210","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btx210","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/33/16/2446/25163491/btx210.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2009616738","display_name":null,"funder_award_id":"BB/L021269/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G5927958512","display_name":"The UEA Small RNA Workbench: New and improved tools for high throughput small RNA analysis","funder_award_id":"BB/L021269/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"}],"funders":[{"id":"https://openalex.org/F4320332167","display_name":"Directorate for Biological Sciences","ror":"https://ror.org/001xhss06"},{"id":"https://openalex.org/F4320334629","display_name":"Biotechnology and Biological Sciences Research Council","ror":"https://ror.org/00cwqg982"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2606513810.pdf","grobid_xml":"https://content.openalex.org/works/W2606513810.grobid-xml"},"referenced_works_count":101,"referenced_works":["https://openalex.org/W144423133","https://openalex.org/W1496367743","https://openalex.org/W1600420628","https://openalex.org/W1642967260","https://openalex.org/W1648301895","https://openalex.org/W1885622104","https://openalex.org/W1963743411","https://openalex.org/W1965555277","https://openalex.org/W1976612131","https://openalex.org/W1978379303","https://openalex.org/W1980269624","https://openalex.org/W1982213293","https://openalex.org/W1985974546","https://openalex.org/W1989015932","https://openalex.org/W2006247279","https://openalex.org/W2014064723","https://openalex.org/W2015969705","https://openalex.org/W2017020642","https://openalex.org/W2021735982","https://openalex.org/W2026570758","https://openalex.org/W2029966770","https://openalex.org/W2033211860","https://openalex.org/W2035886282","https://openalex.org/W2036656644","https://openalex.org/W2044131517","https://openalex.org/W2044532338","https://openalex.org/W2045402423","https://openalex.org/W2046379971","https://openalex.org/W2047967134","https://openalex.org/W2052785172","https://openalex.org/W2054109341","https://openalex.org/W2061513073","https://openalex.org/W2061909101","https://openalex.org/W2069041912","https://openalex.org/W2071596792","https://openalex.org/W2071656143","https://openalex.org/W2077327925","https://openalex.org/W2078849828","https://openalex.org/W2086561953","https://openalex.org/W2088390270","https://openalex.org/W2094011847","https://openalex.org/W2096823720","https://openalex.org/W2098207011","https://openalex.org/W2098318517","https://openalex.org/W2099517697","https://openalex.org/W2100555999","https://openalex.org/W2105821863","https://openalex.org/W2106929712","https://openalex.org/W2109525082","https://openalex.org/W2115028144","https://openalex.org/W2116041602","https://openalex.org/W2116147330","https://openalex.org/W2117991391","https://openalex.org/W2118258530","https://openalex.org/W2121673931","https://openalex.org/W2123364539","https://openalex.org/W2126214547","https://openalex.org/W2128674168","https://openalex.org/W2130305733","https://openalex.org/W2130386995","https://openalex.org/W2132922290","https://openalex.org/W2135645594","https://openalex.org/W2135836598","https://openalex.org/W2136148915","https://openalex.org/W2136991248","https://openalex.org/W2137988707","https://openalex.org/W2140116051","https://openalex.org/W2144541997","https://openalex.org/W2145251517","https://openalex.org/W2146331115","https://openalex.org/W2147495091","https://openalex.org/W2149291473","https://openalex.org/W2152269273","https://openalex.org/W2152327613","https://openalex.org/W2153327762","https://openalex.org/W2154431984","https://openalex.org/W2154841861","https://openalex.org/W2155649150","https://openalex.org/W2156852055","https://openalex.org/W2159209696","https://openalex.org/W2159444732","https://openalex.org/W2162674813","https://openalex.org/W2165804743","https://openalex.org/W2165909549","https://openalex.org/W2167557255","https://openalex.org/W2168230240","https://openalex.org/W2168508656","https://openalex.org/W2169416219","https://openalex.org/W2170323423","https://openalex.org/W2184343450","https://openalex.org/W2190523698","https://openalex.org/W2243347490","https://openalex.org/W2284515829","https://openalex.org/W2299595562","https://openalex.org/W2343686463","https://openalex.org/W4212941976","https://openalex.org/W4253157748","https://openalex.org/W6635707905","https://openalex.org/W6657933629","https://openalex.org/W6666153072","https://openalex.org/W6682689792"],"related_works":["https://openalex.org/W2388509490","https://openalex.org/W2109648960","https://openalex.org/W2166015079","https://openalex.org/W2050384624","https://openalex.org/W2776888796","https://openalex.org/W2323693199","https://openalex.org/W2795873045","https://openalex.org/W3009983268","https://openalex.org/W2057742104","https://openalex.org/W4283692078"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":8},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":7},{"year":2020,"cited_by_count":11},{"year":2019,"cited_by_count":12},{"year":2018,"cited_by_count":12},{"year":2017,"cited_by_count":3}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
