{"id":"https://openalex.org/W2604529300","doi":"https://doi.org/10.1093/bioinformatics/btx207","title":"Machine learning in computational biology to accelerate high-throughput protein expression","display_name":"Machine learning in computational biology to accelerate high-throughput protein expression","publication_year":2017,"publication_date":"2017-04-05","ids":{"openalex":"https://openalex.org/W2604529300","doi":"https://doi.org/10.1093/bioinformatics/btx207","mag":"2604529300","pmid":"https://pubmed.ncbi.nlm.nih.gov/28398465"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btx207","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btx207","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/33/16/2487/25163554/btx207.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/33/16/2487/25163554/btx207.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5047222181","display_name":"Anand V. Sastry","orcid":"https://orcid.org/0000-0002-8293-3909"},"institutions":[{"id":"https://openalex.org/I36258959","display_name":"University of California, San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Anand Sastry","raw_affiliation_strings":["Department of Bioengineering, University of California, San Diego, CA, USA"],"affiliations":[{"raw_affiliation_string":"Department of Bioengineering, University of California, San Diego, CA, USA","institution_ids":["https://openalex.org/I36258959"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088968927","display_name":"Jonathan M. Monk","orcid":"https://orcid.org/0000-0002-3895-8949"},"institutions":[{"id":"https://openalex.org/I36258959","display_name":"University of California, San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jonathan Monk","raw_affiliation_strings":["Department of Bioengineering, University of California, San Diego, CA, USA"],"affiliations":[{"raw_affiliation_string":"Department of Bioengineering, University of California, San Diego, CA, USA","institution_ids":["https://openalex.org/I36258959"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056614607","display_name":"Hanna Tegel","orcid":"https://orcid.org/0000-0002-7067-9173"},"institutions":[{"id":"https://openalex.org/I86987016","display_name":"KTH Royal Institute of Technology","ror":"https://ror.org/026vcq606","country_code":"SE","type":"education","lineage":["https://openalex.org/I86987016"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Hanna Tegel","raw_affiliation_strings":["KTH - Royal Institute of Technology, Department of Proteomics and Nanobiotechnology, Stockholm, Sweden"],"affiliations":[{"raw_affiliation_string":"KTH - Royal Institute of Technology, Department of Proteomics and Nanobiotechnology, Stockholm, Sweden","institution_ids":["https://openalex.org/I86987016"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060241561","display_name":"Mathias Uhl\u00e9n","orcid":"https://orcid.org/0000-0002-4858-8056"},"institutions":[{"id":"https://openalex.org/I96673099","display_name":"Technical University of Denmark","ror":"https://ror.org/04qtj9h94","country_code":"DK","type":"education","lineage":["https://openalex.org/I96673099"]},{"id":"https://openalex.org/I2801134892","display_name":"Novo Nordisk Foundation","ror":"https://ror.org/04txyc737","country_code":"DK","type":"facility","lineage":["https://openalex.org/I2801134892"]},{"id":"https://openalex.org/I86987016","display_name":"KTH Royal Institute of Technology","ror":"https://ror.org/026vcq606","country_code":"SE","type":"education","lineage":["https://openalex.org/I86987016"]}],"countries":["DK","SE"],"is_corresponding":false,"raw_author_name":"Mathias Uhlen","raw_affiliation_strings":["KTH - Royal Institute of Technology, Department of Proteomics and Nanobiotechnology, Stockholm, Sweden","The Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby, Denmark"],"affiliations":[{"raw_affiliation_string":"KTH - Royal Institute of Technology, Department of Proteomics and Nanobiotechnology, Stockholm, Sweden","institution_ids":["https://openalex.org/I86987016"]},{"raw_affiliation_string":"The Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby, Denmark","institution_ids":["https://openalex.org/I2801134892","https://openalex.org/I96673099"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051097609","display_name":"Bernhard \u00d8. Palsson","orcid":"https://orcid.org/0000-0003-2357-6785"},"institutions":[{"id":"https://openalex.org/I2801134892","display_name":"Novo Nordisk Foundation","ror":"https://ror.org/04txyc737","country_code":"DK","type":"facility","lineage":["https://openalex.org/I2801134892"]},{"id":"https://openalex.org/I96673099","display_name":"Technical University of Denmark","ror":"https://ror.org/04qtj9h94","country_code":"DK","type":"education","lineage":["https://openalex.org/I96673099"]},{"id":"https://openalex.org/I36258959","display_name":"University of California, San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["DK","US"],"is_corresponding":false,"raw_author_name":"Bernhard O Palsson","raw_affiliation_strings":["Department of Bioengineering, University of California, San Diego, CA, USA","The Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby, Denmark"],"affiliations":[{"raw_affiliation_string":"Department of Bioengineering, University of California, San Diego, CA, USA","institution_ids":["https://openalex.org/I36258959"]},{"raw_affiliation_string":"The Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby, Denmark","institution_ids":["https://openalex.org/I2801134892","https://openalex.org/I96673099"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005928603","display_name":"Johan Rockberg","orcid":"https://orcid.org/0000-0002-9977-5724"},"institutions":[{"id":"https://openalex.org/I86987016","display_name":"KTH Royal Institute of Technology","ror":"https://ror.org/026vcq606","country_code":"SE","type":"education","lineage":["https://openalex.org/I86987016"]}],"countries":["SE"],"is_corresponding":true,"raw_author_name":"Johan Rockberg","raw_affiliation_strings":["KTH - Royal Institute of Technology, Department of Proteomics and Nanobiotechnology, Stockholm, Sweden"],"affiliations":[{"raw_affiliation_string":"KTH - Royal Institute of Technology, Department of Proteomics and Nanobiotechnology, Stockholm, Sweden","institution_ids":["https://openalex.org/I86987016"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5002596498","display_name":"Elizabeth Brunk","orcid":"https://orcid.org/0000-0001-8578-8658"},"institutions":[{"id":"https://openalex.org/I36258959","display_name":"University of California, San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]},{"id":"https://openalex.org/I96673099","display_name":"Technical University of Denmark","ror":"https://ror.org/04qtj9h94","country_code":"DK","type":"education","lineage":["https://openalex.org/I96673099"]},{"id":"https://openalex.org/I2801134892","display_name":"Novo Nordisk Foundation","ror":"https://ror.org/04txyc737","country_code":"DK","type":"facility","lineage":["https://openalex.org/I2801134892"]}],"countries":["DK","US"],"is_corresponding":true,"raw_author_name":"Elizabeth Brunk","raw_affiliation_strings":["Department of Bioengineering, University of California, San Diego, CA, USA","The Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby, Denmark"],"affiliations":[{"raw_affiliation_string":"Department of Bioengineering, University of California, San Diego, CA, USA","institution_ids":["https://openalex.org/I36258959"]},{"raw_affiliation_string":"The Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby, Denmark","institution_ids":["https://openalex.org/I2801134892","https://openalex.org/I96673099"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5002596498","https://openalex.org/A5005928603"],"corresponding_institution_ids":["https://openalex.org/I2801134892","https://openalex.org/I36258959","https://openalex.org/I86987016","https://openalex.org/I96673099"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":0.898,"has_fulltext":false,"cited_by_count":15,"citation_normalized_percentile":{"value":0.73065694,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"33","issue":"16","first_page":"2487","last_page":"2495"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.9947999715805054,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9944000244140625,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/throughput","display_name":"Throughput","score":0.6609107255935669},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6497342586517334},{"id":"https://openalex.org/keywords/protein-expression","display_name":"Protein expression","score":0.5322359204292297},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.47200441360473633},{"id":"https://openalex.org/keywords/expression","display_name":"Expression (computer science)","score":0.42951419949531555},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.41612452268600464},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4140029549598694},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.26312392950057983},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.1303136944770813},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.12520423531532288},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.09824889898300171},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.09143292903900146}],"concepts":[{"id":"https://openalex.org/C157764524","wikidata":"https://www.wikidata.org/wiki/Q1383412","display_name":"Throughput","level":3,"score":0.6609107255935669},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6497342586517334},{"id":"https://openalex.org/C6856738","wikidata":"https://www.wikidata.org/wiki/Q331672","display_name":"Protein expression","level":3,"score":0.5322359204292297},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.47200441360473633},{"id":"https://openalex.org/C90559484","wikidata":"https://www.wikidata.org/wiki/Q778379","display_name":"Expression (computer science)","level":2,"score":0.42951419949531555},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.41612452268600464},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4140029549598694},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.26312392950057983},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.1303136944770813},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.12520423531532288},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.09824889898300171},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.09143292903900146},{"id":"https://openalex.org/C555944384","wikidata":"https://www.wikidata.org/wiki/Q249","display_name":"Wireless","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009928","descriptor_name":"Organ Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009928","descriptor_name":"Organ Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009928","descriptor_name":"Organ Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012995","descriptor_name":"Solubility","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012995","descriptor_name":"Solubility","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012995","descriptor_name":"Solubility","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false}],"locations_count":6,"locations":[{"id":"doi:10.1093/bioinformatics/btx207","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btx207","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/33/16/2487/25163554/btx207.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:28398465","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/28398465","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:escholarship.org:ark:/13030/qt9jn178c6","is_oa":false,"landing_page_url":"https://escholarship.org/uc/item/9jn178c6","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics, vol 33, iss 16","raw_type":"article"},{"id":"pmh:oai:europepmc.org:5037304","is_oa":false,"landing_page_url":"http://europepmc.org/pmc/articles/PMC5870730","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:5870730","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5870730","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:pure.atira.dk:publications/a2f55bef-a877-444a-96b1-6dd3451c16e0","is_oa":false,"landing_page_url":"https://orbit.dtu.dk/en/publications/a2f55bef-a877-444a-96b1-6dd3451c16e0","pdf_url":null,"source":{"id":"https://openalex.org/S4306400705","display_name":"Technical University of Denmark, DTU Orbit (Technical University of Denmark, DTU)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I96673099","host_organization_name":"Technical University of Denmark","host_organization_lineage":["https://openalex.org/I96673099"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Sastry , A , Monk , J M , Tegel , H , Uhl\u00e9n , M , Palsson , B , Rockberg , J &amp; Brunk , E 2017 , ' Machine learning in computational biology to accelerate high-throughput protein expression ' , Bioinformatics , vol. 33 , no. 16 , pp. 2487-2495 . https://doi.org/10.1093/bioinformatics/btx207","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btx207","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btx207","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/33/16/2487/25163554/btx207.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.49000000953674316,"display_name":"Industry, innovation and infrastructure","id":"https://metadata.un.org/sdg/9"}],"awards":[{"id":"https://openalex.org/G2675982406","display_name":null,"funder_award_id":"R01 GM057089","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2604529300.pdf","grobid_xml":"https://content.openalex.org/works/W2604529300.grobid-xml"},"referenced_works_count":54,"referenced_works":["https://openalex.org/W1488092868","https://openalex.org/W1496851670","https://openalex.org/W1548911371","https://openalex.org/W1554605395","https://openalex.org/W1588724272","https://openalex.org/W1591986713","https://openalex.org/W1965887320","https://openalex.org/W1972516851","https://openalex.org/W1981758349","https://openalex.org/W2004674004","https://openalex.org/W2006782375","https://openalex.org/W2008633785","https://openalex.org/W2009973427","https://openalex.org/W2012034410","https://openalex.org/W2014776147","https://openalex.org/W2015185330","https://openalex.org/W2018590530","https://openalex.org/W2035475950","https://openalex.org/W2036649644","https://openalex.org/W2042460590","https://openalex.org/W2042700625","https://openalex.org/W2051242197","https://openalex.org/W2061659241","https://openalex.org/W2063779182","https://openalex.org/W2074490119","https://openalex.org/W2092035637","https://openalex.org/W2092391603","https://openalex.org/W2094148055","https://openalex.org/W2096495474","https://openalex.org/W2107804881","https://openalex.org/W2114630876","https://openalex.org/W2114850508","https://openalex.org/W2116541947","https://openalex.org/W2116818641","https://openalex.org/W2119246926","https://openalex.org/W2119336718","https://openalex.org/W2120659498","https://openalex.org/W2133458779","https://openalex.org/W2136141445","https://openalex.org/W2137116550","https://openalex.org/W2137450588","https://openalex.org/W2138820253","https://openalex.org/W2144587714","https://openalex.org/W2153349010","https://openalex.org/W2156678798","https://openalex.org/W2162980545","https://openalex.org/W2164511624","https://openalex.org/W2172028877","https://openalex.org/W2233287223","https://openalex.org/W2259283565","https://openalex.org/W2400250419","https://openalex.org/W2495238549","https://openalex.org/W2502949459","https://openalex.org/W2541638185"],"related_works":["https://openalex.org/W2136583354","https://openalex.org/W2111238207","https://openalex.org/W2760721665","https://openalex.org/W2107954672","https://openalex.org/W330130819","https://openalex.org/W2288610023","https://openalex.org/W2392243736","https://openalex.org/W86652014","https://openalex.org/W2112044895","https://openalex.org/W4388280821"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":2},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":5},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":2}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
