{"id":"https://openalex.org/W2597856736","doi":"https://doi.org/10.1093/bioinformatics/btx182","title":"rMSI: an R package for MS imaging data handling and visualization","display_name":"rMSI: an R package for MS imaging data handling and visualization","publication_year":2017,"publication_date":"2017-03-28","ids":{"openalex":"https://openalex.org/W2597856736","doi":"https://doi.org/10.1093/bioinformatics/btx182","mag":"2597856736","pmid":"https://pubmed.ncbi.nlm.nih.gov/28369250"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btx182","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btx182","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/33/15/2427/25157726/btx182.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/33/15/2427/25157726/btx182.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5062192621","display_name":"Pere R\u00e0fols","orcid":"https://orcid.org/0000-0002-9240-4058"},"institutions":[{"id":"https://openalex.org/I4210092133","display_name":"Centro de Investigaci\u00f3n Biom\u00e9dica en Red Diabetes y Enfermedades Metab\u00f3licas Asociadas","ror":"https://ror.org/00dwgct76","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2801357902","https://openalex.org/I4210092133","https://openalex.org/I4387152914"]},{"id":"https://openalex.org/I4210101772","display_name":"Institut de Recerca Biom\u00e8dica Catalunya Sud","ror":"https://ror.org/01av3a615","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210101772","https://openalex.org/I4387153040"]},{"id":"https://openalex.org/I55952717","display_name":"Universitat Rovira i Virgili","ror":"https://ror.org/00g5sqv46","country_code":"ES","type":"education","lineage":["https://openalex.org/I55952717"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Pere R\u00e0fols","raw_affiliation_strings":["Department of Electronic Engineering, Rovira i Virgili University, IISPV, Tarragona, Spain","Spanish Biomedical Research Centre in Diabetes and Associated Metabolic Disorders (CIBERDEM), Madrid, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electronic Engineering, Rovira i Virgili University, IISPV, Tarragona, Spain","institution_ids":["https://openalex.org/I4210101772","https://openalex.org/I55952717"]},{"raw_affiliation_string":"Spanish Biomedical Research Centre in Diabetes and Associated Metabolic Disorders (CIBERDEM), Madrid, Spain","institution_ids":["https://openalex.org/I4210092133"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044218143","display_name":"S\u00f2nia Torres","orcid":"https://orcid.org/0000-0001-8881-0793"},"institutions":[{"id":"https://openalex.org/I4210092133","display_name":"Centro de Investigaci\u00f3n Biom\u00e9dica en Red Diabetes y Enfermedades Metab\u00f3licas Asociadas","ror":"https://ror.org/00dwgct76","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2801357902","https://openalex.org/I4210092133","https://openalex.org/I4387152914"]},{"id":"https://openalex.org/I4210101772","display_name":"Institut de Recerca Biom\u00e8dica Catalunya Sud","ror":"https://ror.org/01av3a615","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210101772","https://openalex.org/I4387153040"]},{"id":"https://openalex.org/I55952717","display_name":"Universitat Rovira i Virgili","ror":"https://ror.org/00g5sqv46","country_code":"ES","type":"education","lineage":["https://openalex.org/I55952717"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"S\u00f2nia Torres","raw_affiliation_strings":["Department of Electronic Engineering, Rovira i Virgili University, IISPV, Tarragona, Spain","Spanish Biomedical Research Centre in Diabetes and Associated Metabolic Disorders (CIBERDEM), Madrid, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electronic Engineering, Rovira i Virgili University, IISPV, Tarragona, Spain","institution_ids":["https://openalex.org/I4210101772","https://openalex.org/I55952717"]},{"raw_affiliation_string":"Spanish Biomedical Research Centre in Diabetes and Associated Metabolic Disorders (CIBERDEM), Madrid, Spain","institution_ids":["https://openalex.org/I4210092133"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063829923","display_name":"Noelia Ram\u00edrez","orcid":"https://orcid.org/0000-0002-9251-0790"},"institutions":[{"id":"https://openalex.org/I4210092133","display_name":"Centro de Investigaci\u00f3n Biom\u00e9dica en Red Diabetes y Enfermedades Metab\u00f3licas Asociadas","ror":"https://ror.org/00dwgct76","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2801357902","https://openalex.org/I4210092133","https://openalex.org/I4387152914"]},{"id":"https://openalex.org/I4210101772","display_name":"Institut de Recerca Biom\u00e8dica Catalunya Sud","ror":"https://ror.org/01av3a615","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210101772","https://openalex.org/I4387153040"]},{"id":"https://openalex.org/I55952717","display_name":"Universitat Rovira i Virgili","ror":"https://ror.org/00g5sqv46","country_code":"ES","type":"education","lineage":["https://openalex.org/I55952717"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Noelia Ram\u00edrez","raw_affiliation_strings":["Department of Electronic Engineering, Rovira i Virgili University, IISPV, Tarragona, Spain","Spanish Biomedical Research Centre in Diabetes and Associated Metabolic Disorders (CIBERDEM), Madrid, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electronic Engineering, Rovira i Virgili University, IISPV, Tarragona, Spain","institution_ids":["https://openalex.org/I4210101772","https://openalex.org/I55952717"]},{"raw_affiliation_string":"Spanish Biomedical Research Centre in Diabetes and Associated Metabolic Disorders (CIBERDEM), Madrid, Spain","institution_ids":["https://openalex.org/I4210092133"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066505668","display_name":"Esteban del Castillo","orcid":"https://orcid.org/0000-0002-1743-656X"},"institutions":[{"id":"https://openalex.org/I4210101772","display_name":"Institut de Recerca Biom\u00e8dica Catalunya Sud","ror":"https://ror.org/01av3a615","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210101772","https://openalex.org/I4387153040"]},{"id":"https://openalex.org/I55952717","display_name":"Universitat Rovira i Virgili","ror":"https://ror.org/00g5sqv46","country_code":"ES","type":"education","lineage":["https://openalex.org/I55952717"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Esteban del Castillo","raw_affiliation_strings":["Department of Electronic Engineering, Rovira i Virgili University, IISPV, Tarragona, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electronic Engineering, Rovira i Virgili University, IISPV, Tarragona, Spain","institution_ids":["https://openalex.org/I4210101772","https://openalex.org/I55952717"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033757285","display_name":"\u00d3scar Yanes","orcid":"https://orcid.org/0000-0003-3695-7157"},"institutions":[{"id":"https://openalex.org/I4210092133","display_name":"Centro de Investigaci\u00f3n Biom\u00e9dica en Red Diabetes y Enfermedades Metab\u00f3licas Asociadas","ror":"https://ror.org/00dwgct76","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2801357902","https://openalex.org/I4210092133","https://openalex.org/I4387152914"]},{"id":"https://openalex.org/I4210101772","display_name":"Institut de Recerca Biom\u00e8dica Catalunya Sud","ror":"https://ror.org/01av3a615","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210101772","https://openalex.org/I4387153040"]},{"id":"https://openalex.org/I55952717","display_name":"Universitat Rovira i Virgili","ror":"https://ror.org/00g5sqv46","country_code":"ES","type":"education","lineage":["https://openalex.org/I55952717"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Oscar Yanes","raw_affiliation_strings":["Department of Electronic Engineering, Rovira i Virgili University, IISPV, Tarragona, Spain","Spanish Biomedical Research Centre in Diabetes and Associated Metabolic Disorders (CIBERDEM), Madrid, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electronic Engineering, Rovira i Virgili University, IISPV, Tarragona, Spain","institution_ids":["https://openalex.org/I4210101772","https://openalex.org/I55952717"]},{"raw_affiliation_string":"Spanish Biomedical Research Centre in Diabetes and Associated Metabolic Disorders (CIBERDEM), Madrid, Spain","institution_ids":["https://openalex.org/I4210092133"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057425358","display_name":"J. Brezmes","orcid":"https://orcid.org/0000-0002-7704-8550"},"institutions":[{"id":"https://openalex.org/I4210092133","display_name":"Centro de Investigaci\u00f3n Biom\u00e9dica en Red Diabetes y Enfermedades Metab\u00f3licas Asociadas","ror":"https://ror.org/00dwgct76","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2801357902","https://openalex.org/I4210092133","https://openalex.org/I4387152914"]},{"id":"https://openalex.org/I4210101772","display_name":"Institut de Recerca Biom\u00e8dica Catalunya Sud","ror":"https://ror.org/01av3a615","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210101772","https://openalex.org/I4387153040"]},{"id":"https://openalex.org/I55952717","display_name":"Universitat Rovira i Virgili","ror":"https://ror.org/00g5sqv46","country_code":"ES","type":"education","lineage":["https://openalex.org/I55952717"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Jes\u00fas Brezmes","raw_affiliation_strings":["Department of Electronic Engineering, Rovira i Virgili University, IISPV, Tarragona, Spain","Spanish Biomedical Research Centre in Diabetes and Associated Metabolic Disorders (CIBERDEM), Madrid, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electronic Engineering, Rovira i Virgili University, IISPV, Tarragona, Spain","institution_ids":["https://openalex.org/I4210101772","https://openalex.org/I55952717"]},{"raw_affiliation_string":"Spanish Biomedical Research Centre in Diabetes and Associated Metabolic Disorders (CIBERDEM), Madrid, Spain","institution_ids":["https://openalex.org/I4210092133"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5084239219","display_name":"Xavier Correig","orcid":"https://orcid.org/0000-0002-6902-3054"},"institutions":[{"id":"https://openalex.org/I4210092133","display_name":"Centro de Investigaci\u00f3n Biom\u00e9dica en Red Diabetes y Enfermedades Metab\u00f3licas Asociadas","ror":"https://ror.org/00dwgct76","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2801357902","https://openalex.org/I4210092133","https://openalex.org/I4387152914"]},{"id":"https://openalex.org/I4210101772","display_name":"Institut de Recerca Biom\u00e8dica Catalunya Sud","ror":"https://ror.org/01av3a615","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210101772","https://openalex.org/I4387153040"]},{"id":"https://openalex.org/I55952717","display_name":"Universitat Rovira i Virgili","ror":"https://ror.org/00g5sqv46","country_code":"ES","type":"education","lineage":["https://openalex.org/I55952717"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Xavier Correig","raw_affiliation_strings":["Department of Electronic Engineering, Rovira i Virgili University, IISPV, Tarragona, Spain","Spanish Biomedical Research Centre in Diabetes and Associated Metabolic Disorders (CIBERDEM), Madrid, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electronic Engineering, Rovira i Virgili University, IISPV, Tarragona, Spain","institution_ids":["https://openalex.org/I4210101772","https://openalex.org/I55952717"]},{"raw_affiliation_string":"Spanish Biomedical Research Centre in Diabetes and Associated Metabolic Disorders (CIBERDEM), Madrid, Spain","institution_ids":["https://openalex.org/I4210092133"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5057425358"],"corresponding_institution_ids":["https://openalex.org/I4210092133","https://openalex.org/I4210101772","https://openalex.org/I55952717"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":2.3398,"has_fulltext":true,"cited_by_count":47,"citation_normalized_percentile":{"value":0.87870118,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":96,"max":99},"biblio":{"volume":"33","issue":"15","first_page":"2427","last_page":"2428"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10683","display_name":"Mass Spectrometry Techniques and Applications","score":0.6161999702453613,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10683","display_name":"Mass Spectrometry Techniques and Applications","score":0.6161999702453613,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.12049999833106995,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.11900000274181366,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8320034742355347},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.7496364116668701},{"id":"https://openalex.org/keywords/documentation","display_name":"Documentation","score":0.6589489579200745},{"id":"https://openalex.org/keywords/graphical-user-interface","display_name":"Graphical user interface","score":0.6506489515304565},{"id":"https://openalex.org/keywords/memory-footprint","display_name":"Memory footprint","score":0.5947579145431519},{"id":"https://openalex.org/keywords/source-code","display_name":"Source code","score":0.593575656414032},{"id":"https://openalex.org/keywords/interface","display_name":"Interface (matter)","score":0.5164480209350586},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.4992959499359131},{"id":"https://openalex.org/keywords/data-visualization","display_name":"Data visualization","score":0.46869659423828125},{"id":"https://openalex.org/keywords/open-source","display_name":"Open source","score":0.46675539016723633},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.45984944701194763},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.38607290387153625},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.3859008848667145},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3422183096408844},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.325322687625885},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.2832178473472595}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8320034742355347},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.7496364116668701},{"id":"https://openalex.org/C56666940","wikidata":"https://www.wikidata.org/wiki/Q788790","display_name":"Documentation","level":2,"score":0.6589489579200745},{"id":"https://openalex.org/C37789001","wikidata":"https://www.wikidata.org/wiki/Q782543","display_name":"Graphical user interface","level":2,"score":0.6506489515304565},{"id":"https://openalex.org/C74912251","wikidata":"https://www.wikidata.org/wiki/Q6815727","display_name":"Memory footprint","level":2,"score":0.5947579145431519},{"id":"https://openalex.org/C43126263","wikidata":"https://www.wikidata.org/wiki/Q128751","display_name":"Source code","level":2,"score":0.593575656414032},{"id":"https://openalex.org/C113843644","wikidata":"https://www.wikidata.org/wiki/Q901882","display_name":"Interface (matter)","level":4,"score":0.5164480209350586},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.4992959499359131},{"id":"https://openalex.org/C172367668","wikidata":"https://www.wikidata.org/wiki/Q6504956","display_name":"Data visualization","level":3,"score":0.46869659423828125},{"id":"https://openalex.org/C3018397939","wikidata":"https://www.wikidata.org/wiki/Q3644502","display_name":"Open source","level":3,"score":0.46675539016723633},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.45984944701194763},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.38607290387153625},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.3859008848667145},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3422183096408844},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.325322687625885},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.2832178473472595},{"id":"https://openalex.org/C129307140","wikidata":"https://www.wikidata.org/wiki/Q6795880","display_name":"Maximum bubble pressure method","level":3,"score":0.0},{"id":"https://openalex.org/C157915830","wikidata":"https://www.wikidata.org/wiki/Q2928001","display_name":"Bubble","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btx182","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btx182","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/33/15/2427/25157726/btx182.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:28369250","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/28369250","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btx182","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btx182","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/33/15/2427/25157726/btx182.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Industry, innovation and infrastructure","id":"https://metadata.un.org/sdg/9","score":0.49000000953674316}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2597856736.pdf","grobid_xml":"https://content.openalex.org/works/W2597856736.grobid-xml"},"referenced_works_count":5,"referenced_works":["https://openalex.org/W2023370513","https://openalex.org/W2057652593","https://openalex.org/W2075247874","https://openalex.org/W2106855677","https://openalex.org/W2507828173"],"related_works":["https://openalex.org/W2113128227","https://openalex.org/W632256878","https://openalex.org/W4211197663","https://openalex.org/W2491403535","https://openalex.org/W3123068371","https://openalex.org/W2624709009","https://openalex.org/W2479811461","https://openalex.org/W2104915799","https://openalex.org/W4311938462","https://openalex.org/W2355429491"],"abstract_inverted_index":{"SUMMARY:":[0],"R":[1,34,56,100,117,124],"platform":[2,131],"provides":[3],"some":[4],"packages":[5],"that":[6,107],"are":[7,152,163],"useful":[8],"to":[9,23,46,67,95,111],"process":[10],"mass":[11],"spectrometry":[12],"imaging":[13],"(MSI)":[14],"data;":[15],"however,":[16],"none":[17],"of":[18,105,121],"them":[19],"provide":[20],"an":[21,33,43],"easy":[22],"use":[24],"graphical":[25],"user":[26],"interface":[27],"(GUI).":[28],"Here,":[29],"we":[30],"introduce":[31],"rMSI,":[32],"package":[35],"for":[36,83,123,132],"MSI":[37,48,133],"data":[38,49,59,87,114,134,151,162],"analysis":[39],"focused":[40],"on":[41],"providing":[42],"efficient":[44],"way":[45],"manage":[47],"together":[50],"with":[51],"a":[52,74,103,127,147],"GUI":[53,80],"integrated":[54,97],"in":[55,62,98],"environment.":[57],"MS":[58,113],"is":[60,81,93],"loaded":[61],"rMSI":[63,79,92,122],"custom":[64],"format":[65],"optimized":[66],"minimize":[68],"the":[69,99,145],"memory":[70],"footprint":[71],"yet":[72],"maintaining":[73],"fast":[75],"spectra":[76],"access.":[77],"The":[78,119,143],"designed":[82,94],"simple":[84],"and":[85,89,129,138,149],"effective":[86],"exploration":[88],"visualization.":[90],"Moreover,":[91],"be":[96,109],"environment":[101,125],"through":[102],"library":[104],"functions":[106],"can":[108],"used":[110],"share":[112],"across":[115],"others":[116],"packages.":[118],"release":[120],"establishes":[126],"novel":[128],"flexible":[130],"analysis,":[135],"completely":[136],"free":[137],"open-source.":[139],"AVAILABILITY":[140],"AND":[141],"IMPLEMENTATION:":[142],"code,":[144],"documentation,":[146],"tutorial":[148],"example":[150],"available":[153,164],"open-source":[154],"at:":[155],"github.com/prafols/rMSI.":[156],"CONTACT:":[157],"jesus.brezmes@urv.cat.":[158],"SUPPLEMENTARY":[159],"INFORMATION:":[160],"Supplementary":[161],"at":[165],"Bioinformatics":[166],"online.":[167]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":9},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":7},{"year":2020,"cited_by_count":10},{"year":2019,"cited_by_count":5},{"year":2018,"cited_by_count":3}],"updated_date":"2026-07-22T07:51:19.307946","created_date":"2025-10-10T00:00:00"}
