{"id":"https://openalex.org/W2564003941","doi":"https://doi.org/10.1093/bioinformatics/btw760","title":"PBIT: Pipeline Builder for Identification of drug Targets for infectious diseases","display_name":"PBIT: Pipeline Builder for Identification of drug Targets for infectious diseases","publication_year":2016,"publication_date":"2016-11-25","ids":{"openalex":"https://openalex.org/W2564003941","doi":"https://doi.org/10.1093/bioinformatics/btw760","mag":"2564003941","pmid":"https://pubmed.ncbi.nlm.nih.gov/28039165"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btw760","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btw760","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/33/6/929/25147925/btw760.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/33/6/929/25147925/btw760.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5045340416","display_name":"Gauri Shende","orcid":null},"institutions":[{"id":"https://openalex.org/I143929237","display_name":"National Institute for Research in Reproductive Health","ror":"https://ror.org/017je7s69","country_code":"IN","type":"facility","lineage":["https://openalex.org/I143929237","https://openalex.org/I37048141"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Gauri Shende","raw_affiliation_strings":["ICMR Biomedical Informatics Center, National Institute for Research in Reproductive Health, Mumbai, India"],"affiliations":[{"raw_affiliation_string":"ICMR Biomedical Informatics Center, National Institute for Research in Reproductive Health, Mumbai, India","institution_ids":["https://openalex.org/I143929237"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085604914","display_name":"Harshala Haldankar","orcid":null},"institutions":[{"id":"https://openalex.org/I143929237","display_name":"National Institute for Research in Reproductive Health","ror":"https://ror.org/017je7s69","country_code":"IN","type":"facility","lineage":["https://openalex.org/I143929237","https://openalex.org/I37048141"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Harshala Haldankar","raw_affiliation_strings":["ICMR Biomedical Informatics Center, National Institute for Research in Reproductive Health, Mumbai, India"],"affiliations":[{"raw_affiliation_string":"ICMR Biomedical Informatics Center, National Institute for Research in Reproductive Health, Mumbai, India","institution_ids":["https://openalex.org/I143929237"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086382370","display_name":"Ram Shankar Barai","orcid":"https://orcid.org/0000-0001-9999-4575"},"institutions":[{"id":"https://openalex.org/I143929237","display_name":"National Institute for Research in Reproductive Health","ror":"https://ror.org/017je7s69","country_code":"IN","type":"facility","lineage":["https://openalex.org/I143929237","https://openalex.org/I37048141"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Ram Shankar Barai","raw_affiliation_strings":["ICMR Biomedical Informatics Center, National Institute for Research in Reproductive Health, Mumbai, India"],"affiliations":[{"raw_affiliation_string":"ICMR Biomedical Informatics Center, National Institute for Research in Reproductive Health, Mumbai, India","institution_ids":["https://openalex.org/I143929237"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014423580","display_name":"Mohammed Husain Bharmal","orcid":null},"institutions":[{"id":"https://openalex.org/I143929237","display_name":"National Institute for Research in Reproductive Health","ror":"https://ror.org/017je7s69","country_code":"IN","type":"facility","lineage":["https://openalex.org/I143929237","https://openalex.org/I37048141"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Mohammed Husain Bharmal","raw_affiliation_strings":["ICMR Biomedical Informatics Center, National Institute for Research in Reproductive Health, Mumbai, India"],"affiliations":[{"raw_affiliation_string":"ICMR Biomedical Informatics Center, National Institute for Research in Reproductive Health, Mumbai, India","institution_ids":["https://openalex.org/I143929237"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054147276","display_name":"Vinit Shetty","orcid":null},"institutions":[{"id":"https://openalex.org/I143929237","display_name":"National Institute for Research in Reproductive Health","ror":"https://ror.org/017je7s69","country_code":"IN","type":"facility","lineage":["https://openalex.org/I143929237","https://openalex.org/I37048141"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Vinit Shetty","raw_affiliation_strings":["ICMR Biomedical Informatics Center, National Institute for Research in Reproductive Health, Mumbai, India"],"affiliations":[{"raw_affiliation_string":"ICMR Biomedical Informatics Center, National Institute for Research in Reproductive Health, Mumbai, India","institution_ids":["https://openalex.org/I143929237"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5053059633","display_name":"Susan Idicula\u2010Thomas","orcid":"https://orcid.org/0000-0003-3766-6757"},"institutions":[{"id":"https://openalex.org/I143929237","display_name":"National Institute for Research in Reproductive Health","ror":"https://ror.org/017je7s69","country_code":"IN","type":"facility","lineage":["https://openalex.org/I143929237","https://openalex.org/I37048141"]}],"countries":["IN"],"is_corresponding":true,"raw_author_name":"Susan Idicula-Thomas","raw_affiliation_strings":["ICMR Biomedical Informatics Center, National Institute for Research in Reproductive Health, Mumbai, India"],"affiliations":[{"raw_affiliation_string":"ICMR Biomedical Informatics Center, National Institute for Research in Reproductive Health, Mumbai, India","institution_ids":["https://openalex.org/I143929237"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5053059633"],"corresponding_institution_ids":["https://openalex.org/I143929237"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":0.1667,"has_fulltext":false,"cited_by_count":39,"citation_normalized_percentile":{"value":0.64614641,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"33","issue":"6","first_page":"929","last_page":"931"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11124","display_name":"Protein purification and stability","score":0.9944000244140625,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11124","display_name":"Protein purification and stability","score":0.9944000244140625,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11048","display_name":"Bacteriophages and microbial interactions","score":0.993399977684021,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9932000041007996,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.6684097051620483},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.6444833874702454},{"id":"https://openalex.org/keywords/drug","display_name":"Drug","score":0.592820405960083},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4786076247692108},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.38630732893943787},{"id":"https://openalex.org/keywords/virology","display_name":"Virology","score":0.33788442611694336},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.3111487925052643},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.2059796154499054},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.20313161611557007},{"id":"https://openalex.org/keywords/pharmacology","display_name":"Pharmacology","score":0.19857865571975708}],"concepts":[{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.6684097051620483},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.6444833874702454},{"id":"https://openalex.org/C2780035454","wikidata":"https://www.wikidata.org/wiki/Q8386","display_name":"Drug","level":2,"score":0.592820405960083},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4786076247692108},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.38630732893943787},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.33788442611694336},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.3111487925052643},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.2059796154499054},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.20313161611557007},{"id":"https://openalex.org/C98274493","wikidata":"https://www.wikidata.org/wiki/Q128406","display_name":"Pharmacology","level":1,"score":0.19857865571975708},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D002176","descriptor_name":"Candida albicans","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D002176","descriptor_name":"Candida albicans","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D002176","descriptor_name":"Candida albicans","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D002176","descriptor_name":"Candida albicans","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D002176","descriptor_name":"Candida albicans","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D002176","descriptor_name":"Candida albicans","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D003141","descriptor_name":"Communicable Diseases","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":false},{"descriptor_ui":"D003141","descriptor_name":"Communicable Diseases","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":false},{"descriptor_ui":"D003141","descriptor_name":"Communicable Diseases","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":false},{"descriptor_ui":"D003141","descriptor_name":"Communicable Diseases","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D003141","descriptor_name":"Communicable Diseases","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D003141","descriptor_name":"Communicable Diseases","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btw760","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btw760","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/33/6/929/25147925/btw760.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:28039165","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/28039165","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btw760","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btw760","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/33/6/929/25147925/btw760.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.47999998927116394}],"awards":[],"funders":[{"id":"https://openalex.org/F4320320719","display_name":"Department of Science and Technology, Ministry of Science and Technology, India","ror":"https://ror.org/0101xrq71"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2564003941.pdf","grobid_xml":"https://content.openalex.org/works/W2564003941.grobid-xml"},"referenced_works_count":15,"referenced_works":["https://openalex.org/W1571861186","https://openalex.org/W1689761783","https://openalex.org/W2003948782","https://openalex.org/W2018518196","https://openalex.org/W2030675030","https://openalex.org/W2053904909","https://openalex.org/W2068351996","https://openalex.org/W2110256992","https://openalex.org/W2113140044","https://openalex.org/W2113785850","https://openalex.org/W2119497560","https://openalex.org/W2121277457","https://openalex.org/W2227583040","https://openalex.org/W2465613542","https://openalex.org/W6667579398"],"related_works":["https://openalex.org/W3037187668","https://openalex.org/W4234772502","https://openalex.org/W2380685755","https://openalex.org/W2252100032","https://openalex.org/W4206379684","https://openalex.org/W2963436428","https://openalex.org/W2898732673","https://openalex.org/W3171253712","https://openalex.org/W2171591485","https://openalex.org/W1200423363"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":8},{"year":2023,"cited_by_count":6},{"year":2022,"cited_by_count":9},{"year":2021,"cited_by_count":7},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
