{"id":"https://openalex.org/W2508586337","doi":"https://doi.org/10.1093/bioinformatics/btw568","title":"popSTR: population-scale detection of STR variants","display_name":"popSTR: population-scale detection of STR variants","publication_year":2016,"publication_date":"2016-09-01","ids":{"openalex":"https://openalex.org/W2508586337","doi":"https://doi.org/10.1093/bioinformatics/btw568","mag":"2508586337","pmid":"https://pubmed.ncbi.nlm.nih.gov/27591079"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btw568","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btw568","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/33/24/4041/25168394/btw568.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/33/24/4041/25168394/btw568.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5042478494","display_name":"Sn\u00e6d\u00eds Kristmundsd\u00f3ttir","orcid":"https://orcid.org/0000-0001-8981-0883"},"institutions":[{"id":"https://openalex.org/I123185442","display_name":"Reykjav\u00edk University","ror":"https://ror.org/05d2kyx68","country_code":"IS","type":"education","lineage":["https://openalex.org/I123185442"]},{"id":"https://openalex.org/I1327191685","display_name":"deCODE Genetics (Iceland)","ror":"https://ror.org/04dzdm737","country_code":"IS","type":"company","lineage":["https://openalex.org/I1327191685"]}],"countries":["IS"],"is_corresponding":true,"raw_author_name":"Sn\u00e6d\u00eds Kristmundsd\u00f3ttir","raw_affiliation_strings":["deCODE genetics/Amgen, Reykjav\u00edk University, Reykjav\u00edk, Iceland"],"affiliations":[{"raw_affiliation_string":"deCODE genetics/Amgen, Reykjav\u00edk University, Reykjav\u00edk, Iceland","institution_ids":["https://openalex.org/I1327191685","https://openalex.org/I123185442"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077314175","display_name":"Brynja D. Sigurpalsdottir","orcid":"https://orcid.org/0000-0001-5227-2372"},"institutions":[{"id":"https://openalex.org/I123185442","display_name":"Reykjav\u00edk University","ror":"https://ror.org/05d2kyx68","country_code":"IS","type":"education","lineage":["https://openalex.org/I123185442"]}],"countries":["IS"],"is_corresponding":false,"raw_author_name":"Brynja D Sigurp\u00e1lsd\u00f3ttir","raw_affiliation_strings":["School of Science and Engineering, Reykjav\u00edk University, Reykjav\u00edk, Iceland"],"affiliations":[{"raw_affiliation_string":"School of Science and Engineering, Reykjav\u00edk University, Reykjav\u00edk, Iceland","institution_ids":["https://openalex.org/I123185442"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051176054","display_name":"Birte Kehr","orcid":"https://orcid.org/0000-0002-3417-7504"},"institutions":[{"id":"https://openalex.org/I123185442","display_name":"Reykjav\u00edk University","ror":"https://ror.org/05d2kyx68","country_code":"IS","type":"education","lineage":["https://openalex.org/I123185442"]},{"id":"https://openalex.org/I1327191685","display_name":"deCODE Genetics (Iceland)","ror":"https://ror.org/04dzdm737","country_code":"IS","type":"company","lineage":["https://openalex.org/I1327191685"]}],"countries":["IS"],"is_corresponding":false,"raw_author_name":"Birte Kehr","raw_affiliation_strings":["deCODE genetics/Amgen, Reykjav\u00edk University, Reykjav\u00edk, Iceland"],"affiliations":[{"raw_affiliation_string":"deCODE genetics/Amgen, Reykjav\u00edk University, Reykjav\u00edk, Iceland","institution_ids":["https://openalex.org/I1327191685","https://openalex.org/I123185442"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5004725925","display_name":"Bjarni V. Halld\u00f3rsson","orcid":"https://orcid.org/0000-0003-0756-0767"},"institutions":[{"id":"https://openalex.org/I1327191685","display_name":"deCODE Genetics (Iceland)","ror":"https://ror.org/04dzdm737","country_code":"IS","type":"company","lineage":["https://openalex.org/I1327191685"]},{"id":"https://openalex.org/I123185442","display_name":"Reykjav\u00edk University","ror":"https://ror.org/05d2kyx68","country_code":"IS","type":"education","lineage":["https://openalex.org/I123185442"]}],"countries":["IS"],"is_corresponding":true,"raw_author_name":"Bjarni V Halld\u00f3rsson","raw_affiliation_strings":["School of Science and Engineering, Reykjav\u00edk University, Reykjav\u00edk, Iceland","deCODE genetics/Amgen, Reykjav\u00edk University, Reykjav\u00edk, Iceland"],"affiliations":[{"raw_affiliation_string":"School of Science and Engineering, Reykjav\u00edk University, Reykjav\u00edk, Iceland","institution_ids":["https://openalex.org/I123185442"]},{"raw_affiliation_string":"deCODE genetics/Amgen, Reykjav\u00edk University, Reykjav\u00edk, Iceland","institution_ids":["https://openalex.org/I1327191685","https://openalex.org/I123185442"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5004725925","https://openalex.org/A5042478494"],"corresponding_institution_ids":["https://openalex.org/I123185442","https://openalex.org/I1327191685"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":2.1675,"has_fulltext":true,"cited_by_count":38,"citation_normalized_percentile":{"value":0.87694689,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"33","issue":"24","first_page":"4041","last_page":"4048"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.996999979019165,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.996999979019165,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11970","display_name":"Molecular Biology Techniques and Applications","score":0.9886999726295471,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9868999719619751,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/scale","display_name":"Scale (ratio)","score":0.6236931681632996},{"id":"https://openalex.org/keywords/population","display_name":"Population","score":0.5337556004524231},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4856080412864685},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.41655999422073364},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.4024464786052704},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3537595272064209},{"id":"https://openalex.org/keywords/geography","display_name":"Geography","score":0.12981274724006653},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.12591037154197693},{"id":"https://openalex.org/keywords/cartography","display_name":"Cartography","score":0.09918379783630371}],"concepts":[{"id":"https://openalex.org/C2778755073","wikidata":"https://www.wikidata.org/wiki/Q10858537","display_name":"Scale (ratio)","level":2,"score":0.6236931681632996},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.5337556004524231},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4856080412864685},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.41655999422073364},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.4024464786052704},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3537595272064209},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.12981274724006653},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.12591037154197693},{"id":"https://openalex.org/C58640448","wikidata":"https://www.wikidata.org/wiki/Q42515","display_name":"Cartography","level":1,"score":0.09918379783630371},{"id":"https://openalex.org/C99454951","wikidata":"https://www.wikidata.org/wiki/Q932068","display_name":"Environmental health","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000073336","descriptor_name":"Whole Genome Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000073336","descriptor_name":"Whole Genome Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000073336","descriptor_name":"Whole Genome Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005838","descriptor_name":"Genotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005838","descriptor_name":"Genotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005838","descriptor_name":"Genotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018895","descriptor_name":"Microsatellite Repeats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018895","descriptor_name":"Microsatellite Repeats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018895","descriptor_name":"Microsatellite Repeats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btw568","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btw568","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/33/24/4041/25168394/btw568.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:27591079","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27591079","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btw568","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btw568","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/33/24/4041/25168394/btw568.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2508586337.pdf","grobid_xml":"https://content.openalex.org/works/W2508586337.grobid-xml"},"referenced_works_count":19,"referenced_works":["https://openalex.org/W1563639047","https://openalex.org/W1973948212","https://openalex.org/W1990139627","https://openalex.org/W2003398699","https://openalex.org/W2020331089","https://openalex.org/W2030148262","https://openalex.org/W2053509358","https://openalex.org/W2075996757","https://openalex.org/W2102406302","https://openalex.org/W2103441770","https://openalex.org/W2112814753","https://openalex.org/W2119180969","https://openalex.org/W2124561138","https://openalex.org/W2131173813","https://openalex.org/W2149945800","https://openalex.org/W2155319069","https://openalex.org/W2159075303","https://openalex.org/W2227356030","https://openalex.org/W2797302139"],"related_works":["https://openalex.org/W2082860237","https://openalex.org/W2119695867","https://openalex.org/W2130076355","https://openalex.org/W1990804418","https://openalex.org/W1993764875","https://openalex.org/W2046158694","https://openalex.org/W2788277189","https://openalex.org/W2013243191","https://openalex.org/W1971568933","https://openalex.org/W2117258802"],"abstract_inverted_index":{"snaedis.kristmundsdottir@decode.is":[0],"or":[1],"bjarni.halldorsson@decode.is.":[2]},"counts_by_year":[{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":6},{"year":2023,"cited_by_count":6},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":4},{"year":2018,"cited_by_count":5},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
