{"id":"https://openalex.org/W2509406088","doi":"https://doi.org/10.1093/bioinformatics/btw529","title":"Corpus domain effects on distributional semantic modeling of medical terms","display_name":"Corpus domain effects on distributional semantic modeling of medical terms","publication_year":2016,"publication_date":"2016-08-16","ids":{"openalex":"https://openalex.org/W2509406088","doi":"https://doi.org/10.1093/bioinformatics/btw529","mag":"2509406088","pmid":"https://pubmed.ncbi.nlm.nih.gov/27531100"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btw529","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btw529","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/32/23/3635/16920921/btw529.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/32/23/3635/16920921/btw529.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5056292346","display_name":"Serguei Pakhomov","orcid":"https://orcid.org/0000-0001-5048-4929"},"institutions":[{"id":"https://openalex.org/I130238516","display_name":"University of Minnesota","ror":"https://ror.org/017zqws13","country_code":"US","type":"education","lineage":["https://openalex.org/I130238516"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Serguei V.S. Pakhomov","raw_affiliation_strings":["1College of Pharmacy, University of Minnesota, Minneapolis, MN 55455, USA","2Institute for Health Informatics, University of Minnesota, Minneapolis, MN 55455, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1College of Pharmacy, University of Minnesota, Minneapolis, MN 55455, USA","institution_ids":["https://openalex.org/I130238516"]},{"raw_affiliation_string":"2Institute for Health Informatics, University of Minnesota, Minneapolis, MN 55455, USA","institution_ids":["https://openalex.org/I130238516"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018350043","display_name":"Greg P. Finley","orcid":null},"institutions":[{"id":"https://openalex.org/I130238516","display_name":"University of Minnesota","ror":"https://ror.org/017zqws13","country_code":"US","type":"education","lineage":["https://openalex.org/I130238516"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Greg Finley","raw_affiliation_strings":["2Institute for Health Informatics, University of Minnesota, Minneapolis, MN 55455, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"2Institute for Health Informatics, University of Minnesota, Minneapolis, MN 55455, USA","institution_ids":["https://openalex.org/I130238516"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015676655","display_name":"Reed McEwan","orcid":null},"institutions":[{"id":"https://openalex.org/I130238516","display_name":"University of Minnesota","ror":"https://ror.org/017zqws13","country_code":"US","type":"education","lineage":["https://openalex.org/I130238516"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Reed McEwan","raw_affiliation_strings":["2Institute for Health Informatics, University of Minnesota, Minneapolis, MN 55455, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"2Institute for Health Informatics, University of Minnesota, Minneapolis, MN 55455, USA","institution_ids":["https://openalex.org/I130238516"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100322872","display_name":"Yan Wang","orcid":"https://orcid.org/0000-0003-0671-7312"},"institutions":[{"id":"https://openalex.org/I130238516","display_name":"University of Minnesota","ror":"https://ror.org/017zqws13","country_code":"US","type":"education","lineage":["https://openalex.org/I130238516"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yan Wang","raw_affiliation_strings":["2Institute for Health Informatics, University of Minnesota, Minneapolis, MN 55455, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"2Institute for Health Informatics, University of Minnesota, Minneapolis, MN 55455, USA","institution_ids":["https://openalex.org/I130238516"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5025398350","display_name":"Genevieve B. Melton","orcid":"https://orcid.org/0000-0001-5193-1663"},"institutions":[{"id":"https://openalex.org/I130238516","display_name":"University of Minnesota","ror":"https://ror.org/017zqws13","country_code":"US","type":"education","lineage":["https://openalex.org/I130238516"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Genevieve B. Melton","raw_affiliation_strings":["2Institute for Health Informatics, University of Minnesota, Minneapolis, MN 55455, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"2Institute for Health Informatics, University of Minnesota, Minneapolis, MN 55455, USA","institution_ids":["https://openalex.org/I130238516"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5056292346"],"corresponding_institution_ids":["https://openalex.org/I130238516"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":11.3171,"has_fulltext":false,"cited_by_count":119,"citation_normalized_percentile":{"value":0.98821737,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":100},"biblio":{"volume":"32","issue":"23","first_page":"3635","last_page":"3644"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.7713000178337097,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.7713000178337097,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.131400004029274,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.03240000084042549,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7718151211738586},{"id":"https://openalex.org/keywords/semantic-similarity","display_name":"Semantic similarity","score":0.7427964806556702},{"id":"https://openalex.org/keywords/benchmark","display_name":"Benchmark (surveying)","score":0.6632125973701477},{"id":"https://openalex.org/keywords/semantics","display_name":"Semantics (computer science)","score":0.6605501174926758},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.6441230177879333},{"id":"https://openalex.org/keywords/distributional-semantics","display_name":"Distributional semantics","score":0.6387180089950562},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.6365706920623779},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.6057104468345642},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.5816001892089844},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5709867477416992},{"id":"https://openalex.org/keywords/unified-medical-language-system","display_name":"Unified Medical Language System","score":0.5139536261558533},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.4903552532196045},{"id":"https://openalex.org/keywords/biomedical-text-mining","display_name":"Biomedical text mining","score":0.41948050260543823},{"id":"https://openalex.org/keywords/text-mining","display_name":"Text mining","score":0.30157774686813354}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7718151211738586},{"id":"https://openalex.org/C130318100","wikidata":"https://www.wikidata.org/wiki/Q2268914","display_name":"Semantic similarity","level":2,"score":0.7427964806556702},{"id":"https://openalex.org/C185798385","wikidata":"https://www.wikidata.org/wiki/Q1161707","display_name":"Benchmark (surveying)","level":2,"score":0.6632125973701477},{"id":"https://openalex.org/C184337299","wikidata":"https://www.wikidata.org/wiki/Q1437428","display_name":"Semantics (computer science)","level":2,"score":0.6605501174926758},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.6441230177879333},{"id":"https://openalex.org/C2778828372","wikidata":"https://www.wikidata.org/wiki/Q5283209","display_name":"Distributional semantics","level":3,"score":0.6387180089950562},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.6365706920623779},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.6057104468345642},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.5816001892089844},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5709867477416992},{"id":"https://openalex.org/C69505689","wikidata":"https://www.wikidata.org/wiki/Q455338","display_name":"Unified Medical Language System","level":2,"score":0.5139536261558533},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.4903552532196045},{"id":"https://openalex.org/C165141518","wikidata":"https://www.wikidata.org/wiki/Q4915126","display_name":"Biomedical text mining","level":3,"score":0.41948050260543823},{"id":"https://openalex.org/C71472368","wikidata":"https://www.wikidata.org/wiki/Q676880","display_name":"Text mining","level":2,"score":0.30157774686813354},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C187736073","wikidata":"https://www.wikidata.org/wiki/Q2920921","display_name":"Management","level":1,"score":0.0},{"id":"https://openalex.org/C13280743","wikidata":"https://www.wikidata.org/wiki/Q131089","display_name":"Geodesy","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012015","descriptor_name":"Reference Standards","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012015","descriptor_name":"Reference Standards","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012015","descriptor_name":"Reference Standards","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017432","descriptor_name":"Unified Medical Language System","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017432","descriptor_name":"Unified Medical Language System","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017432","descriptor_name":"Unified Medical Language System","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btw529","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btw529","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/32/23/3635/16920921/btw529.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:27531100","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27531100","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:5181540","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5181540","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btw529","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btw529","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/32/23/3635/16920921/btw529.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education","score":0.6600000262260437}],"awards":[{"id":"https://openalex.org/G3218576536","display_name":null,"funder_award_id":"R01 LM009623","funder_id":"https://openalex.org/F4320337372","funder_display_name":"U.S. National Library of Medicine"}],"funders":[{"id":"https://openalex.org/F4320337372","display_name":"U.S. National Library of Medicine","ror":"https://ror.org/0060t0j89"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":41,"referenced_works":["https://openalex.org/W58804258","https://openalex.org/W202767273","https://openalex.org/W242743621","https://openalex.org/W816420344","https://openalex.org/W1615991656","https://openalex.org/W1647729745","https://openalex.org/W1659833910","https://openalex.org/W1732828232","https://openalex.org/W1783597500","https://openalex.org/W1907013787","https://openalex.org/W1959533457","https://openalex.org/W1971276189","https://openalex.org/W2028102159","https://openalex.org/W2038721957","https://openalex.org/W2041025542","https://openalex.org/W2059331879","https://openalex.org/W2076766778","https://openalex.org/W2080725524","https://openalex.org/W2084377579","https://openalex.org/W2098173334","https://openalex.org/W2110261093","https://openalex.org/W2116247729","https://openalex.org/W2127563440","https://openalex.org/W2128049108","https://openalex.org/W2136930489","https://openalex.org/W2138192249","https://openalex.org/W2149600008","https://openalex.org/W2165858555","https://openalex.org/W2171690228","https://openalex.org/W2251157338","https://openalex.org/W2251253014","https://openalex.org/W2251803266","https://openalex.org/W2285122704","https://openalex.org/W2514719829","https://openalex.org/W2534712034","https://openalex.org/W2604272474","https://openalex.org/W2610930722","https://openalex.org/W2912372357","https://openalex.org/W6602395363","https://openalex.org/W6608056421","https://openalex.org/W6685417613"],"related_works":["https://openalex.org/W2303098424","https://openalex.org/W2149600008","https://openalex.org/W2122194007","https://openalex.org/W2041025542","https://openalex.org/W1569660094","https://openalex.org/W2052511096","https://openalex.org/W3185751515","https://openalex.org/W1840682977","https://openalex.org/W4299488910","https://openalex.org/W3004540147"],"abstract_inverted_index":{"MOTIVATION:":[0],"Automatically":[1],"quantifying":[2],"semantic":[3,43,113,238,264],"similarity":[4,114,161,179,265],"and":[5,34,58,69,115,118,133,162,180,204,235,244,255,266],"relatedness":[6,44,119,193,267],"between":[7],"clinical":[8,32,54,82,88,101,173,200,226,233,243],"terms":[9,89,102,234],"is":[10,46],"an":[11],"important":[12],"aspect":[13],"of":[14,28,42,50,53,61,87,100,150,189,225,232],"text":[15,55,123,149],"mining":[16],"from":[17,66,122,147,172],"electronic":[18],"health":[19],"records,":[20],"which":[21],"are":[22,72,166,240,269,282],"increasingly":[23],"recognized":[24],"as":[25,78,140,272],"valuable":[26],"sources":[27],"phenotypic":[29],"information":[30],"for":[31,81,112,160,164,178,182,195,242],"genomics":[33],"bioinformatics":[35],"research.":[36],"A":[37],"key":[38],"obstacle":[39],"to":[40,56,84,91,228,262],"development":[41],"measures":[45,120,145,170,194,268],"the":[47,138,187,230,275],"limited":[48],"availability":[49],"large":[51],"quantities":[52],"researchers":[57],"developers":[59],"outside":[60],"major":[62],"medical":[63],"centers.":[64],"Text":[65],"general":[67],"English":[68],"biomedical":[70,151,206,218,245],"literature":[71],"freely":[73],"available;":[74],"however,":[75],"their":[76],"validity":[77],"a":[79,105,199,205],"substitute":[80],"domain":[83],"represent":[85,229],"semantics":[86,231],"remains":[90],"be":[92,221],"demonstrated.":[93],"RESULTS:":[94],"We":[95,142,184,212],"constructed":[96],"neural":[97,190],"network":[98,191],"representations":[99],"found":[103,143,213],"in":[104,125,153,198,223,259,274],"publicly":[106,270],"available":[107,271,283],"benchmark":[108,139],"dataset":[109],"manually":[110],"labeled":[111],"relatedness.":[116],"Similarity":[117],"computed":[121,146,171],"corpora":[124],"three":[126],"domains":[127],"(Clinical":[128],"Notes,":[129],"PubMed":[130,154],"Central":[131,155],"articles":[132,152,219],"Wikipedia)":[134],"were":[135],"compared":[136],"using":[137],"reference.":[141],"that":[144,236],"full":[148],"repository":[156],"(rho":[157,175],"=":[158,176],"0.62":[159],"0.58":[163],"relatedness)":[165],"on":[167],"par":[168],"with":[169,215],"reports":[174,227],"0.60":[177],"0.57":[181],"relatedness).":[183],"also":[185],"evaluated":[186],"use":[188],"based":[192],"query":[196],"expansion":[197],"document":[201],"retrieval":[202],"task":[203],"term":[207],"word":[208],"sense":[209],"disambiguation":[210],"task.":[211],"that,":[214],"some":[216],"limitations,":[217],"may":[220],"used":[222,258],"lieu":[224],"distributional":[237],"methods":[239],"useful":[241],"natural":[246],"language":[247],"processing":[248],"applications.":[249],"AVAILABILITY":[250],"AND":[251],"IMPLEMENTATION:":[252],"The":[253],"software":[254],"reference":[256],"standards":[257],"this":[260],"study":[261],"evaluate":[263],"detailed":[273],"article.":[276],"CONTACT:":[277],"pakh0002@umn.eduSupplementary":[278],"information:":[279],"Supplementary":[280],"data":[281],"at":[284],"Bioinformatics":[285],"online.":[286]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":7},{"year":2022,"cited_by_count":9},{"year":2021,"cited_by_count":17},{"year":2020,"cited_by_count":12},{"year":2019,"cited_by_count":27},{"year":2018,"cited_by_count":20},{"year":2017,"cited_by_count":15},{"year":2016,"cited_by_count":3}],"updated_date":"2026-06-24T13:16:06.693445","created_date":"2025-10-10T00:00:00"}
