{"id":"https://openalex.org/W2499539429","doi":"https://doi.org/10.1093/bioinformatics/btw484","title":"scphaser: haplotype inference using single-cell RNA-seq data","display_name":"scphaser: haplotype inference using single-cell RNA-seq data","publication_year":2016,"publication_date":"2016-08-06","ids":{"openalex":"https://openalex.org/W2499539429","doi":"https://doi.org/10.1093/bioinformatics/btw484","mag":"2499539429","pmid":"https://pubmed.ncbi.nlm.nih.gov/27497440"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btw484","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btw484","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/32/19/3038/25072615/btw484.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/32/19/3038/25072615/btw484.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5055025766","display_name":"Daniel Edsg\u00e4rd","orcid":null},"institutions":[{"id":"https://openalex.org/I28166907","display_name":"Karolinska Institutet","ror":"https://ror.org/056d84691","country_code":"SE","type":"education","lineage":["https://openalex.org/I28166907"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Daniel Edsg\u00e4rd","raw_affiliation_strings":["1 Department of Cell and Molecular Biology, Karolinska Institutet, 171 77 Stockholm, Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Cell and Molecular Biology, Karolinska Institutet, 171 77 Stockholm, Sweden","institution_ids":["https://openalex.org/I28166907"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052918715","display_name":"Bj\u00f6rn Reinius","orcid":"https://orcid.org/0000-0002-7021-5248"},"institutions":[{"id":"https://openalex.org/I28166907","display_name":"Karolinska Institutet","ror":"https://ror.org/056d84691","country_code":"SE","type":"education","lineage":["https://openalex.org/I28166907"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Bj\u00f6rn Reinius","raw_affiliation_strings":["1 Department of Cell and Molecular Biology, Karolinska Institutet, 171 77 Stockholm, Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Cell and Molecular Biology, Karolinska Institutet, 171 77 Stockholm, Sweden","institution_ids":["https://openalex.org/I28166907"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5077749659","display_name":"Rickard Sandberg","orcid":"https://orcid.org/0000-0001-6473-1740"},"institutions":[{"id":"https://openalex.org/I28166907","display_name":"Karolinska Institutet","ror":"https://ror.org/056d84691","country_code":"SE","type":"education","lineage":["https://openalex.org/I28166907"]},{"id":"https://openalex.org/I4210133710","display_name":"Ludwig Cancer Research","ror":"https://ror.org/03gvptg28","country_code":"SE","type":"nonprofit","lineage":["https://openalex.org/I4210133710","https://openalex.org/I4210150094"]}],"countries":["SE"],"is_corresponding":true,"raw_author_name":"Rickard Sandberg","raw_affiliation_strings":["1 Department of Cell and Molecular Biology, Karolinska Institutet, 171 77 Stockholm, Sweden","2 Ludwig Institute for Cancer Research, Box 240, 171 77 Stockholm, Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Cell and Molecular Biology, Karolinska Institutet, 171 77 Stockholm, Sweden","institution_ids":["https://openalex.org/I28166907"]},{"raw_affiliation_string":"2 Ludwig Institute for Cancer Research, Box 240, 171 77 Stockholm, Sweden","institution_ids":["https://openalex.org/I4210133710"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5077749659"],"corresponding_institution_ids":["https://openalex.org/I28166907","https://openalex.org/I4210133710"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":1.7408,"has_fulltext":true,"cited_by_count":20,"citation_normalized_percentile":{"value":0.84981193,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"32","issue":"19","first_page":"3038","last_page":"3040"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9948999881744385,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9948999881744385,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.0015999999595806003,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11213","display_name":"Genomic variations and chromosomal abnormalities","score":0.0003000000142492354,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/haplotype","display_name":"Haplotype","score":0.7757968902587891},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.621338963508606},{"id":"https://openalex.org/keywords/inference","display_name":"Inference","score":0.621179461479187},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.5826019048690796},{"id":"https://openalex.org/keywords/rna-seq","display_name":"RNA-Seq","score":0.5591062307357788},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5564063787460327},{"id":"https://openalex.org/keywords/loss-of-heterozygosity","display_name":"Loss of heterozygosity","score":0.5248656272888184},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.5014660358428955},{"id":"https://openalex.org/keywords/allele","display_name":"Allele","score":0.4323182702064514},{"id":"https://openalex.org/keywords/population","display_name":"Population","score":0.427081435918808},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.4262196719646454},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3074658215045929},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.11433514952659607},{"id":"https://openalex.org/keywords/transcriptome","display_name":"Transcriptome","score":0.10080242156982422},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.09220102429389954}],"concepts":[{"id":"https://openalex.org/C197754878","wikidata":"https://www.wikidata.org/wiki/Q80711","display_name":"Haplotype","level":4,"score":0.7757968902587891},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.621338963508606},{"id":"https://openalex.org/C2776214188","wikidata":"https://www.wikidata.org/wiki/Q408386","display_name":"Inference","level":2,"score":0.621179461479187},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.5826019048690796},{"id":"https://openalex.org/C107397762","wikidata":"https://www.wikidata.org/wiki/Q2542347","display_name":"RNA-Seq","level":5,"score":0.5591062307357788},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5564063787460327},{"id":"https://openalex.org/C143589142","wikidata":"https://www.wikidata.org/wiki/Q2617554","display_name":"Loss of heterozygosity","level":4,"score":0.5248656272888184},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5014660358428955},{"id":"https://openalex.org/C180754005","wikidata":"https://www.wikidata.org/wiki/Q80726","display_name":"Allele","level":3,"score":0.4323182702064514},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.427081435918808},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.4262196719646454},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3074658215045929},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.11433514952659607},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.10080242156982422},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.09220102429389954},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0},{"id":"https://openalex.org/C149923435","wikidata":"https://www.wikidata.org/wiki/Q37732","display_name":"Demography","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000483","descriptor_name":"Alleles","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000483","descriptor_name":"Alleles","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000483","descriptor_name":"Alleles","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000483","descriptor_name":"Alleles","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006239","descriptor_name":"Haplotypes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006239","descriptor_name":"Haplotypes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006239","descriptor_name":"Haplotypes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006239","descriptor_name":"Haplotypes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014644","descriptor_name":"Genetic Variation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014644","descriptor_name":"Genetic Variation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014644","descriptor_name":"Genetic Variation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014644","descriptor_name":"Genetic Variation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059010","descriptor_name":"Single-Cell Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059010","descriptor_name":"Single-Cell Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059010","descriptor_name":"Single-Cell Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059010","descriptor_name":"Single-Cell Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1093/bioinformatics/btw484","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btw484","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/32/19/3038/25072615/btw484.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:27497440","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27497440","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:jupiter.its.unimelb.edu.au:11343/247483","is_oa":true,"landing_page_url":"http://hdl.handle.net/11343/247483","pdf_url":"http://hdl.handle.net/11343/247483","source":{"id":"https://openalex.org/S4377196259","display_name":"Minerva Access (University of Melbourne)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I165779595","host_organization_name":"The University of Melbourne","host_organization_lineage":["https://openalex.org/I165779595"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Journal Article"},{"id":"pmh:oai:open-archive.highwire.org:bioinfo:32/19/3038","is_oa":false,"landing_page_url":"http://bioinformatics.oxfordjournals.org/cgi/content/short/32/19/3038","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"},{"id":"pmh:oai:pubmedcentral.nih.gov:5039928","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5039928","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btw484","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btw484","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/32/19/3038/25072615/btw484.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320320940","display_name":"Stiftelsen f\u00f6r\u00a0Strategisk Forskning","ror":"https://ror.org/044wr7g58"},{"id":"https://openalex.org/F4320322581","display_name":"Vetenskapsr\u00e5det","ror":"https://ror.org/03zttf063"}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2499539429.pdf"},"referenced_works_count":7,"referenced_works":["https://openalex.org/W1590384947","https://openalex.org/W1982998729","https://openalex.org/W2009441527","https://openalex.org/W2143787026","https://openalex.org/W2196135315","https://openalex.org/W2221356560","https://openalex.org/W2250097150"],"related_works":["https://openalex.org/W2353484916","https://openalex.org/W2414346359","https://openalex.org/W2001734836","https://openalex.org/W2007389278","https://openalex.org/W2414485083","https://openalex.org/W2470127854","https://openalex.org/W2355979292","https://openalex.org/W1986995752","https://openalex.org/W2038017527","https://openalex.org/W1995266986"],"abstract_inverted_index":{"UNLABELLED:":[0],"Determination":[1],"of":[2,11,71,89,101],"haplotypes":[3,67],"is":[4,114,126],"important":[5],"for":[6,33,87],"modelling":[7],"the":[8,72,84],"phenotypic":[9],"consequences":[10],"genetic":[12,35],"variation":[13],"in":[14,48,92],"diploid":[15],"organisms,":[16],"including":[17],"cis-regulatory":[18],"control":[19],"and":[20,41,81,95,103,107,133],"compound":[21],"heterozygosity.":[22],"We":[23],"realized":[24],"that":[25,59],"single-cell":[26],"RNA-seq":[27],"(scRNA-seq)":[28],"data":[29,144],"are":[30,135,145],"well":[31],"suited":[32],"phasing":[34,100],"variants,":[36],"since":[37],"both":[38,93],"transcriptional":[39],"bursts":[40],"technical":[42],"bottlenecks":[43],"cause":[44],"pronounced":[45],"allelic":[46],"fluctuations":[47],"individual":[49],"single":[50],"cells.":[51],"Here":[52],"we":[53],"present":[54],"scphaser,":[55],"an":[56,129],"R":[57,130],"package":[58],"phases":[60],"alleles":[61],"at":[62,137,147],"heterozygous":[63],"variants":[64,106,108],"to":[65,116],"reconstruct":[66],"within":[68,111],"transcribed":[69],"regions":[70],"genome":[73],"using":[74],"scRNA-seq":[75],"data.":[76],"The":[77],"devised":[78],"method":[79],"efficiently":[80],"accurately":[82],"reconstructed":[83],"known":[85],"haplotype":[86],"\u226593%":[88],"phasable":[90],"genes":[91],"human":[94],"mouse.":[96],"It":[97],"also":[98],"enables":[99],"rare":[102],"de":[104],"novo":[105],"far":[109],"apart":[110],"genes,":[112],"which":[113],"hard":[115],"attain":[117],"with":[118],"population-based":[119],"computational":[120],"inference.":[121],"AVAILABILITY":[122],"AND":[123],"IMPLEMENTATION:":[124],"scphaser":[125],"implemented":[127],"as":[128],"package.":[131],"Tutorial":[132],"code":[134],"available":[136,146],"https://github.com/edsgard/scphaser":[138],"CONTACT:":[139],"rickard.sandberg@ki.se":[140],"SUPPLEMENTARY":[141],"INFORMATION:":[142],"Supplementary":[143],"Bioinformatics":[148],"online.":[149]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":2},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":6},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":3}],"updated_date":"2026-05-22T06:13:13.366637","created_date":"2025-10-10T00:00:00"}