{"id":"https://openalex.org/W2411608355","doi":"https://doi.org/10.1093/bioinformatics/btw316","title":"UniCon3D: <i>de novo</i> protein structure prediction using united-residue conformational search via stepwise, probabilistic sampling","display_name":"UniCon3D: <i>de novo</i> protein structure prediction using united-residue conformational search via stepwise, probabilistic sampling","publication_year":2016,"publication_date":"2016-06-03","ids":{"openalex":"https://openalex.org/W2411608355","doi":"https://doi.org/10.1093/bioinformatics/btw316","mag":"2411608355","pmid":"https://pubmed.ncbi.nlm.nih.gov/27259540"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btw316","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btw316","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/32/18/2791/24406821/btw316.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/32/18/2791/24406821/btw316.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5018409409","display_name":"Debswapna Bhattacharya","orcid":"https://orcid.org/0000-0002-9630-0141"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Debswapna Bhattacharya","raw_affiliation_strings":["1 Department of Computer Science"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Computer Science","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085487073","display_name":"Renzhi Cao","orcid":"https://orcid.org/0000-0002-8345-343X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Renzhi Cao","raw_affiliation_strings":["1 Department of Computer Science"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Computer Science","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5044354277","display_name":"Jianlin Cheng","orcid":"https://orcid.org/0000-0003-0305-2853"},"institutions":[{"id":"https://openalex.org/I76835614","display_name":"University of Missouri","ror":"https://ror.org/02ymw8z06","country_code":"US","type":"education","lineage":["https://openalex.org/I76835614"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Jianlin Cheng","raw_affiliation_strings":["1 Department of Computer Science","2 Informatics Institute, University of Missouri, Columbia, MO 65211, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Computer Science","institution_ids":[]},{"raw_affiliation_string":"2 Informatics Institute, University of Missouri, Columbia, MO 65211, USA","institution_ids":["https://openalex.org/I76835614"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5044354277"],"corresponding_institution_ids":["https://openalex.org/I76835614"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":4.526,"has_fulltext":true,"cited_by_count":43,"citation_normalized_percentile":{"value":0.94968853,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":91,"max":100},"biblio":{"volume":"32","issue":"18","first_page":"2791","last_page":"2799"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.975600004196167,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.975600004196167,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.0044999998062849045,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10934","display_name":"Heat shock proteins research","score":0.00279999990016222,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/casp","display_name":"CASP","score":0.8194435238838196},{"id":"https://openalex.org/keywords/protein-structure-prediction","display_name":"Protein structure prediction","score":0.610881507396698},{"id":"https://openalex.org/keywords/probabilistic-logic","display_name":"Probabilistic logic","score":0.5775318741798401},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5644853711128235},{"id":"https://openalex.org/keywords/sampling","display_name":"Sampling (signal processing)","score":0.45035630464553833},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.43895453214645386},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.43269604444503784},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3002602756023407},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.2072589099407196},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.08545637130737305}],"concepts":[{"id":"https://openalex.org/C66153294","wikidata":"https://www.wikidata.org/wiki/Q899291","display_name":"CASP","level":4,"score":0.8194435238838196},{"id":"https://openalex.org/C18051474","wikidata":"https://www.wikidata.org/wiki/Q899656","display_name":"Protein structure prediction","level":3,"score":0.610881507396698},{"id":"https://openalex.org/C49937458","wikidata":"https://www.wikidata.org/wiki/Q2599292","display_name":"Probabilistic logic","level":2,"score":0.5775318741798401},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5644853711128235},{"id":"https://openalex.org/C140779682","wikidata":"https://www.wikidata.org/wiki/Q210868","display_name":"Sampling (signal processing)","level":3,"score":0.45035630464553833},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.43895453214645386},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.43269604444503784},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3002602756023407},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.2072589099407196},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.08545637130737305},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.0},{"id":"https://openalex.org/C106131492","wikidata":"https://www.wikidata.org/wiki/Q3072260","display_name":"Filter (signal processing)","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010825","descriptor_name":"Physics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010825","descriptor_name":"Physics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010825","descriptor_name":"Physics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010825","descriptor_name":"Physics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011336","descriptor_name":"Probability","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011336","descriptor_name":"Probability","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011336","descriptor_name":"Probability","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011336","descriptor_name":"Probability","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019985","descriptor_name":"Benchmarking","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019985","descriptor_name":"Benchmarking","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019985","descriptor_name":"Benchmarking","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019985","descriptor_name":"Benchmarking","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btw316","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btw316","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/32/18/2791/24406821/btw316.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:27259540","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27259540","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:5018369","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5018369","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:open-archive.highwire.org:bioinfo:32/18/2791","is_oa":false,"landing_page_url":"http://bioinformatics.oxfordjournals.org/cgi/content/short/32/18/2791","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btw316","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btw316","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/32/18/2791/24406821/btw316.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Affordable and clean energy","score":0.7200000286102295,"id":"https://metadata.un.org/sdg/7"}],"awards":[{"id":"https://openalex.org/G3540221635","display_name":null,"funder_award_id":"R01GM093123","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2411608355.pdf","grobid_xml":"https://content.openalex.org/works/W2411608355.grobid-xml"},"referenced_works_count":83,"referenced_works":["https://openalex.org/W1498124562","https://openalex.org/W1540530720","https://openalex.org/W1553069021","https://openalex.org/W1570643690","https://openalex.org/W1596947964","https://openalex.org/W1600769255","https://openalex.org/W1964655247","https://openalex.org/W1966711452","https://openalex.org/W1966729619","https://openalex.org/W1974289380","https://openalex.org/W1975403846","https://openalex.org/W1988695007","https://openalex.org/W1997182337","https://openalex.org/W2004461664","https://openalex.org/W2008708467","https://openalex.org/W2009166458","https://openalex.org/W2009435671","https://openalex.org/W2016707108","https://openalex.org/W2019830467","https://openalex.org/W2024759709","https://openalex.org/W2026648849","https://openalex.org/W2027189612","https://openalex.org/W2033354942","https://openalex.org/W2034190349","https://openalex.org/W2038492487","https://openalex.org/W2041701373","https://openalex.org/W2051811132","https://openalex.org/W2054549458","https://openalex.org/W2056568469","https://openalex.org/W2060107523","https://openalex.org/W2061042699","https://openalex.org/W2061095207","https://openalex.org/W2064444082","https://openalex.org/W2070783701","https://openalex.org/W2074421756","https://openalex.org/W2093498909","https://openalex.org/W2098569886","https://openalex.org/W2107110246","https://openalex.org/W2107517961","https://openalex.org/W2108349424","https://openalex.org/W2108994789","https://openalex.org/W2109801072","https://openalex.org/W2110510374","https://openalex.org/W2111270835","https://openalex.org/W2112444949","https://openalex.org/W2112489703","https://openalex.org/W2113366478","https://openalex.org/W2114115133","https://openalex.org/W2114251106","https://openalex.org/W2114340287","https://openalex.org/W2114441129","https://openalex.org/W2115540209","https://openalex.org/W2123085274","https://openalex.org/W2131474431","https://openalex.org/W2136799255","https://openalex.org/W2138755951","https://openalex.org/W2143035592","https://openalex.org/W2144213670","https://openalex.org/W2151819067","https://openalex.org/W2154106236","https://openalex.org/W2158714788","https://openalex.org/W2160784118","https://openalex.org/W2161151688","https://openalex.org/W2163118761","https://openalex.org/W2165959773","https://openalex.org/W2166575328","https://openalex.org/W2166701319","https://openalex.org/W2171089873","https://openalex.org/W2171559274","https://openalex.org/W2176135968","https://openalex.org/W2280207768","https://openalex.org/W2290412022","https://openalex.org/W2411847509","https://openalex.org/W2418704427","https://openalex.org/W2419006500","https://openalex.org/W2555451376","https://openalex.org/W2592038517","https://openalex.org/W6676186488","https://openalex.org/W6676489643","https://openalex.org/W6695187313","https://openalex.org/W6696838763","https://openalex.org/W6717252723","https://openalex.org/W7075699570"],"related_works":["https://openalex.org/W2946599741","https://openalex.org/W2147472674","https://openalex.org/W2561391236","https://openalex.org/W1888349473","https://openalex.org/W2136856901","https://openalex.org/W3165545667","https://openalex.org/W4225106352","https://openalex.org/W47248631","https://openalex.org/W3171039768","https://openalex.org/W2058542300"],"abstract_inverted_index":{"MOTIVATION:":[0],"Recent":[1],"experimental":[2],"studies":[3],"have":[4,33],"suggested":[5,67],"that":[6,79,114,204],"proteins":[7],"fold":[8],"via":[9,106],"stepwise":[10,68,107],"assembly":[11,110],"of":[12,20,85,92,111,153,175,202,224,237],"structural":[13,83],"units":[14,113],"named":[15],"'foldons'":[16],"through":[17],"the":[18,160,171,188,221],"process":[19],"sequential":[21],"stabilization.":[22],"Alongside,":[23],"latest":[24],"developments":[25],"on":[26,30,165,182,217],"computational":[27,49],"side":[28,88],"based":[29],"probabilistic":[31,77],"modeling":[32,211],"shown":[34],"promising":[35],"direction":[36],"to":[37,65,136,246],"perform":[38,157],"de":[39,52,124],"novo":[40,53,125],"protein":[41,54,60,126,210],"conformational":[42,61,90,104],"sampling":[43,105,148,208],"from":[44,170,187,220],"continuous":[45],"space.":[46],"However,":[47],"existing":[48],"approaches":[50,197],"for":[51,123,209,239],"structure":[55,127],"prediction":[56],"often":[57],"randomly":[58],"sample":[59,138],"space":[62,91],"as":[63],"opposed":[64],"experimentally":[66,101],"sampling.":[69],"RESULTS:":[70],"Here,":[71],"we":[72],"develop":[73],"a":[74,96,116,150,199],"novel":[75],"generative,":[76],"model":[78],"simultaneously":[80],"captures":[81],"local":[82],"preferences":[84],"backbone":[86],"and":[87,99,109,119,181,192,198,234,241],"chain":[89],"polypeptide":[93],"chains":[94],"in":[95,149],"united-residue":[97],"representation":[98],"performs":[100,205],"motivated":[102],"conditional":[103],"synthesis":[108],"foldon":[112],"minimizes":[115],"composite":[117],"physics":[118],"knowledge-based":[120],"energy":[121,140],"function":[122],"prediction.":[128],"The":[129],"proposed":[130],"method,":[131],"UniCon3D,":[132],"has":[133],"been":[134],"found":[135],"(i)":[137],"lower":[139],"conformations":[141],"with":[142,159],"higher":[143],"accuracy":[144],"than":[145],"traditional":[146,206],"random":[147,207],"small":[151],"benchmark":[152],"6":[154],"proteins;":[155],"(ii)":[156],"comparably":[158],"top":[161],"five":[162],"automated":[163],"methods":[164],"30":[166],"difficult":[167,184],"target":[168,185],"domains":[169,186],"11th":[172],"Critical":[173],"Assessment":[174],"Protein":[176],"Structure":[177],"Prediction":[178],"(CASP)":[179],"experiment":[180],"15":[183],"10th":[189,222],"CASP":[190],"experiment;":[191],"(iii)":[193],"outperform":[194],"two":[195],"state-of-the-art":[196],"baseline":[200],"counterpart":[201],"UniCon3D":[203,238],"aided":[212],"by":[213],"predicted":[214],"residue-residue":[215],"contacts":[216],"45":[218],"targets":[219],"edition":[223],"CASP.":[225],"AVAILABILITY":[226],"AND":[227],"IMPLEMENTATION:":[228],"Source":[229],"code,":[230],"executable":[231],"versions,":[232],"manuals":[233],"example":[235],"data":[236,256],"Linux":[240],"OSX":[242],"are":[243,257],"freely":[244],"available":[245,258],"non-commercial":[247],"users":[248],"at":[249,259],"http://sysbio.rnet.missouri.edu/UniCon3D/":[250],"CONTACT:":[251],"chengji@missouri.edu":[252],"SUPPLEMENTARY":[253],"INFORMATION:":[254],"Supplementary":[255],"Bioinformatics":[260],"online.":[261]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":6},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":16},{"year":2018,"cited_by_count":4},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":4}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2016-06-24T00:00:00"}