{"id":"https://openalex.org/W2420141398","doi":"https://doi.org/10.1093/bioinformatics/btw257","title":"Finding correct protein\u2013protein docking models using ProQDock","display_name":"Finding correct protein\u2013protein docking models using ProQDock","publication_year":2016,"publication_date":"2016-06-11","ids":{"openalex":"https://openalex.org/W2420141398","doi":"https://doi.org/10.1093/bioinformatics/btw257","mag":"2420141398","pmid":"https://pubmed.ncbi.nlm.nih.gov/27307625"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btw257","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btw257","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/32/12/i262/17129993/btw257.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/32/12/i262/17129993/btw257.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5054921936","display_name":"Sankar Basu","orcid":"https://orcid.org/0000-0003-1393-1982"},"institutions":[{"id":"https://openalex.org/I102134673","display_name":"Link\u00f6ping University","ror":"https://ror.org/05ynxx418","country_code":"SE","type":"education","lineage":["https://openalex.org/I102134673"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Sankar Basu","raw_affiliation_strings":["Division of Bioinformatics, Department of Physics, Chemistry and Biology, Link\u00f6ping University, Link\u00f6ping SE-581 83, Sweden"],"affiliations":[{"raw_affiliation_string":"Division of Bioinformatics, Department of Physics, Chemistry and Biology, Link\u00f6ping University, Link\u00f6ping SE-581 83, Sweden","institution_ids":["https://openalex.org/I102134673"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5010890480","display_name":"Bj\u00f6rn Wallner","orcid":"https://orcid.org/0000-0002-3772-8279"},"institutions":[{"id":"https://openalex.org/I102134673","display_name":"Link\u00f6ping University","ror":"https://ror.org/05ynxx418","country_code":"SE","type":"education","lineage":["https://openalex.org/I102134673"]}],"countries":["SE"],"is_corresponding":true,"raw_author_name":"Bj\u00f6rn Wallner","raw_affiliation_strings":["Division of Bioinformatics, Department of Physics, Chemistry and Biology, Link\u00f6ping University, Link\u00f6ping SE-581 83, Sweden"],"affiliations":[{"raw_affiliation_string":"Division of Bioinformatics, Department of Physics, Chemistry and Biology, Link\u00f6ping University, Link\u00f6ping SE-581 83, Sweden","institution_ids":["https://openalex.org/I102134673"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5010890480"],"corresponding_institution_ids":["https://openalex.org/I102134673"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":3.307,"has_fulltext":true,"cited_by_count":62,"citation_normalized_percentile":{"value":0.92273232,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":96,"max":99},"biblio":{"volume":"32","issue":"12","first_page":"i262","last_page":"i270"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9926000237464905,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/docking","display_name":"Docking (animal)","score":0.7656378149986267},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6106022596359253},{"id":"https://openalex.org/keywords/macromolecular-docking","display_name":"Macromolecular docking","score":0.4864809215068817},{"id":"https://openalex.org/keywords/protein\u2013ligand-docking","display_name":"Protein\u2013ligand docking","score":0.4810529053211212},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.40668755769729614},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3481740355491638},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.3079320788383484},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.22539862990379333},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.1976807713508606},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.17836251854896545},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.16268664598464966},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.11896651983261108},{"id":"https://openalex.org/keywords/drug-discovery","display_name":"Drug discovery","score":0.11611565947532654},{"id":"https://openalex.org/keywords/virtual-screening","display_name":"Virtual screening","score":0.09281378984451294}],"concepts":[{"id":"https://openalex.org/C41685203","wikidata":"https://www.wikidata.org/wiki/Q1974042","display_name":"Docking (animal)","level":2,"score":0.7656378149986267},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6106022596359253},{"id":"https://openalex.org/C116887118","wikidata":"https://www.wikidata.org/wiki/Q836685","display_name":"Macromolecular docking","level":3,"score":0.4864809215068817},{"id":"https://openalex.org/C77319485","wikidata":"https://www.wikidata.org/wiki/Q7251520","display_name":"Protein\u2013ligand docking","level":4,"score":0.4810529053211212},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.40668755769729614},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3481740355491638},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.3079320788383484},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.22539862990379333},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.1976807713508606},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.17836251854896545},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.16268664598464966},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.11896651983261108},{"id":"https://openalex.org/C74187038","wikidata":"https://www.wikidata.org/wiki/Q1418791","display_name":"Drug discovery","level":2,"score":0.11611565947532654},{"id":"https://openalex.org/C103697762","wikidata":"https://www.wikidata.org/wiki/Q4112105","display_name":"Virtual screening","level":3,"score":0.09281378984451294},{"id":"https://openalex.org/C159110408","wikidata":"https://www.wikidata.org/wiki/Q121176","display_name":"Nursing","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1093/bioinformatics/btw257","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btw257","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/32/12/i262/17129993/btw257.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:27307625","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27307625","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:4908341","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4908341","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:DiVA.org:liu-130431","is_oa":true,"landing_page_url":"http://urn.kb.se/resolve?urn=urn:nbn:se:liu:diva-130431","pdf_url":null,"source":{"id":"https://openalex.org/S4306401559","display_name":"KTH Publication Database DiVA (KTH Royal Institute of Technology)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Article in journal"},{"id":"pmh:oai:open-archive.highwire.org:bioinfo:32/12/i262","is_oa":false,"landing_page_url":"http://bioinformatics.oxfordjournals.org/cgi/content/short/32/12/i262","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btw257","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btw257","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/32/12/i262/17129993/btw257.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320317161","display_name":"Swedish e-Science Research Centre","ror":"https://ror.org/01e59yk92"},{"id":"https://openalex.org/F4320322581","display_name":"Vetenskapsr\u00e5det","ror":"https://ror.org/03zttf063"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2420141398.pdf","grobid_xml":"https://content.openalex.org/works/W2420141398.grobid-xml"},"referenced_works_count":56,"referenced_works":["https://openalex.org/W1030883578","https://openalex.org/W1540550673","https://openalex.org/W1547701650","https://openalex.org/W1907442748","https://openalex.org/W1925045229","https://openalex.org/W1963915837","https://openalex.org/W1990641854","https://openalex.org/W2007258535","https://openalex.org/W2017226419","https://openalex.org/W2018410079","https://openalex.org/W2019691413","https://openalex.org/W2025120281","https://openalex.org/W2030154259","https://openalex.org/W2048643046","https://openalex.org/W2052083266","https://openalex.org/W2055043387","https://openalex.org/W2056034415","https://openalex.org/W2058653824","https://openalex.org/W2058931873","https://openalex.org/W2063831812","https://openalex.org/W2064407584","https://openalex.org/W2067596330","https://openalex.org/W2071704671","https://openalex.org/W2075770210","https://openalex.org/W2087485814","https://openalex.org/W2088602550","https://openalex.org/W2100025509","https://openalex.org/W2108921801","https://openalex.org/W2111387452","https://openalex.org/W2112320038","https://openalex.org/W2114194071","https://openalex.org/W2115339329","https://openalex.org/W2118503756","https://openalex.org/W2118795098","https://openalex.org/W2119206069","https://openalex.org/W2122199548","https://openalex.org/W2129454543","https://openalex.org/W2130479394","https://openalex.org/W2132625528","https://openalex.org/W2134990671","https://openalex.org/W2135428461","https://openalex.org/W2140522686","https://openalex.org/W2145793759","https://openalex.org/W2153731681","https://openalex.org/W2153983456","https://openalex.org/W2157991822","https://openalex.org/W2160868144","https://openalex.org/W2164231736","https://openalex.org/W2168321064","https://openalex.org/W2290412022","https://openalex.org/W2323927982","https://openalex.org/W2401188096","https://openalex.org/W2508425869","https://openalex.org/W2990342180","https://openalex.org/W4210309881","https://openalex.org/W6712728169"],"related_works":["https://openalex.org/W1489925612","https://openalex.org/W3011103292","https://openalex.org/W4400485740","https://openalex.org/W2533022751","https://openalex.org/W2064383522","https://openalex.org/W2862730334","https://openalex.org/W2553094381","https://openalex.org/W3187431608","https://openalex.org/W1974422922","https://openalex.org/W4309353019"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":10},{"year":2023,"cited_by_count":9},{"year":2022,"cited_by_count":7},{"year":2021,"cited_by_count":9},{"year":2020,"cited_by_count":5},{"year":2019,"cited_by_count":5},{"year":2018,"cited_by_count":5},{"year":2017,"cited_by_count":6},{"year":2016,"cited_by_count":3}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
