{"id":"https://openalex.org/W2410180444","doi":"https://doi.org/10.1093/bioinformatics/btw233","title":"CART\u2014a chemical annotation retrieval toolkit","display_name":"CART\u2014a chemical annotation retrieval toolkit","publication_year":2016,"publication_date":"2016-06-02","ids":{"openalex":"https://openalex.org/W2410180444","doi":"https://doi.org/10.1093/bioinformatics/btw233","mag":"2410180444","pmid":"https://pubmed.ncbi.nlm.nih.gov/27256313"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btw233","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btw233","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/32/18/2869/24406766/btw233.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/32/18/2869/24406766/btw233.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5057448128","display_name":"Samy Deghou","orcid":null},"institutions":[{"id":"https://openalex.org/I4210153543","display_name":"European Molecular Biology Laboratory","ror":"https://ror.org/050589e39","country_code":"DE","type":"government","lineage":["https://openalex.org/I4210138560","https://openalex.org/I4210153543"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Samy Deghou","raw_affiliation_strings":["1 Structural and Computational Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Structural and Computational Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany","institution_ids":["https://openalex.org/I4210153543"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031822697","display_name":"Georg Zeller","orcid":"https://orcid.org/0000-0003-1429-7485"},"institutions":[{"id":"https://openalex.org/I4210153543","display_name":"European Molecular Biology Laboratory","ror":"https://ror.org/050589e39","country_code":"DE","type":"government","lineage":["https://openalex.org/I4210138560","https://openalex.org/I4210153543"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Georg Zeller","raw_affiliation_strings":["1 Structural and Computational Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Structural and Computational Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany","institution_ids":["https://openalex.org/I4210153543"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086962442","display_name":"Murat Iskar","orcid":"https://orcid.org/0000-0001-8603-4313"},"institutions":[{"id":"https://openalex.org/I4210153543","display_name":"European Molecular Biology Laboratory","ror":"https://ror.org/050589e39","country_code":"DE","type":"government","lineage":["https://openalex.org/I4210138560","https://openalex.org/I4210153543"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Murat Iskar","raw_affiliation_strings":["1 Structural and Computational Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Structural and Computational Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany","institution_ids":["https://openalex.org/I4210153543"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016029262","display_name":"Marja Driessen","orcid":null},"institutions":[{"id":"https://openalex.org/I4210153543","display_name":"European Molecular Biology Laboratory","ror":"https://ror.org/050589e39","country_code":"DE","type":"government","lineage":["https://openalex.org/I4210138560","https://openalex.org/I4210153543"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Marja Driessen","raw_affiliation_strings":["1 Structural and Computational Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Structural and Computational Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany","institution_ids":["https://openalex.org/I4210153543"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111826085","display_name":"Mercedes Castillo","orcid":null},"institutions":[{"id":"https://openalex.org/I4210153543","display_name":"European Molecular Biology Laboratory","ror":"https://ror.org/050589e39","country_code":"DE","type":"government","lineage":["https://openalex.org/I4210138560","https://openalex.org/I4210153543"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Mercedes Castillo","raw_affiliation_strings":["1 Structural and Computational Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Structural and Computational Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany","institution_ids":["https://openalex.org/I4210153543"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002077696","display_name":"Vera van Noort","orcid":"https://orcid.org/0000-0002-8436-6602"},"institutions":[{"id":"https://openalex.org/I4210153543","display_name":"European Molecular Biology Laboratory","ror":"https://ror.org/050589e39","country_code":"DE","type":"government","lineage":["https://openalex.org/I4210138560","https://openalex.org/I4210153543"]},{"id":"https://openalex.org/I99464096","display_name":"KU Leuven","ror":"https://ror.org/05f950310","country_code":"BE","type":"education","lineage":["https://openalex.org/I99464096"]}],"countries":["BE","DE"],"is_corresponding":false,"raw_author_name":"Vera van Noort","raw_affiliation_strings":["1 Structural and Computational Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany","2 Centre of Microbial and Plant Genetics, KU Leuven, Leuven, Belgium"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Structural and Computational Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany","institution_ids":["https://openalex.org/I4210153543"]},{"raw_affiliation_string":"2 Centre of Microbial and Plant Genetics, KU Leuven, Leuven, Belgium","institution_ids":["https://openalex.org/I99464096"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5074309419","display_name":"Peer Bork","orcid":"https://orcid.org/0000-0002-2627-833X"},"institutions":[{"id":"https://openalex.org/I205582932","display_name":"Max Delbr\u00fcck Center","ror":"https://ror.org/04p5ggc03","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I205582932"]},{"id":"https://openalex.org/I223822909","display_name":"Heidelberg University","ror":"https://ror.org/038t36y30","country_code":"DE","type":"education","lineage":["https://openalex.org/I223822909"]},{"id":"https://openalex.org/I25974101","display_name":"University of W\u00fcrzburg","ror":"https://ror.org/00fbnyb24","country_code":"DE","type":"education","lineage":["https://openalex.org/I25974101"]},{"id":"https://openalex.org/I4210138560","display_name":"European Molecular Biology Laboratory","ror":"https://ror.org/03mstc592","country_code":"DE","type":"government","lineage":["https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I4210153543","display_name":"European Molecular Biology Laboratory","ror":"https://ror.org/050589e39","country_code":"DE","type":"government","lineage":["https://openalex.org/I4210138560","https://openalex.org/I4210153543"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Peer Bork","raw_affiliation_strings":["1 Structural and Computational Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany","3 Molecular Medicine Partnership Unit, University of Heidelberg and European Molecular Biology Laboratory, Heidelberg, Germany","4 Max Delbr\u00fcck Centre for Molecular Medicine, Berlin, Germany","5 Department of Bioinformatics, Biocenter, University of W\u00fcrzburg, W\u00fcrzburg, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Structural and Computational Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany","institution_ids":["https://openalex.org/I4210153543"]},{"raw_affiliation_string":"3 Molecular Medicine Partnership Unit, University of Heidelberg and European Molecular Biology Laboratory, Heidelberg, Germany","institution_ids":["https://openalex.org/I4210138560","https://openalex.org/I223822909"]},{"raw_affiliation_string":"4 Max Delbr\u00fcck Centre for Molecular Medicine, Berlin, Germany","institution_ids":["https://openalex.org/I205582932"]},{"raw_affiliation_string":"5 Department of Bioinformatics, Biocenter, University of W\u00fcrzburg, W\u00fcrzburg, Germany","institution_ids":["https://openalex.org/I25974101"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5074309419"],"corresponding_institution_ids":["https://openalex.org/I205582932","https://openalex.org/I223822909","https://openalex.org/I25974101","https://openalex.org/I4210138560","https://openalex.org/I4210153543"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":1.0535,"has_fulltext":true,"cited_by_count":14,"citation_normalized_percentile":{"value":0.79594582,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"32","issue":"18","first_page":"2869","last_page":"2871"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9805999994277954,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9805999994277954,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.005100000184029341,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.0027000000700354576,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.8478789925575256},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7269195914268494},{"id":"https://openalex.org/keywords/cart","display_name":"Cart","score":0.6132053136825562},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.5064376592636108},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.41320449113845825},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.34843379259109497},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.29019802808761597},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.21723437309265137},{"id":"https://openalex.org/keywords/geography","display_name":"Geography","score":0.06661257147789001}],"concepts":[{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.8478789925575256},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7269195914268494},{"id":"https://openalex.org/C2777275308","wikidata":"https://www.wikidata.org/wiki/Q234668","display_name":"Cart","level":2,"score":0.6132053136825562},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.5064376592636108},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.41320449113845825},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.34843379259109497},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.29019802808761597},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.21723437309265137},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.06661257147789001},{"id":"https://openalex.org/C166957645","wikidata":"https://www.wikidata.org/wiki/Q23498","display_name":"Archaeology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D001330","descriptor_name":"Electronic Data Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001330","descriptor_name":"Electronic Data Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001330","descriptor_name":"Electronic Data Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D066289","descriptor_name":"Data Curation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D066289","descriptor_name":"Data Curation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D066289","descriptor_name":"Data Curation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":8,"locations":[{"id":"doi:10.1093/bioinformatics/btw233","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btw233","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/32/18/2869/24406766/btw233.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:27256313","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27256313","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:edoc.mdc-berlin.de:15771","is_oa":false,"landing_page_url":"http://edoc.mdc-berlin.de/15771/2/15771suppl.docx","pdf_url":null,"source":{"id":"https://openalex.org/S4306400224","display_name":"MDC Repository (Max-Delbrueck-Center for Molecular Medicine)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I149899117","host_organization_name":"Max Planck Society","host_organization_lineage":["https://openalex.org/I149899117"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"","raw_type":"Article"},{"id":"pmh:oai:lirias2repo.kuleuven.be:123456789/543521","is_oa":true,"landing_page_url":"https://lirias.kuleuven.be/bitstream/123456789/543521/1/bioinformatics.btw233.full.pdf","pdf_url":null,"source":{"id":"https://openalex.org/S7407055369","display_name":"Lirias","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics, vol. 32 (18), Art.No. btw233, (2869-2871)","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:open-archive.highwire.org:bioinfo:32/18/2869","is_oa":false,"landing_page_url":"http://bioinformatics.oxfordjournals.org/cgi/content/short/32/18/2869","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"},{"id":"pmh:oai:openaccess.leidenuniv.nl:1887/72077","is_oa":false,"landing_page_url":"http://hdl.handle.net/1887/72077","pdf_url":null,"source":{"id":"https://openalex.org/S4306400850","display_name":"Leiden Repository (Leiden University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I121797337","host_organization_name":"Leiden University","host_organization_lineage":["https://openalex.org/I121797337"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"32","raw_type":"Article / Letter to editor"},{"id":"pmh:oai:pubmedcentral.nih.gov:5018367","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5018367","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:scholarlypublications.universiteitleiden.nl:item_2903085","is_oa":false,"landing_page_url":"https://hdl.handle.net/1887/72077","pdf_url":null,"source":{"id":"https://openalex.org/S4306400850","display_name":"Leiden Repository (Leiden University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I121797337","host_organization_name":"Leiden University","host_organization_lineage":["https://openalex.org/I121797337"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Article / Letter to editor"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btw233","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btw233","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/32/18/2869/24406766/btw233.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320321114","display_name":"Bundesministerium f\u00fcr Bildung und Forschung","ror":"https://ror.org/04pz7b180"},{"id":"https://openalex.org/F4320330124","display_name":"German Network for Bioinformatics Infrastructure","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2410180444.pdf","grobid_xml":"https://content.openalex.org/works/W2410180444.grobid-xml"},"referenced_works_count":13,"referenced_works":["https://openalex.org/W1975426150","https://openalex.org/W1978370150","https://openalex.org/W1992442866","https://openalex.org/W2018518196","https://openalex.org/W2096560421","https://openalex.org/W2100811683","https://openalex.org/W2105728643","https://openalex.org/W2127050796","https://openalex.org/W2127843879","https://openalex.org/W2136482257","https://openalex.org/W2145578524","https://openalex.org/W2158217645","https://openalex.org/W2179127114"],"related_works":["https://openalex.org/W3193909393","https://openalex.org/W4226229889","https://openalex.org/W2322350723","https://openalex.org/W2618011907","https://openalex.org/W2945144341","https://openalex.org/W2974098477","https://openalex.org/W4244679540","https://openalex.org/W2258783214","https://openalex.org/W2170053717","https://openalex.org/W2074968855"],"abstract_inverted_index":{"MOTIVATION:":[0],"Data":[1],"on":[2,102],"bioactivities":[3],"of":[4,25,43,70,99,115,131],"drug-like":[5],"chemicals":[6,116],"are":[7,169],"rapidly":[8],"accumulating":[9],"in":[10,18,111,120],"public":[11],"repositories,":[12],"creating":[13],"new":[14],"opportunities":[15],"for":[16],"research":[17],"computational":[19],"systems":[20],"pharmacology.":[21],"However,":[22],"integrative":[23,129],"analysis":[24,130],"these":[26,119],"data":[27,168],"sets":[28],"is":[29,139],"difficult":[30],"due":[31],"to":[32,78],"prevailing":[33],"ambiguity":[34],"between":[35,45],"chemical":[36,71,81,100,132],"names":[37,72],"and":[38,40,117,123,149],"identifiers":[39],"a":[41,56,62,74,96,142],"lack":[42],"cross-references":[44],"databases.":[46],"RESULTS:":[47],"To":[48],"address":[49],"this":[50,84],"challenge,":[51],"we":[52],"have":[53],"developed":[54],"CART,":[55],"Chemical":[57],"Annotation":[58],"Retrieval":[59],"Toolkit.":[60],"As":[61],"key":[63],"functionality,":[64],"it":[65],"matches":[66],"an":[67,150],"input":[68,113],"list":[69],"into":[73],"comprehensive":[75],"reference":[76],"space":[77],"assign":[79],"unambiguous":[80],"identifiers.":[82],"In":[83],"unified":[85],"space,":[86],"bioactivity":[87,133],"annotations":[88,109],"can":[89,107,155],"be":[90,157],"easily":[91],"retrieved":[92],"from":[93,159],"databases":[94],"covering":[95],"wide":[97],"variety":[98],"effects":[101],"biological":[103],"systems.":[104],"Subsequently,":[105],"CART":[106,138],"determine":[108],"enriched":[110],"the":[112,160],"set":[114],"display":[118],"tabular":[121],"format":[122],"interactive":[124],"network":[125],"visualizations,":[126],"thereby":[127],"facilitating":[128],"data.":[134],"AVAILABILITY":[135],"AND":[136],"IMPLEMENTATION:":[137],"available":[140,170],"as":[141],"Galaxy":[143],"web":[144,161],"service":[145],"(cart.embl.de).":[146],"Source":[147],"code":[148],"easy-to-install":[151],"command":[152],"line":[153],"tool":[154],"also":[156],"obtained":[158],"site.":[162],"CONTACT:":[163],"bork@embl.de":[164],"SUPPLEMENTARY":[165],"INFORMATION:":[166],"Supplementary":[167],"at":[171],"Bioinformatics":[172],"online.":[173]},"counts_by_year":[{"year":2024,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":7},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":2}],"updated_date":"2026-07-02T09:51:11.867554","created_date":"2025-10-10T00:00:00"}
