{"id":"https://openalex.org/W2322311743","doi":"https://doi.org/10.1093/bioinformatics/btw123","title":"SharpViSu: integrated analysis and segmentation of super-resolution microscopy data","display_name":"SharpViSu: integrated analysis and segmentation of super-resolution microscopy data","publication_year":2016,"publication_date":"2016-03-18","ids":{"openalex":"https://openalex.org/W2322311743","doi":"https://doi.org/10.1093/bioinformatics/btw123","mag":"2322311743","pmid":"https://pubmed.ncbi.nlm.nih.gov/27153691"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btw123","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btw123","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/32/14/2239/49020085/bioinformatics_32_14_2239.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/32/14/2239/49020085/bioinformatics_32_14_2239.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5026425711","display_name":"Leonid Andronov","orcid":"https://orcid.org/0000-0002-4213-5363"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I4210086872","display_name":"Institut de g\u00e9n\u00e9tique et de biologie mol\u00e9culaire et cellulaire","ror":"https://ror.org/0015ws592","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I154526488","https://openalex.org/I4210086872","https://openalex.org/I4210096427","https://openalex.org/I68947357"]},{"id":"https://openalex.org/I4387154045","display_name":"Integrated Structural Biology Grenoble","ror":"https://ror.org/03949e763","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I2738703131","https://openalex.org/I4387154045","https://openalex.org/I899635006"]},{"id":"https://openalex.org/I68947357","display_name":"Universit\u00e9 de Strasbourg","ror":"https://ror.org/00pg6eq24","country_code":"FR","type":"education","lineage":["https://openalex.org/I68947357"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Leonid Andronov","raw_affiliation_strings":["1 Centre for Integrative Biology (CBI), Department of Integrated Structural Biology, IGBMC (Institute of Genetics and of Molecular and Cellular Biology), Illkirch, France","2 Centre National de la Recherche Scientifique (CNRS) UMR 7104, Illkirch, France","3 Institut National de la Sant\u00e9 et de la Recherche M\u00e9dicale (INSERM) U964, Illkirch, France","4 Universit\u00e9 de Strasbourg, Strasbourg, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Centre for Integrative Biology (CBI), Department of Integrated Structural Biology, IGBMC (Institute of Genetics and of Molecular and Cellular Biology), Illkirch, France","institution_ids":["https://openalex.org/I4210086872","https://openalex.org/I4387154045"]},{"raw_affiliation_string":"2 Centre National de la Recherche Scientifique (CNRS) UMR 7104, Illkirch, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I4210086872"]},{"raw_affiliation_string":"3 Institut National de la Sant\u00e9 et de la Recherche M\u00e9dicale (INSERM) U964, Illkirch, France","institution_ids":["https://openalex.org/I154526488"]},{"raw_affiliation_string":"4 Universit\u00e9 de Strasbourg, Strasbourg, France","institution_ids":["https://openalex.org/I68947357"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049817659","display_name":"Yves Lutz","orcid":null},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I4210086872","display_name":"Institut de g\u00e9n\u00e9tique et de biologie mol\u00e9culaire et cellulaire","ror":"https://ror.org/0015ws592","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I154526488","https://openalex.org/I4210086872","https://openalex.org/I4210096427","https://openalex.org/I68947357"]},{"id":"https://openalex.org/I4387154045","display_name":"Integrated Structural Biology Grenoble","ror":"https://ror.org/03949e763","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I2738703131","https://openalex.org/I4387154045","https://openalex.org/I899635006"]},{"id":"https://openalex.org/I68947357","display_name":"Universit\u00e9 de Strasbourg","ror":"https://ror.org/00pg6eq24","country_code":"FR","type":"education","lineage":["https://openalex.org/I68947357"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Yves Lutz","raw_affiliation_strings":["1 Centre for Integrative Biology (CBI), Department of Integrated Structural Biology, IGBMC (Institute of Genetics and of Molecular and Cellular Biology), Illkirch, France","2 Centre National de la Recherche Scientifique (CNRS) UMR 7104, Illkirch, France","3 Institut National de la Sant\u00e9 et de la Recherche M\u00e9dicale (INSERM) U964, Illkirch, France","4 Universit\u00e9 de Strasbourg, Strasbourg, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Centre for Integrative Biology (CBI), Department of Integrated Structural Biology, IGBMC (Institute of Genetics and of Molecular and Cellular Biology), Illkirch, France","institution_ids":["https://openalex.org/I4210086872","https://openalex.org/I4387154045"]},{"raw_affiliation_string":"2 Centre National de la Recherche Scientifique (CNRS) UMR 7104, Illkirch, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I4210086872"]},{"raw_affiliation_string":"3 Institut National de la Sant\u00e9 et de la Recherche M\u00e9dicale (INSERM) U964, Illkirch, France","institution_ids":["https://openalex.org/I154526488"]},{"raw_affiliation_string":"4 Universit\u00e9 de Strasbourg, Strasbourg, France","institution_ids":["https://openalex.org/I68947357"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108918271","display_name":"Jean\u2010Luc Vonesch","orcid":null},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I4210086872","display_name":"Institut de g\u00e9n\u00e9tique et de biologie mol\u00e9culaire et cellulaire","ror":"https://ror.org/0015ws592","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I154526488","https://openalex.org/I4210086872","https://openalex.org/I4210096427","https://openalex.org/I68947357"]},{"id":"https://openalex.org/I4387154045","display_name":"Integrated Structural Biology Grenoble","ror":"https://ror.org/03949e763","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I2738703131","https://openalex.org/I4387154045","https://openalex.org/I899635006"]},{"id":"https://openalex.org/I68947357","display_name":"Universit\u00e9 de Strasbourg","ror":"https://ror.org/00pg6eq24","country_code":"FR","type":"education","lineage":["https://openalex.org/I68947357"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Jean-Luc Vonesch","raw_affiliation_strings":["1 Centre for Integrative Biology (CBI), Department of Integrated Structural Biology, IGBMC (Institute of Genetics and of Molecular and Cellular Biology), Illkirch, France","2 Centre National de la Recherche Scientifique (CNRS) UMR 7104, Illkirch, France","3 Institut National de la Sant\u00e9 et de la Recherche M\u00e9dicale (INSERM) U964, Illkirch, France","4 Universit\u00e9 de Strasbourg, Strasbourg, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Centre for Integrative Biology (CBI), Department of Integrated Structural Biology, IGBMC (Institute of Genetics and of Molecular and Cellular Biology), Illkirch, France","institution_ids":["https://openalex.org/I4210086872","https://openalex.org/I4387154045"]},{"raw_affiliation_string":"2 Centre National de la Recherche Scientifique (CNRS) UMR 7104, Illkirch, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I4210086872"]},{"raw_affiliation_string":"3 Institut National de la Sant\u00e9 et de la Recherche M\u00e9dicale (INSERM) U964, Illkirch, France","institution_ids":["https://openalex.org/I154526488"]},{"raw_affiliation_string":"4 Universit\u00e9 de Strasbourg, Strasbourg, France","institution_ids":["https://openalex.org/I68947357"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5066694236","display_name":"Bruno P. Klaholz","orcid":"https://orcid.org/0000-0001-8674-8674"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I4210086872","display_name":"Institut de g\u00e9n\u00e9tique et de biologie mol\u00e9culaire et cellulaire","ror":"https://ror.org/0015ws592","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I154526488","https://openalex.org/I4210086872","https://openalex.org/I4210096427","https://openalex.org/I68947357"]},{"id":"https://openalex.org/I4387154045","display_name":"Integrated Structural Biology Grenoble","ror":"https://ror.org/03949e763","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I2738703131","https://openalex.org/I4387154045","https://openalex.org/I899635006"]},{"id":"https://openalex.org/I68947357","display_name":"Universit\u00e9 de Strasbourg","ror":"https://ror.org/00pg6eq24","country_code":"FR","type":"education","lineage":["https://openalex.org/I68947357"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Bruno P. Klaholz","raw_affiliation_strings":["1 Centre for Integrative Biology (CBI), Department of Integrated Structural Biology, IGBMC (Institute of Genetics and of Molecular and Cellular Biology), Illkirch, France","2 Centre National de la Recherche Scientifique (CNRS) UMR 7104, Illkirch, France","3 Institut National de la Sant\u00e9 et de la Recherche M\u00e9dicale (INSERM) U964, Illkirch, France","4 Universit\u00e9 de Strasbourg, Strasbourg, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Centre for Integrative Biology (CBI), Department of Integrated Structural Biology, IGBMC (Institute of Genetics and of Molecular and Cellular Biology), Illkirch, France","institution_ids":["https://openalex.org/I4210086872","https://openalex.org/I4387154045"]},{"raw_affiliation_string":"2 Centre National de la Recherche Scientifique (CNRS) UMR 7104, Illkirch, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I4210086872"]},{"raw_affiliation_string":"3 Institut National de la Sant\u00e9 et de la Recherche M\u00e9dicale (INSERM) U964, Illkirch, France","institution_ids":["https://openalex.org/I154526488"]},{"raw_affiliation_string":"4 Universit\u00e9 de Strasbourg, Strasbourg, France","institution_ids":["https://openalex.org/I68947357"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5066694236"],"corresponding_institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I154526488","https://openalex.org/I4210086872","https://openalex.org/I4387154045","https://openalex.org/I68947357"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":7.3754,"has_fulltext":true,"cited_by_count":51,"citation_normalized_percentile":{"value":0.96385274,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"32","issue":"14","first_page":"2239","last_page":"2241"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10540","display_name":"Advanced Fluorescence Microscopy Techniques","score":0.7811999917030334,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10540","display_name":"Advanced Fluorescence Microscopy Techniques","score":0.7811999917030334,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10857","display_name":"Advanced Electron Microscopy Techniques and Applications","score":0.08259999752044678,"subfield":{"id":"https://openalex.org/subfields/1315","display_name":"Structural Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.0414000004529953,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8238063454627991},{"id":"https://openalex.org/keywords/source-code","display_name":"Source code","score":0.6913604140281677},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.6289145350456238},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.6037543416023254},{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.5939313173294067},{"id":"https://openalex.org/keywords/graphical-user-interface","display_name":"Graphical user interface","score":0.5457094311714172},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.5412579774856567},{"id":"https://openalex.org/keywords/voronoi-diagram","display_name":"Voronoi diagram","score":0.5366384983062744},{"id":"https://openalex.org/keywords/interface","display_name":"Interface (matter)","score":0.48564398288726807},{"id":"https://openalex.org/keywords/resolution","display_name":"Resolution (logic)","score":0.4574034512042999},{"id":"https://openalex.org/keywords/code","display_name":"Code (set theory)","score":0.4391586482524872},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.40172746777534485},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.3890613317489624},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.36962923407554626},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.32307136058807373},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.1284748613834381},{"id":"https://openalex.org/keywords/parallel-computing","display_name":"Parallel computing","score":0.10658290982246399},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.09267714619636536},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.08726420998573303}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8238063454627991},{"id":"https://openalex.org/C43126263","wikidata":"https://www.wikidata.org/wiki/Q128751","display_name":"Source code","level":2,"score":0.6913604140281677},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.6289145350456238},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.6037543416023254},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.5939313173294067},{"id":"https://openalex.org/C37789001","wikidata":"https://www.wikidata.org/wiki/Q782543","display_name":"Graphical user interface","level":2,"score":0.5457094311714172},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.5412579774856567},{"id":"https://openalex.org/C24881265","wikidata":"https://www.wikidata.org/wiki/Q757267","display_name":"Voronoi diagram","level":2,"score":0.5366384983062744},{"id":"https://openalex.org/C113843644","wikidata":"https://www.wikidata.org/wiki/Q901882","display_name":"Interface (matter)","level":4,"score":0.48564398288726807},{"id":"https://openalex.org/C138268822","wikidata":"https://www.wikidata.org/wiki/Q1051925","display_name":"Resolution (logic)","level":2,"score":0.4574034512042999},{"id":"https://openalex.org/C2776760102","wikidata":"https://www.wikidata.org/wiki/Q5139990","display_name":"Code (set theory)","level":3,"score":0.4391586482524872},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.40172746777534485},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.3890613317489624},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.36962923407554626},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.32307136058807373},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.1284748613834381},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.10658290982246399},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.09267714619636536},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.08726420998573303},{"id":"https://openalex.org/C129307140","wikidata":"https://www.wikidata.org/wiki/Q6795880","display_name":"Maximum bubble pressure method","level":3,"score":0.0},{"id":"https://openalex.org/C157915830","wikidata":"https://www.wikidata.org/wiki/Q2928001","display_name":"Bubble","level":2,"score":0.0},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008853","descriptor_name":"Microscopy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008853","descriptor_name":"Microscopy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008853","descriptor_name":"Microscopy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008853","descriptor_name":"Microscopy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1093/bioinformatics/btw123","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btw123","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/32/14/2239/49020085/bioinformatics_32_14_2239.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:27153691","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27153691","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:4937188","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4937188","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:HAL:hal-03686867v1","is_oa":false,"landing_page_url":"https://hal.science/hal-03686867","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics, 2016, 32 (14), pp.2239-41. &#x27E8;10.1093/bioinformatics/btw123&#x27E9;","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:open-archive.highwire.org:bioinfo:32/14/2239","is_oa":false,"landing_page_url":"http://bioinformatics.oxfordjournals.org/cgi/content/short/32/14/2239","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btw123","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btw123","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/32/14/2239/49020085/bioinformatics_32_14_2239.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Industry, innovation and infrastructure","score":0.4099999964237213,"id":"https://metadata.un.org/sdg/9"}],"awards":[{"id":"https://openalex.org/G1052072530","display_name":null,"funder_award_id":"ANR-10-INSB-05-01.","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G1669488153","display_name":null,"funder_award_id":"10-INSB-05-01","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G2247417377","display_name":null,"funder_award_id":"ANR- 10-INSB-05","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G502948375","display_name":null,"funder_award_id":"ANR-10- INSB-05","funder_id":"https://openalex.org/F4320327185","funder_display_name":"French Infrastructure for Integrated Structural Biology"},{"id":"https://openalex.org/G654663749","display_name":null,"funder_award_id":"ANR-10-INSB-0501","funder_id":"https://openalex.org/F4320327185","funder_display_name":"French Infrastructure for Integrated Structural Biology"},{"id":"https://openalex.org/G7237471465","display_name":null,"funder_award_id":"INSB-05","funder_id":"https://openalex.org/F4320327185","funder_display_name":"French Infrastructure for Integrated Structural Biology"},{"id":"https://openalex.org/G7240651115","display_name":null,"funder_award_id":"ANR-10","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"}],"funders":[{"id":"https://openalex.org/F4320309749","display_name":"Association pour la Recherche sur le Cancer","ror":"https://ror.org/0489qz649"},{"id":"https://openalex.org/F4320320883","display_name":"Agence Nationale de la Recherche","ror":"https://ror.org/00rbzpz17"},{"id":"https://openalex.org/F4320322892","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73"},{"id":"https://openalex.org/F4320323807","display_name":"Institut National Du Cancer","ror":"https://ror.org/03m8vkq32"},{"id":"https://openalex.org/F4320327185","display_name":"French Infrastructure for Integrated Structural Biology","ror":"https://ror.org/045sst074"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2322311743.pdf","grobid_xml":"https://content.openalex.org/works/W2322311743.grobid-xml"},"referenced_works_count":20,"referenced_works":["https://openalex.org/W1833667256","https://openalex.org/W1977783786","https://openalex.org/W1997904982","https://openalex.org/W2020982888","https://openalex.org/W2061422980","https://openalex.org/W2066521860","https://openalex.org/W2076115100","https://openalex.org/W2086470518","https://openalex.org/W2094040033","https://openalex.org/W2098066812","https://openalex.org/W2115084586","https://openalex.org/W2118555049","https://openalex.org/W2120504118","https://openalex.org/W2125505095","https://openalex.org/W2125767182","https://openalex.org/W2133475843","https://openalex.org/W2134396482","https://openalex.org/W2137753785","https://openalex.org/W2141083815","https://openalex.org/W2336592851"],"related_works":["https://openalex.org/W3020555194","https://openalex.org/W2793256277","https://openalex.org/W2348235448","https://openalex.org/W4360958759","https://openalex.org/W2116218375","https://openalex.org/W2389906634","https://openalex.org/W288156810","https://openalex.org/W176898926","https://openalex.org/W1562406979","https://openalex.org/W2624709009"],"abstract_inverted_index":{"UNLABELLED:":[0],"We":[1,88],"introduce":[2],"SharpViSu,":[3],"an":[4,22],"interactive":[5],"open-source":[6],"software":[7],"with":[8,79],"a":[9],"graphical":[10],"user":[11],"interface,":[12],"which":[13],"allows":[14],"performing":[15],"processing":[16],"steps":[17],"for":[18],"localization":[19,47,86],"data":[20,121],"in":[21,55],"integrated":[23],"manner.":[24],"This":[25],"includes":[26],"common":[27],"features":[28],"and":[29,52,71,95,109],"new":[30],"tools":[31],"such":[32],"as":[33,105,110],"correction":[34,39],"of":[35,46,50,59,91],"chromatic":[36],"aberrations,":[37],"drift":[38],"based":[40,67],"on":[41,68,93],"iterative":[42],"cross-correlation":[43],"calculations,":[44],"selection":[45],"events,":[48],"reconstruction":[49],"2D":[51],"3D":[53],"datasets":[54],"different":[56],"representations,":[57],"estimation":[58],"resolution":[60],"by":[61],"Fourier":[62],"ring":[63],"correlation,":[64],"clustering":[65],"analysis":[66],"Voronoi":[69],"diagrams":[70],"Ripley's":[72],"functions.":[73],"SharpViSu":[74,102],"is":[75,103],"optimized":[76],"to":[77],"work":[78],"eventlist":[80],"tables":[81],"exported":[82],"from":[83],"most":[84],"popular":[85],"software.":[87],"show":[89],"applications":[90],"these":[92],"single":[94],"double-labelled":[96],"super-resolution":[97],"data.":[98],"AVAILABILITY":[99],"AND":[100],"IMPLEMENTATION:":[101],"available":[104,123],"open":[106],"source":[107],"code":[108],"compiled":[111],"stand-alone":[112],"application":[113],"under":[114],"https://github.com/andronovl/SharpViSu":[115],"CONTACT:":[116],"klaholz@igbmc.fr":[117],"SUPPLEMENTARY":[118],"INFORMATION:":[119],"Supplementary":[120],"are":[122],"at":[124],"Bioinformatics":[125],"online.":[126]},"counts_by_year":[{"year":2026,"cited_by_count":4},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":5},{"year":2023,"cited_by_count":8},{"year":2022,"cited_by_count":9},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":4},{"year":2018,"cited_by_count":7},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":3}],"updated_date":"2026-08-11T07:18:39.950985","created_date":"2025-10-10T00:00:00"}
