{"id":"https://openalex.org/W2271071948","doi":"https://doi.org/10.1093/bioinformatics/btw054","title":"Characterization of clinical signs in the human interactome","display_name":"Characterization of clinical signs in the human interactome","publication_year":2016,"publication_date":"2016-02-09","ids":{"openalex":"https://openalex.org/W2271071948","doi":"https://doi.org/10.1093/bioinformatics/btw054","mag":"2271071948","pmid":"https://pubmed.ncbi.nlm.nih.gov/26861820"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btw054","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btw054","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5030602787","display_name":"M\u00f3nica Chagoyen","orcid":"https://orcid.org/0000-0001-6911-1591"},"institutions":[{"id":"https://openalex.org/I4210104776","display_name":"Centro Nacional de Biotecnolog\u00eda","ror":"https://ror.org/015w4v032","country_code":"ES","type":"facility","lineage":["https://openalex.org/I134820265","https://openalex.org/I4210104776"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Monica Chagoyen","raw_affiliation_strings":["Computational Systems Biology Group, National Centre for Biotechnology (CNB-CSIC), Darwin 3, Madrid 28049, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computational Systems Biology Group, National Centre for Biotechnology (CNB-CSIC), Darwin 3, Madrid 28049, Spain","institution_ids":["https://openalex.org/I4210104776"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5062274087","display_name":"Florencio Pazos","orcid":"https://orcid.org/0000-0002-2646-6226"},"institutions":[{"id":"https://openalex.org/I4210104776","display_name":"Centro Nacional de Biotecnolog\u00eda","ror":"https://ror.org/015w4v032","country_code":"ES","type":"facility","lineage":["https://openalex.org/I134820265","https://openalex.org/I4210104776"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Florencio Pazos","raw_affiliation_strings":["Computational Systems Biology Group, National Centre for Biotechnology (CNB-CSIC), Darwin 3, Madrid 28049, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computational Systems Biology Group, National Centre for Biotechnology (CNB-CSIC), Darwin 3, Madrid 28049, Spain","institution_ids":["https://openalex.org/I4210104776"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5030602787"],"corresponding_institution_ids":["https://openalex.org/I4210104776"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":1.0445,"has_fulltext":false,"cited_by_count":15,"citation_normalized_percentile":{"value":0.7776877,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"32","issue":"12","first_page":"1761","last_page":"1765"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.7416999936103821,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.7416999936103821,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10261","display_name":"Genetic Associations and Epidemiology","score":0.06369999796152115,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11642","display_name":"Genomics and Rare Diseases","score":0.03530000150203705,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/interactome","display_name":"Interactome","score":0.8126540184020996},{"id":"https://openalex.org/keywords/pathological","display_name":"Pathological","score":0.5278339982032776},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5005571842193604},{"id":"https://openalex.org/keywords/phenotype","display_name":"Phenotype","score":0.44278568029403687},{"id":"https://openalex.org/keywords/signs-and-symptoms","display_name":"Signs and symptoms","score":0.415607213973999},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.37972065806388855},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3559136986732483},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.3227273225784302},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.17173662781715393},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.14204177260398865},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.10525444149971008}],"concepts":[{"id":"https://openalex.org/C9760119","wikidata":"https://www.wikidata.org/wiki/Q841382","display_name":"Interactome","level":3,"score":0.8126540184020996},{"id":"https://openalex.org/C207886595","wikidata":"https://www.wikidata.org/wiki/Q1456138","display_name":"Pathological","level":2,"score":0.5278339982032776},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5005571842193604},{"id":"https://openalex.org/C127716648","wikidata":"https://www.wikidata.org/wiki/Q104053","display_name":"Phenotype","level":3,"score":0.44278568029403687},{"id":"https://openalex.org/C3018875020","wikidata":"https://www.wikidata.org/wiki/Q1441305","display_name":"Signs and symptoms","level":2,"score":0.415607213973999},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.37972065806388855},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3559136986732483},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.3227273225784302},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.17173662781715393},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.14204177260398865},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.10525444149971008},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btw054","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btw054","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:26861820","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26861820","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:open-archive.highwire.org:bioinfo:32/12/1761","is_oa":false,"landing_page_url":"http://bioinformatics.oxfordjournals.org/cgi/content/short/32/12/1761","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":17,"referenced_works":["https://openalex.org/W1967022927","https://openalex.org/W1970304238","https://openalex.org/W1993333521","https://openalex.org/W2005602379","https://openalex.org/W2006810478","https://openalex.org/W2014105414","https://openalex.org/W2041073071","https://openalex.org/W2056782561","https://openalex.org/W2095403534","https://openalex.org/W2119943416","https://openalex.org/W2137518425","https://openalex.org/W2144086069","https://openalex.org/W2149993971","https://openalex.org/W2151914315","https://openalex.org/W2154654747","https://openalex.org/W2170282111","https://openalex.org/W4235457527"],"related_works":["https://openalex.org/W4292634579","https://openalex.org/W2964314049","https://openalex.org/W2022326234","https://openalex.org/W4388694323","https://openalex.org/W3215098729","https://openalex.org/W1531941329","https://openalex.org/W4243081378","https://openalex.org/W2622356054","https://openalex.org/W2804670115","https://openalex.org/W1979330259"],"abstract_inverted_index":{"MOTIVATION:":[0],"Many":[1],"diseases":[2,38,84],"are":[3,47,95,141],"related":[4],"by":[5],"shared":[6],"associated":[7,81],"molecules":[8],"and":[9,13,133],"pathways,":[10],"exhibiting":[11],"comorbidities":[12],"common":[14],"phenotypes,":[15],"an":[16],"indication":[17],"of":[18,22,68,77,122],"the":[19,23,42,55,66,74,78,86,100,108,123],"continuous":[20],"nature":[21,76],"human":[24,87,124],"pathological":[25,60,125],"landscape.":[26],"Although":[27],"it":[28],"is":[29,33],"continuous,":[30],"this":[31],"landscape":[32],"always":[34],"partitioned":[35],"into":[36],"discrete":[37],"when":[39],"studied":[40],"at":[41,99,105,143],"molecular":[43,56,101],"level.":[44],"Clinical":[45],"signs":[46,80,94],"also":[48],"important":[49],"phenotypic":[50],"descriptors":[51],"that":[52,58,92],"can":[53,114],"reveal":[54],"mechanisms":[57],"underlie":[59],"states,":[61],"but":[62],"have":[63],"seldom":[64],"been":[65],"subject":[67],"systemic":[69],"research.":[70],"Here,":[71],"we":[72],"quantify":[73],"modular":[75],"clinical":[79,93],"with":[82,127],"genetic":[83],"in":[85],"interactome.":[88],"RESULTS:":[89],"We":[90],"found":[91],"reflected":[96],"as":[97,111,117],"modules":[98],"network":[102],"level,":[103],"to":[104,107],"least":[106],"same":[109],"extent":[110],"diseases.":[112],"They":[113],"thus":[115],"serve":[116],"a":[118],"valid":[119],"complementary":[120],"partition":[121],"landscape,":[126],"implications":[128],"for":[129],"etiology":[130],"research,":[131],"diagnosis":[132],"treatment.":[134],"CONTACT:":[135],"monica.chagoyen@cnb.csic.es":[136],"SUPPLEMENTARY":[137],"INFORMATION:":[138],"Supplementary":[139],"data":[140],"available":[142],"Bioinformatics":[144],"online.":[145]},"counts_by_year":[{"year":2024,"cited_by_count":5},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":3}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
