{"id":"https://openalex.org/W2187215566","doi":"https://doi.org/10.1093/bioinformatics/btv701","title":"rcellminer: exploring molecular profiles and drug response of the NCI-60 cell lines in R","display_name":"rcellminer: exploring molecular profiles and drug response of the NCI-60 cell lines in R","publication_year":2015,"publication_date":"2015-12-03","ids":{"openalex":"https://openalex.org/W2187215566","doi":"https://doi.org/10.1093/bioinformatics/btv701","mag":"2187215566","pmid":"https://pubmed.ncbi.nlm.nih.gov/26635141"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btv701","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btv701","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/32/8/1272/49018809/bioinformatics_32_8_1272.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","datacite","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/32/8/1272/49018809/bioinformatics_32_8_1272.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5026945351","display_name":"Augustin Luna","orcid":"https://orcid.org/0000-0001-5709-371X"},"institutions":[{"id":"https://openalex.org/I1334819555","display_name":"Memorial Sloan Kettering Cancer Center","ror":"https://ror.org/02yrq0923","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1334819555"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Augustin Luna","raw_affiliation_strings":["1 Computer Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY 10021, USA,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Computer Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY 10021, USA,","institution_ids":["https://openalex.org/I1334819555"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009108088","display_name":"Vinodh N. Rajapakse","orcid":"https://orcid.org/0000-0002-5214-1089"},"institutions":[{"id":"https://openalex.org/I4210149717","display_name":"Center for Cancer Research","ror":"https://ror.org/05bjen692","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210140884","https://openalex.org/I4210149717"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Vinodh N. Rajapakse","raw_affiliation_strings":["2 Developmental Therapeutic Branch, Center for Cancer Research, NCI, NIH, Bethesda, MD 20892, USA,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"2 Developmental Therapeutic Branch, Center for Cancer Research, NCI, NIH, Bethesda, MD 20892, USA,","institution_ids":["https://openalex.org/I4210149717"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056598316","display_name":"Fabr\u00edcio G. Sousa","orcid":"https://orcid.org/0000-0003-0444-754X"},"institutions":[{"id":"https://openalex.org/I122558511","display_name":"Universidade Federal de Mato Grosso do Sul","ror":"https://ror.org/0366d2847","country_code":"BR","type":"education","lineage":["https://openalex.org/I122558511"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Fabricio G. Sousa","raw_affiliation_strings":["3 Centro De Estudos Em C\u00e9lulas Tronco, Terapia Celular E Gen\u00e9tica Toxicol\u00f3gica, Programa De P\u00f3s-Gradua\u00e7\u00e3o Em Farm\u00e1cia, Universidade Federal De Mato Grosso Do Sul, Campo Grande, MS 79070-900, Brazil and"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"3 Centro De Estudos Em C\u00e9lulas Tronco, Terapia Celular E Gen\u00e9tica Toxicol\u00f3gica, Programa De P\u00f3s-Gradua\u00e7\u00e3o Em Farm\u00e1cia, Universidade Federal De Mato Grosso Do Sul, Campo Grande, MS 79070-900, Brazil and","institution_ids":["https://openalex.org/I122558511"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014978419","display_name":"Jianjiong Gao","orcid":"https://orcid.org/0000-0002-5739-1781"},"institutions":[{"id":"https://openalex.org/I1334819555","display_name":"Memorial Sloan Kettering Cancer Center","ror":"https://ror.org/02yrq0923","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1334819555"]},{"id":"https://openalex.org/I4210150208","display_name":"Molecular Oncology (United States)","ror":"https://ror.org/04rtkc841","country_code":"US","type":"company","lineage":["https://openalex.org/I4210150208"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jianjiong Gao","raw_affiliation_strings":["4 Center for Molecular Oncology, Memorial Sloan Kettering Cancer Center, New York, NY 10021, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"4 Center for Molecular Oncology, Memorial Sloan Kettering Cancer Center, New York, NY 10021, USA","institution_ids":["https://openalex.org/I1334819555","https://openalex.org/I4210150208"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033125884","display_name":"Nikolaus Schultz","orcid":"https://orcid.org/0000-0002-0131-4904"},"institutions":[{"id":"https://openalex.org/I1334819555","display_name":"Memorial Sloan Kettering Cancer Center","ror":"https://ror.org/02yrq0923","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1334819555"]},{"id":"https://openalex.org/I4210150208","display_name":"Molecular Oncology (United States)","ror":"https://ror.org/04rtkc841","country_code":"US","type":"company","lineage":["https://openalex.org/I4210150208"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Nikolaus Schultz","raw_affiliation_strings":["4 Center for Molecular Oncology, Memorial Sloan Kettering Cancer Center, New York, NY 10021, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"4 Center for Molecular Oncology, Memorial Sloan Kettering Cancer Center, New York, NY 10021, USA","institution_ids":["https://openalex.org/I1334819555","https://openalex.org/I4210150208"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004831674","display_name":"Sudhir Varma","orcid":"https://orcid.org/0000-0002-4096-4782"},"institutions":[{"id":"https://openalex.org/I4210149717","display_name":"Center for Cancer Research","ror":"https://ror.org/05bjen692","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210140884","https://openalex.org/I4210149717"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sudhir Varma","raw_affiliation_strings":["2 Developmental Therapeutic Branch, Center for Cancer Research, NCI, NIH, Bethesda, MD 20892, USA,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"2 Developmental Therapeutic Branch, Center for Cancer Research, NCI, NIH, Bethesda, MD 20892, USA,","institution_ids":["https://openalex.org/I4210149717"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069677416","display_name":"William C. Reinhold","orcid":"https://orcid.org/0000-0001-5513-9323"},"institutions":[{"id":"https://openalex.org/I4210149717","display_name":"Center for Cancer Research","ror":"https://ror.org/05bjen692","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210140884","https://openalex.org/I4210149717"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"William Reinhold","raw_affiliation_strings":["2 Developmental Therapeutic Branch, Center for Cancer Research, NCI, NIH, Bethesda, MD 20892, USA,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"2 Developmental Therapeutic Branch, Center for Cancer Research, NCI, NIH, Bethesda, MD 20892, USA,","institution_ids":["https://openalex.org/I4210149717"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008166270","display_name":"Chris Sander","orcid":"https://orcid.org/0000-0001-6059-6270"},"institutions":[{"id":"https://openalex.org/I1334819555","display_name":"Memorial Sloan Kettering Cancer Center","ror":"https://ror.org/02yrq0923","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1334819555"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Chris Sander","raw_affiliation_strings":["1 Computer Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY 10021, USA,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Computer Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY 10021, USA,","institution_ids":["https://openalex.org/I1334819555"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5042114293","display_name":"\ufeffYves Pommier","orcid":"https://orcid.org/0000-0002-3108-0758"},"institutions":[{"id":"https://openalex.org/I4210149717","display_name":"Center for Cancer Research","ror":"https://ror.org/05bjen692","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210140884","https://openalex.org/I4210149717"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yves Pommier","raw_affiliation_strings":["2 Developmental Therapeutic Branch, Center for Cancer Research, NCI, NIH, Bethesda, MD 20892, USA,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"2 Developmental Therapeutic Branch, Center for Cancer Research, NCI, NIH, Bethesda, MD 20892, USA,","institution_ids":["https://openalex.org/I4210149717"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":9,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":4.1246,"has_fulltext":true,"cited_by_count":48,"citation_normalized_percentile":{"value":0.94475144,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"32","issue":"8","first_page":"1272","last_page":"1274"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10528","display_name":"Adipokines, Inflammation, and Metabolic Diseases","score":0.1589999943971634,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10528","display_name":"Adipokines, Inflammation, and Metabolic Diseases","score":0.1589999943971634,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.1444000005722046,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11313","display_name":"Immune cells in cancer","score":0.0843999981880188,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/bioconductor","display_name":"Bioconductor","score":0.9709445238113403},{"id":"https://openalex.org/keywords/r-package","display_name":"R package","score":0.6259747743606567},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6199497580528259},{"id":"https://openalex.org/keywords/profiling","display_name":"Profiling (computer programming)","score":0.5637049674987793},{"id":"https://openalex.org/keywords/documentation","display_name":"Documentation","score":0.5257711410522461},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.49457165598869324},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.4414921700954437},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.26809942722320557},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.23960503935813904},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.23375743627548218},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.1596727967262268},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.10441341996192932}],"concepts":[{"id":"https://openalex.org/C2779694297","wikidata":"https://www.wikidata.org/wiki/Q2888953","display_name":"Bioconductor","level":3,"score":0.9709445238113403},{"id":"https://openalex.org/C2984074130","wikidata":"https://www.wikidata.org/wiki/Q73539779","display_name":"R package","level":2,"score":0.6259747743606567},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6199497580528259},{"id":"https://openalex.org/C187191949","wikidata":"https://www.wikidata.org/wiki/Q1138496","display_name":"Profiling (computer programming)","level":2,"score":0.5637049674987793},{"id":"https://openalex.org/C56666940","wikidata":"https://www.wikidata.org/wiki/Q788790","display_name":"Documentation","level":2,"score":0.5257711410522461},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.49457165598869324},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.4414921700954437},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.26809942722320557},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.23960503935813904},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.23375743627548218},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.1596727967262268},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.10441341996192932},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D002460","descriptor_name":"Cell Line","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002460","descriptor_name":"Cell Line","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002460","descriptor_name":"Cell Line","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":8,"locations":[{"id":"doi:10.1093/bioinformatics/btv701","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btv701","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/32/8/1272/49018809/bioinformatics_32_8_1272.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:26635141","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26635141","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:open-archive.highwire.org:bioinfo:32/8/1272","is_oa":false,"landing_page_url":"http://bioinformatics.oxfordjournals.org/cgi/content/short/32/8/1272","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"},{"id":"pmh:oai:pubmedcentral.nih.gov:4907377","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4907377","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"},{"id":"doi:10.5281/zenodo.14846167","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.14846167","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"dataset"},{"id":"doi:10.5281/zenodo.14846168","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.14846168","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"dataset"},{"id":"doi:10.5281/zenodo.15122311","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.15122311","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"dataset"},{"id":"doi:10.5281/zenodo.17088217","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.17088217","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"dataset"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btv701","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btv701","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/32/8/1272/49018809/bioinformatics_32_8_1272.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1406412383","display_name":null,"funder_award_id":"F32 CA192901","funder_id":"https://openalex.org/F4320337351","funder_display_name":"National Cancer Institute"},{"id":"https://openalex.org/G3142815064","display_name":null,"funder_award_id":"Z01 BC006150","funder_id":"https://openalex.org/F4320337351","funder_display_name":"National Cancer Institute"},{"id":"https://openalex.org/G5582352357","display_name":null,"funder_award_id":"U24 CA143840","funder_id":"https://openalex.org/F4320337351","funder_display_name":"National Cancer Institute"},{"id":"https://openalex.org/G5711250986","display_name":null,"funder_award_id":"CA143840","funder_id":"https://openalex.org/F4320337351","funder_display_name":"National Cancer Institute"},{"id":"https://openalex.org/G8195029442","display_name":null,"funder_award_id":"U24 CA143840","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320309468","display_name":"Memorial Sloan-Kettering Cancer Center","ror":"https://ror.org/02yrq0923"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337351","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2187215566.pdf","grobid_xml":"https://content.openalex.org/works/W2187215566.grobid-xml"},"referenced_works_count":11,"referenced_works":["https://openalex.org/W1862448690","https://openalex.org/W1991415686","https://openalex.org/W2004879789","https://openalex.org/W2038595016","https://openalex.org/W2075174106","https://openalex.org/W2099308584","https://openalex.org/W2103196126","https://openalex.org/W2114843025","https://openalex.org/W2122306898","https://openalex.org/W2125117729","https://openalex.org/W6669079525"],"related_works":["https://openalex.org/W2982252354","https://openalex.org/W2728564446","https://openalex.org/W3045904767","https://openalex.org/W2161868542","https://openalex.org/W2140163842","https://openalex.org/W3156537409","https://openalex.org/W2747931568","https://openalex.org/W2921090651","https://openalex.org/W2133055377","https://openalex.org/W2287365612"],"abstract_inverted_index":{"PURPOSE:":[0],"The":[1,27,110,136],"rcellminer":[2,95],"R":[3,13,85,99],"package":[4,28,137],"provides":[5],"a":[6],"wide":[7],"range":[8],"of":[9,37,64],"functionality":[10],"to":[11,33,72,127],"help":[12],"users":[14],"access":[15,32],"and":[16,20,42,66,79,101,108,114,140],"explore":[17],"molecular":[18,80],"profiling":[19],"drug":[21],"response":[22],"data":[23,54,90],"for":[24,55],"the":[25,128],"NCI-60.":[26],"enables":[29],"flexible":[30],"programmatic":[31],"CellMiner's":[34],"unparalleled":[35],"breadth":[36],"NCI-60":[38],"data,":[39],"including":[40],"gene":[41],"protein":[43],"expression,":[44],"copy":[45],"number,":[46],"whole":[47],"exome":[48],"mutations,":[49],"as":[50,52],"well":[51],"activity":[53,77],"\u223c21K":[56],"compounds,":[57],"with":[58,98,132],"information":[59],"on":[60,103],"their":[61],"structure,":[62],"mechanism":[63],"action":[65],"repeat":[67],"screens.":[68],"Functions":[69],"are":[70,117],"available":[71,118],"easily":[73],"visualize":[74],"compound":[75],"structures,":[76],"patterns":[78],"feature":[81],"profiles.":[82],"Additionally,":[83],"embedded":[84],"Shiny":[86],"applications":[87,116],"allow":[88],"interactive":[89],"exploration.":[91],"AVAILABILITY":[92],"AND":[93],"IMPLEMENTATION:":[94],"is":[96,138],"compatible":[97],"3.2":[100],"above":[102],"Windows,":[104],"Mac":[105],"OS":[106],"X":[107],"Linux.":[109],"package,":[111],"documentation,":[112],"tutorials":[113],"Shiny-based":[115],"through":[119],"Bioconductor":[120,129],"(http://www.bioconductor.org/packages/rcellminer);":[121],"ongoing":[122],"updates":[123],"will":[124],"occur":[125],"according":[126],"release":[130],"schedule":[131],"new":[133],"CellMiner":[134],"data.":[135],"free":[139],"open-source":[141],"(LGPL":[142],"3).":[143],"CONTACT:":[144],"lunaa@cbio.mskcc.org":[145],"or":[146],"vinodh.rajapakse@nih.gov.":[147]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":6},{"year":2020,"cited_by_count":6},{"year":2019,"cited_by_count":6},{"year":2018,"cited_by_count":9},{"year":2017,"cited_by_count":5},{"year":2016,"cited_by_count":5}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2016-06-24T00:00:00"}
