{"id":"https://openalex.org/W2153954238","doi":"https://doi.org/10.1093/bioinformatics/btv453","title":"MEPSA: minimum energy pathway analysis for energy landscapes","display_name":"MEPSA: minimum energy pathway analysis for energy landscapes","publication_year":2015,"publication_date":"2015-07-31","ids":{"openalex":"https://openalex.org/W2153954238","doi":"https://doi.org/10.1093/bioinformatics/btv453","mag":"2153954238","pmid":"https://pubmed.ncbi.nlm.nih.gov/26231428"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btv453","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btv453","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/31/23/3853/49036302/bioinformatics_31_23_3853.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/31/23/3853/49036302/bioinformatics_31_23_3853.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5027614212","display_name":"\u00cd\u00f1igo Marcos\u2010Alcalde","orcid":"https://orcid.org/0000-0002-0674-6423"},"institutions":[{"id":"https://openalex.org/I4210146061","display_name":"Centro de Biolog\u00eda Molecular Severo Ochoa","ror":"https://ror.org/03v9e8t09","country_code":"ES","type":"facility","lineage":["https://openalex.org/I134820265","https://openalex.org/I4210146061"]},{"id":"https://openalex.org/I63634437","display_name":"Universidad Aut\u00f3noma de Madrid","ror":"https://ror.org/01cby8j38","country_code":"ES","type":"education","lineage":["https://openalex.org/I63634437"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"I\u00f1igo Marcos-Alcalde","raw_affiliation_strings":["1 Molecular Modelling Group, CBMSO (CSIC-UAM), ES-28049 Madrid, Spain,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Molecular Modelling Group, CBMSO (CSIC-UAM), ES-28049 Madrid, Spain,","institution_ids":["https://openalex.org/I4210146061","https://openalex.org/I63634437"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047597929","display_name":"Javier Setoa\u00edn","orcid":"https://orcid.org/0000-0002-9701-2352"},"institutions":[{"id":"https://openalex.org/I4210125392","display_name":"Centre for Automation and Robotics","ror":"https://ror.org/02wh02235","country_code":"ES","type":"facility","lineage":["https://openalex.org/I134820265","https://openalex.org/I4210125392","https://openalex.org/I88060688"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Javier Setoain","raw_affiliation_strings":["2 Departamento de Arquitectura de Computadores y Autom\u00e1tica, UCM, ES-28040 Madrid, Spain,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"2 Departamento de Arquitectura de Computadores y Autom\u00e1tica, UCM, ES-28040 Madrid, Spain,","institution_ids":["https://openalex.org/I4210125392"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050638310","display_name":"Jes\u00fas I. Mendieta\u2010Moreno","orcid":"https://orcid.org/0000-0001-8530-3315"},"institutions":[{"id":"https://openalex.org/I4210146061","display_name":"Centro de Biolog\u00eda Molecular Severo Ochoa","ror":"https://ror.org/03v9e8t09","country_code":"ES","type":"facility","lineage":["https://openalex.org/I134820265","https://openalex.org/I4210146061"]},{"id":"https://openalex.org/I63634437","display_name":"Universidad Aut\u00f3noma de Madrid","ror":"https://ror.org/01cby8j38","country_code":"ES","type":"education","lineage":["https://openalex.org/I63634437"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Jes\u00fas I. Mendieta-Moreno","raw_affiliation_strings":["1 Molecular Modelling Group, CBMSO (CSIC-UAM), ES-28049 Madrid, Spain,","3 Departamento de F\u00edsica Te\u00f3rica de la Materia Condensada and Condensed Matter Physics Center (IFIMAC), UAM and"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Molecular Modelling Group, CBMSO (CSIC-UAM), ES-28049 Madrid, Spain,","institution_ids":["https://openalex.org/I4210146061","https://openalex.org/I63634437"]},{"raw_affiliation_string":"3 Departamento de F\u00edsica Te\u00f3rica de la Materia Condensada and Condensed Matter Physics Center (IFIMAC), UAM and","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084350139","display_name":"Jes\u00fas Mendieta","orcid":"https://orcid.org/0000-0001-9286-2166"},"institutions":[{"id":"https://openalex.org/I4210146061","display_name":"Centro de Biolog\u00eda Molecular Severo Ochoa","ror":"https://ror.org/03v9e8t09","country_code":"ES","type":"facility","lineage":["https://openalex.org/I134820265","https://openalex.org/I4210146061"]},{"id":"https://openalex.org/I4210160766","display_name":"Biomol Informatics (Spain)","ror":"https://ror.org/057rd1163","country_code":"ES","type":"company","lineage":["https://openalex.org/I4210160766"]},{"id":"https://openalex.org/I63634437","display_name":"Universidad Aut\u00f3noma de Madrid","ror":"https://ror.org/01cby8j38","country_code":"ES","type":"education","lineage":["https://openalex.org/I63634437"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Jes\u00fas Mendieta","raw_affiliation_strings":["1 Molecular Modelling Group, CBMSO (CSIC-UAM), ES-28049 Madrid, Spain,","4 Biomol-Informatics SL, Campus UAM, ES-28049 Madrid, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Molecular Modelling Group, CBMSO (CSIC-UAM), ES-28049 Madrid, Spain,","institution_ids":["https://openalex.org/I4210146061","https://openalex.org/I63634437"]},{"raw_affiliation_string":"4 Biomol-Informatics SL, Campus UAM, ES-28049 Madrid, Spain","institution_ids":["https://openalex.org/I4210160766","https://openalex.org/I63634437"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5061201501","display_name":"Paulino G\u00f3mez\u2010Puertas","orcid":"https://orcid.org/0000-0003-3131-729X"},"institutions":[{"id":"https://openalex.org/I4210146061","display_name":"Centro de Biolog\u00eda Molecular Severo Ochoa","ror":"https://ror.org/03v9e8t09","country_code":"ES","type":"facility","lineage":["https://openalex.org/I134820265","https://openalex.org/I4210146061"]},{"id":"https://openalex.org/I63634437","display_name":"Universidad Aut\u00f3noma de Madrid","ror":"https://ror.org/01cby8j38","country_code":"ES","type":"education","lineage":["https://openalex.org/I63634437"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Paulino G\u00f3mez-Puertas","raw_affiliation_strings":["1 Molecular Modelling Group, CBMSO (CSIC-UAM), ES-28049 Madrid, Spain,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Molecular Modelling Group, CBMSO (CSIC-UAM), ES-28049 Madrid, Spain,","institution_ids":["https://openalex.org/I4210146061","https://openalex.org/I63634437"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5061201501"],"corresponding_institution_ids":["https://openalex.org/I4210146061","https://openalex.org/I63634437"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":1.6527,"has_fulltext":true,"cited_by_count":154,"citation_normalized_percentile":{"value":0.83763453,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":100},"biblio":{"volume":"31","issue":"23","first_page":"3853","last_page":"3855"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.879800021648407,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.879800021648407,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.025800000876188278,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11948","display_name":"Machine Learning in Materials Science","score":0.010200000368058681,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/maxima-and-minima","display_name":"Maxima and minima","score":0.9211225509643555},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6714714169502258},{"id":"https://openalex.org/keywords/path","display_name":"Path (computing)","score":0.6179549098014832},{"id":"https://openalex.org/keywords/energy-landscape","display_name":"Energy landscape","score":0.6162150502204895},{"id":"https://openalex.org/keywords/energy","display_name":"Energy (signal processing)","score":0.5655513405799866},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.5578561425209045},{"id":"https://openalex.org/keywords/license","display_name":"License","score":0.520578920841217},{"id":"https://openalex.org/keywords/potential-energy-surface","display_name":"Potential energy surface","score":0.4929053783416748},{"id":"https://openalex.org/keywords/potential-energy","display_name":"Potential energy","score":0.4839484989643097},{"id":"https://openalex.org/keywords/state","display_name":"State (computer science)","score":0.42737898230552673},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4057510793209076},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.3670358657836914},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.35157495737075806},{"id":"https://openalex.org/keywords/biological-system","display_name":"Biological system","score":0.3317907452583313},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.18335959315299988},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.13506248593330383}],"concepts":[{"id":"https://openalex.org/C186633575","wikidata":"https://www.wikidata.org/wiki/Q845060","display_name":"Maxima and minima","level":2,"score":0.9211225509643555},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6714714169502258},{"id":"https://openalex.org/C2777735758","wikidata":"https://www.wikidata.org/wiki/Q817765","display_name":"Path (computing)","level":2,"score":0.6179549098014832},{"id":"https://openalex.org/C119621388","wikidata":"https://www.wikidata.org/wiki/Q5377166","display_name":"Energy landscape","level":2,"score":0.6162150502204895},{"id":"https://openalex.org/C186370098","wikidata":"https://www.wikidata.org/wiki/Q442787","display_name":"Energy (signal processing)","level":2,"score":0.5655513405799866},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5578561425209045},{"id":"https://openalex.org/C2780560020","wikidata":"https://www.wikidata.org/wiki/Q79719","display_name":"License","level":2,"score":0.520578920841217},{"id":"https://openalex.org/C125277925","wikidata":"https://www.wikidata.org/wiki/Q2572687","display_name":"Potential energy surface","level":3,"score":0.4929053783416748},{"id":"https://openalex.org/C84551667","wikidata":"https://www.wikidata.org/wiki/Q155640","display_name":"Potential energy","level":2,"score":0.4839484989643097},{"id":"https://openalex.org/C48103436","wikidata":"https://www.wikidata.org/wiki/Q599031","display_name":"State (computer science)","level":2,"score":0.42737898230552673},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4057510793209076},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.3670358657836914},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.35157495737075806},{"id":"https://openalex.org/C186060115","wikidata":"https://www.wikidata.org/wiki/Q30336093","display_name":"Biological system","level":1,"score":0.3317907452583313},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.18335959315299988},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.13506248593330383},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C97355855","wikidata":"https://www.wikidata.org/wiki/Q11473","display_name":"Thermodynamics","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C2781442258","wikidata":"https://www.wikidata.org/wiki/Q46310","display_name":"Ab initio","level":2,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D008968","descriptor_name":"Molecular Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008968","descriptor_name":"Molecular Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008968","descriptor_name":"Molecular Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btv453","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btv453","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/31/23/3853/49036302/bioinformatics_31_23_3853.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:26231428","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26231428","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:digital.csic.es:10261/139912","is_oa":true,"landing_page_url":"http://hdl.handle.net/10261/139912","pdf_url":"http://hdl.handle.net/10261/139912","source":{"id":"https://openalex.org/S4306400616","display_name":"DIGITAL.CSIC (Spanish National Research Council (CSIC))","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I134820265","host_organization_name":"Consejo Superior de Investigaciones Cient\u00edficas","host_organization_lineage":["https://openalex.org/I134820265"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Art\u00edculo"},{"id":"pmh:oai:open-archive.highwire.org:bioinfo:31/23/3853","is_oa":false,"landing_page_url":"http://bioinformatics.oxfordjournals.org/cgi/content/short/31/23/3853","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btv453","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btv453","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/31/23/3853/49036302/bioinformatics_31_23_3853.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.8799999952316284,"display_name":"Affordable and clean energy","id":"https://metadata.un.org/sdg/7"}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W2153954238.pdf"},"referenced_works_count":9,"referenced_works":["https://openalex.org/W2006283486","https://openalex.org/W2011301426","https://openalex.org/W2036108598","https://openalex.org/W2085235576","https://openalex.org/W2109102515","https://openalex.org/W2146292423","https://openalex.org/W2169528473","https://openalex.org/W2332804029","https://openalex.org/W2404561520"],"related_works":["https://openalex.org/W1976300900","https://openalex.org/W2998096374","https://openalex.org/W2124175595","https://openalex.org/W2080690496","https://openalex.org/W2135538908","https://openalex.org/W4320932432","https://openalex.org/W2090433880","https://openalex.org/W2095139726","https://openalex.org/W567738051","https://openalex.org/W2259524780"],"abstract_inverted_index":{"UNLABELLED:":[0],"From":[1],"conformational":[2],"studies":[3],"to":[4,18,111],"atomistic":[5],"descriptions":[6],"of":[7,29,57,67,74,80,86,91,101,120,133,140],"enzymatic":[8],"reactions,":[9],"potential":[10],"and":[11,78,99],"free":[12],"energy":[13,32,58,94],"landscapes":[14,59],"can":[15,34,117],"be":[16,36],"used":[17],"describe":[19],"biomolecular":[20],"systems":[21],"in":[22],"detail.":[23],"However,":[24],"extracting":[25],"the":[26,55,76,81,92,121,138],"relevant":[27,70],"data":[28,123,165],"complex":[30],"3D":[31],"surfaces":[33],"sometimes":[35],"laborious.":[37],"In":[38,109],"this":[39],"article,":[40],"we":[41],"present":[42],"MEPSA":[43,116,151],"(Minimum":[44],"Energy":[45],"Path":[46],"Surface":[47],"Analysis),":[48],"a":[49,61,112,145],"cross-platform":[50],"user":[51],"friendly":[52],"tool":[53],"for":[54],"analysis":[56],"from":[60,144],"transition":[62,102],"state":[63,103],"theory":[64,104],"perspective.":[65],"Some":[66],"its":[68],"most":[69,119],"features":[71],"are:":[72],"identification":[73],"all":[75],"barriers":[77],"minima":[79,98],"landscape":[82],"at":[83,168],"once,":[84],"description":[85],"maxima":[87],"edge":[88],"profiles,":[89],"detection":[90],"lowest":[93],"path":[95],"connecting":[96],"two":[97],"generation":[100,139],"diagrams":[105],"along":[106],"these":[107],"paths.":[108],"addition":[110],"built-in":[113],"plotting":[114],"system,":[115],"save":[118],"generated":[122],"into":[124],"easily":[125],"parseable":[126],"text":[127],"files,":[128],"allowing":[129],"more":[130],"versatile":[131],"uses":[132],"MEPSA's":[134],"output":[135],"such":[136],"as":[137],"molecular":[141],"dynamics":[142],"restraints":[143],"calculated":[146],"path.":[147],"AVAILABILITY":[148],"AND":[149],"IMPLEMENTATION:":[150],"is":[152],"freely":[153],"available":[154,167],"(under":[155],"GPLv3":[156],"license)":[157],"at:":[158],"http://bioweb.cbm.uam.es/software/MEPSA/":[159],"CONTACT:":[160],"pagomez@cbm.csic.es.":[161],"SUPPLEMENTARY":[162],"INFORMATION:":[163],"Supplementary":[164],"are":[166],"Bioinformatics":[169],"online.":[170]},"counts_by_year":[{"year":2026,"cited_by_count":9},{"year":2025,"cited_by_count":27},{"year":2024,"cited_by_count":27},{"year":2023,"cited_by_count":16},{"year":2022,"cited_by_count":20},{"year":2021,"cited_by_count":16},{"year":2020,"cited_by_count":13},{"year":2019,"cited_by_count":14},{"year":2018,"cited_by_count":8},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":2}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}