{"id":"https://openalex.org/W2104189207","doi":"https://doi.org/10.1093/bioinformatics/btv362","title":"IBS: an illustrator for the presentation and visualization of biological sequences","display_name":"IBS: an illustrator for the presentation and visualization of biological sequences","publication_year":2015,"publication_date":"2015-06-10","ids":{"openalex":"https://openalex.org/W2104189207","doi":"https://doi.org/10.1093/bioinformatics/btv362","mag":"2104189207","pmid":"https://pubmed.ncbi.nlm.nih.gov/26069263"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btv362","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btv362","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/31/20/3359/49036073/bioinformatics_31_20_3359.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/31/20/3359/49036073/bioinformatics_31_20_3359.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5041366828","display_name":"Wenzhong Liu","orcid":"https://orcid.org/0000-0003-3670-3915"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I170215575","display_name":"National University of Defense Technology","ror":"https://ror.org/05d2yfz11","country_code":"CN","type":"education","lineage":["https://openalex.org/I170215575"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wenzhong Liu","raw_affiliation_strings":["1 State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, Guangzhou, Guangdong 510275, China,","2 Collaborative Innovation Center of High Performance Computing, National University of Defense Technology, Changsha 410073, China,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, Guangzhou, Guangdong 510275, China,","institution_ids":["https://openalex.org/I157773358"]},{"raw_affiliation_string":"2 Collaborative Innovation Center of High Performance Computing, National University of Defense Technology, Changsha 410073, China,","institution_ids":["https://openalex.org/I170215575"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032071728","display_name":"Yubin Xie","orcid":"https://orcid.org/0000-0002-3566-4849"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yubin Xie","raw_affiliation_strings":["1 State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, Guangzhou, Guangdong 510275, China,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, Guangzhou, Guangdong 510275, China,","institution_ids":["https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111587108","display_name":"Jiyong Ma","orcid":"https://orcid.org/0009-0002-5547-2630"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jiyong Ma","raw_affiliation_strings":["1 State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, Guangzhou, Guangdong 510275, China,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, Guangzhou, Guangdong 510275, China,","institution_ids":["https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5114608848","display_name":"Xiaotong Luo","orcid":"https://orcid.org/0000-0002-7367-9910"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaotong Luo","raw_affiliation_strings":["1 State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, Guangzhou, Guangdong 510275, China,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, Guangzhou, Guangdong 510275, China,","institution_ids":["https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101447008","display_name":"Peng Nie","orcid":"https://orcid.org/0000-0003-3223-0284"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Peng Nie","raw_affiliation_strings":["1 State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, Guangzhou, Guangdong 510275, China,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, Guangzhou, Guangdong 510275, China,","institution_ids":["https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090129059","display_name":"Zhixiang Zuo","orcid":"https://orcid.org/0000-0002-2492-2689"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4210146711","display_name":"Sun Yat-sen University Cancer Center","ror":"https://ror.org/0400g8r85","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210146711"]},{"id":"https://openalex.org/I4391768007","display_name":"State Key Laboratory of Oncology in South China","ror":"https://ror.org/04dn2ax39","country_code":null,"type":"facility","lineage":["https://openalex.org/I157773358","https://openalex.org/I4391768007"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhixiang Zuo","raw_affiliation_strings":["3 Sun Yat-sen University Cancer Center, State Key Laboratory of Oncology in South China, Collaborative Innovation Center for Cancer Medicine, Guangzhou 510060, China,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"3 Sun Yat-sen University Cancer Center, State Key Laboratory of Oncology in South China, Collaborative Innovation Center for Cancer Medicine, Guangzhou 510060, China,","institution_ids":["https://openalex.org/I157773358","https://openalex.org/I4210146711","https://openalex.org/I4391768007"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049788844","display_name":"Urs Lahrmann","orcid":"https://orcid.org/0000-0002-8028-8053"},"institutions":[{"id":"https://openalex.org/I4210111966","display_name":"Fraunhofer Institute for Toxicology and Experimental Medicine","ror":"https://ror.org/02byjcr11","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4210111966","https://openalex.org/I4923324"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Urs Lahrmann","raw_affiliation_strings":["4 Fraunhofer Institute for Toxicology and Experimental Medicine, Project Group Personalized Tumor Therapy, 93053 Regensburg, Germany and"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"4 Fraunhofer Institute for Toxicology and Experimental Medicine, Project Group Personalized Tumor Therapy, 93053 Regensburg, Germany and","institution_ids":["https://openalex.org/I4210111966"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055435419","display_name":"Qi Zhao","orcid":"https://orcid.org/0000-0002-8683-6145"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qi Zhao","raw_affiliation_strings":["1 State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, Guangzhou, Guangdong 510275, China,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, Guangzhou, Guangdong 510275, China,","institution_ids":["https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038807158","display_name":"Yueyuan Zheng","orcid":"https://orcid.org/0000-0002-5692-8903"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yueyuan Zheng","raw_affiliation_strings":["1 State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, Guangzhou, Guangdong 510275, China,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, Guangzhou, Guangdong 510275, China,","institution_ids":["https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071440898","display_name":"Yong Zhao","orcid":"https://orcid.org/0000-0001-5068-2212"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yong Zhao","raw_affiliation_strings":["1 State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, Guangzhou, Guangdong 510275, China,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, Guangzhou, Guangdong 510275, China,","institution_ids":["https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052691524","display_name":"Yu Xue","orcid":"https://orcid.org/0000-0002-9403-6869"},"institutions":[{"id":"https://openalex.org/I47720641","display_name":"Huazhong University of Science and Technology","ror":"https://ror.org/00p991c53","country_code":"CN","type":"education","lineage":["https://openalex.org/I47720641"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Yu Xue","raw_affiliation_strings":["5 Department of Biomedical Engineering, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan 430074, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"5 Department of Biomedical Engineering, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan 430074, China","institution_ids":["https://openalex.org/I47720641"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5079092787","display_name":"Jian Ren","orcid":"https://orcid.org/0000-0002-4161-1292"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I170215575","display_name":"National University of Defense Technology","ror":"https://ror.org/05d2yfz11","country_code":"CN","type":"education","lineage":["https://openalex.org/I170215575"]},{"id":"https://openalex.org/I4210146711","display_name":"Sun Yat-sen University Cancer Center","ror":"https://ror.org/0400g8r85","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210146711"]},{"id":"https://openalex.org/I4391768007","display_name":"State Key Laboratory of Oncology in South China","ror":"https://ror.org/04dn2ax39","country_code":null,"type":"facility","lineage":["https://openalex.org/I157773358","https://openalex.org/I4391768007"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Jian Ren","raw_affiliation_strings":["1 State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, Guangzhou, Guangdong 510275, China,","2 Collaborative Innovation Center of High Performance Computing, National University of Defense Technology, Changsha 410073, China,","3 Sun Yat-sen University Cancer Center, State Key Laboratory of Oncology in South China, Collaborative Innovation Center for Cancer Medicine, Guangzhou 510060, China,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, Guangzhou, Guangdong 510275, China,","institution_ids":["https://openalex.org/I157773358"]},{"raw_affiliation_string":"2 Collaborative Innovation Center of High Performance Computing, National University of Defense Technology, Changsha 410073, China,","institution_ids":["https://openalex.org/I170215575"]},{"raw_affiliation_string":"3 Sun Yat-sen University Cancer Center, State Key Laboratory of Oncology in South China, Collaborative Innovation Center for Cancer Medicine, Guangzhou 510060, China,","institution_ids":["https://openalex.org/I157773358","https://openalex.org/I4210146711","https://openalex.org/I4391768007"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":12,"corresponding_author_ids":["https://openalex.org/A5052691524","https://openalex.org/A5079092787"],"corresponding_institution_ids":["https://openalex.org/I157773358","https://openalex.org/I170215575","https://openalex.org/I4210146711","https://openalex.org/I4391768007","https://openalex.org/I47720641"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":26.8086,"has_fulltext":false,"cited_by_count":1084,"citation_normalized_percentile":{"value":0.99785192,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":96,"max":100},"biblio":{"volume":"31","issue":"20","first_page":"3359","last_page":"3361"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.13950000703334808,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.13950000703334808,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.10450000315904617,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.09510000050067902,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7651643753051758},{"id":"https://openalex.org/keywords/javascript","display_name":"JavaScript","score":0.6737449169158936},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.6672124862670898},{"id":"https://openalex.org/keywords/automatic-summarization","display_name":"Automatic summarization","score":0.6507742404937744},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.5155556201934814},{"id":"https://openalex.org/keywords/presentation","display_name":"Presentation (obstetrics)","score":0.45853883028030396},{"id":"https://openalex.org/keywords/biological-data","display_name":"Biological data","score":0.43394845724105835},{"id":"https://openalex.org/keywords/scalable-vector-graphics","display_name":"Scalable Vector Graphics","score":0.4299318492412567},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.37918102741241455},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3313536047935486},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.30515778064727783},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.2762046456336975},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.2575162947177887},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.14375105500221252}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7651643753051758},{"id":"https://openalex.org/C544833334","wikidata":"https://www.wikidata.org/wiki/Q2005","display_name":"JavaScript","level":2,"score":0.6737449169158936},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.6672124862670898},{"id":"https://openalex.org/C170858558","wikidata":"https://www.wikidata.org/wiki/Q1394144","display_name":"Automatic summarization","level":2,"score":0.6507742404937744},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5155556201934814},{"id":"https://openalex.org/C2777601897","wikidata":"https://www.wikidata.org/wiki/Q3409113","display_name":"Presentation (obstetrics)","level":2,"score":0.45853883028030396},{"id":"https://openalex.org/C201797286","wikidata":"https://www.wikidata.org/wiki/Q4914986","display_name":"Biological data","level":2,"score":0.43394845724105835},{"id":"https://openalex.org/C202629362","wikidata":"https://www.wikidata.org/wiki/Q2078","display_name":"Scalable Vector Graphics","level":2,"score":0.4299318492412567},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.37918102741241455},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3313536047935486},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.30515778064727783},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.2762046456336975},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.2575162947177887},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.14375105500221252},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0},{"id":"https://openalex.org/C126838900","wikidata":"https://www.wikidata.org/wiki/Q77604","display_name":"Radiology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1093/bioinformatics/btv362","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btv362","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/31/20/3359/49036073/bioinformatics_31_20_3359.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:26069263","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26069263","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:europepmc.org:3576054","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4595897","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:open-archive.highwire.org:bioinfo:31/20/3359","is_oa":false,"landing_page_url":"http://bioinformatics.oxfordjournals.org/cgi/content/short/31/20/3359","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"},{"id":"pmh:oai:publica.fraunhofer.de:publica/241334","is_oa":false,"landing_page_url":"https://publica.fraunhofer.de/handle/publica/241334","pdf_url":null,"source":{"id":"https://openalex.org/S4306400318","display_name":"Fraunhofer-Publica (Fraunhofer-Gesellschaft)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4923324","host_organization_name":"Fraunhofer-Gesellschaft","host_organization_lineage":["https://openalex.org/I4923324"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"journal article"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btv362","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btv362","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/31/20/3359/49036073/bioinformatics_31_20_3359.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":5,"referenced_works":["https://openalex.org/W1974884489","https://openalex.org/W1979880724","https://openalex.org/W2107158607","https://openalex.org/W2114763268","https://openalex.org/W4211192322"],"related_works":["https://openalex.org/W2358969090","https://openalex.org/W3183425535","https://openalex.org/W2354624479","https://openalex.org/W2394137533","https://openalex.org/W2362190996","https://openalex.org/W2385461408","https://openalex.org/W2366403280","https://openalex.org/W2119089902","https://openalex.org/W2387643967","https://openalex.org/W2268687088"],"abstract_inverted_index":{"UNLABELLED:":[0],"Biological":[1],"sequence":[2],"diagrams":[3],"are":[4,68,127,140],"fundamental":[5],"for":[6,49],"visualizing":[7],"various":[8],"functional":[9],"elements":[10],"in":[11,59,70,81,108,116],"protein":[12,55],"or":[13,56,79,134],"nucleotide":[14,57],"sequences":[15,43,58,74],"that":[16,45],"enable":[17],"a":[18,36,60,82,95],"summarization":[19],"and":[20,63,72,118,124],"presentation":[21],"of":[22,29,41,53,104],"existing":[23],"information":[24],"as":[25,27],"well":[26],"means":[28],"intuitive":[30],"new":[31],"discoveries.":[32],"Here,":[33],"we":[34],"present":[35],"software":[37],"package":[38,103,123],"called":[39],"illustrator":[40],"biological":[42,73],"(IBS)":[44],"can":[46,75,90],"be":[47,76,91],"used":[48],"representing":[50],"the":[51,86,111,121],"organization":[52],"either":[54],"convenient,":[61],"efficient":[62],"precise":[64],"manner.":[65],"Multiple":[66],"options":[67],"provided":[69],"IBS,":[71],"manipulated,":[77],"recolored":[78],"rescaled":[80],"user-defined":[83],"mode.":[84],"Also,":[85],"final":[87],"representational":[88],"artwork":[89],"directly":[92],"exported":[93],"into":[94],"publication-quality":[96],"figure.":[97],"AVAILABILITY":[98],"AND":[99],"IMPLEMENTATION:":[100],"The":[101],"standalone":[102,122],"IBS":[105],"was":[106,114],"implemented":[107,115],"JAVA,":[109],"while":[110],"online":[112,125],"service":[113,126],"HTML5":[117],"JavaScript.":[119],"Both":[120],"freely":[128],"available":[129,141],"at":[130,142],"http://ibs.biocuckoo.org.":[131],"CONTACT:":[132],"renjian.sysu@gmail.com":[133],"xueyu@hust.edu.cn":[135],"SUPPLEMENTARY":[136],"INFORMATION:":[137],"Supplementary":[138],"data":[139],"Bioinformatics":[143],"online.":[144]},"counts_by_year":[{"year":2026,"cited_by_count":26},{"year":2025,"cited_by_count":65},{"year":2024,"cited_by_count":127},{"year":2023,"cited_by_count":138},{"year":2022,"cited_by_count":167},{"year":2021,"cited_by_count":169},{"year":2020,"cited_by_count":133},{"year":2019,"cited_by_count":82},{"year":2018,"cited_by_count":94},{"year":2017,"cited_by_count":44},{"year":2016,"cited_by_count":36},{"year":2015,"cited_by_count":3}],"updated_date":"2026-06-19T17:40:00.097472","created_date":"2025-10-10T00:00:00"}
