{"id":"https://openalex.org/W2115191145","doi":"https://doi.org/10.1093/bioinformatics/btu853","title":"ENViz: a Cytoscape App for integrated statistical analysis and visualization of sample-matched data with multiple data types","display_name":"ENViz: a Cytoscape App for integrated statistical analysis and visualization of sample-matched data with multiple data types","publication_year":2015,"publication_date":"2015-01-09","ids":{"openalex":"https://openalex.org/W2115191145","doi":"https://doi.org/10.1093/bioinformatics/btu853","mag":"2115191145","pmid":"https://pubmed.ncbi.nlm.nih.gov/25577435"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btu853","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btu853","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/31/10/1683/422140/btu853.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/31/10/1683/422140/btu853.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5086399308","display_name":"Israel Steinfeld","orcid":null},"institutions":[{"id":"https://openalex.org/I138285227","display_name":"Agilent Technologies (United States)","ror":"https://ror.org/02tryst02","country_code":"US","type":"company","lineage":["https://openalex.org/I138285227"]},{"id":"https://openalex.org/I174306211","display_name":"Technion \u2013 Israel Institute of Technology","ror":"https://ror.org/03qryx823","country_code":"IL","type":"education","lineage":["https://openalex.org/I174306211"]}],"countries":["IL","US"],"is_corresponding":true,"raw_author_name":"Israel Steinfeld","raw_affiliation_strings":["1 Agilent Laboratories, Tel-Aviv, Israel, 2Technion \u2013 Israel Institute of Technology, Haifa, Israel, 3Blue Oak Software and 4Agilent Laboratories, Santa Clara, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Agilent Laboratories, Tel-Aviv, Israel, 2Technion \u2013 Israel Institute of Technology, Haifa, Israel, 3Blue Oak Software and 4Agilent Laboratories, Santa Clara, CA, USA","institution_ids":["https://openalex.org/I138285227","https://openalex.org/I174306211"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019735460","display_name":"Roy Navon","orcid":"https://orcid.org/0000-0001-7738-6915"},"institutions":[{"id":"https://openalex.org/I138285227","display_name":"Agilent Technologies (United States)","ror":"https://ror.org/02tryst02","country_code":"US","type":"company","lineage":["https://openalex.org/I138285227"]},{"id":"https://openalex.org/I174306211","display_name":"Technion \u2013 Israel Institute of Technology","ror":"https://ror.org/03qryx823","country_code":"IL","type":"education","lineage":["https://openalex.org/I174306211"]}],"countries":["IL","US"],"is_corresponding":false,"raw_author_name":"Roy Navon","raw_affiliation_strings":["1 Agilent Laboratories, Tel-Aviv, Israel, 2Technion \u2013 Israel Institute of Technology, Haifa, Israel, 3Blue Oak Software and 4Agilent Laboratories, Santa Clara, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Agilent Laboratories, Tel-Aviv, Israel, 2Technion \u2013 Israel Institute of Technology, Haifa, Israel, 3Blue Oak Software and 4Agilent Laboratories, Santa Clara, CA, USA","institution_ids":["https://openalex.org/I138285227","https://openalex.org/I174306211"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028096822","display_name":"Michael Creech","orcid":null},"institutions":[{"id":"https://openalex.org/I138285227","display_name":"Agilent Technologies (United States)","ror":"https://ror.org/02tryst02","country_code":"US","type":"company","lineage":["https://openalex.org/I138285227"]},{"id":"https://openalex.org/I174306211","display_name":"Technion \u2013 Israel Institute of Technology","ror":"https://ror.org/03qryx823","country_code":"IL","type":"education","lineage":["https://openalex.org/I174306211"]}],"countries":["IL","US"],"is_corresponding":false,"raw_author_name":"Michael L. Creech","raw_affiliation_strings":["1 Agilent Laboratories, Tel-Aviv, Israel, 2Technion \u2013 Israel Institute of Technology, Haifa, Israel, 3Blue Oak Software and 4Agilent Laboratories, Santa Clara, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Agilent Laboratories, Tel-Aviv, Israel, 2Technion \u2013 Israel Institute of Technology, Haifa, Israel, 3Blue Oak Software and 4Agilent Laboratories, Santa Clara, CA, USA","institution_ids":["https://openalex.org/I138285227","https://openalex.org/I174306211"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002511176","display_name":"Zohar Yakhini","orcid":"https://orcid.org/0000-0002-0420-5412"},"institutions":[{"id":"https://openalex.org/I138285227","display_name":"Agilent Technologies (United States)","ror":"https://ror.org/02tryst02","country_code":"US","type":"company","lineage":["https://openalex.org/I138285227"]},{"id":"https://openalex.org/I174306211","display_name":"Technion \u2013 Israel Institute of Technology","ror":"https://ror.org/03qryx823","country_code":"IL","type":"education","lineage":["https://openalex.org/I174306211"]}],"countries":["IL","US"],"is_corresponding":false,"raw_author_name":"Zohar Yakhini","raw_affiliation_strings":["1 Agilent Laboratories, Tel-Aviv, Israel, 2Technion \u2013 Israel Institute of Technology, Haifa, Israel, 3Blue Oak Software and 4Agilent Laboratories, Santa Clara, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Agilent Laboratories, Tel-Aviv, Israel, 2Technion \u2013 Israel Institute of Technology, Haifa, Israel, 3Blue Oak Software and 4Agilent Laboratories, Santa Clara, CA, USA","institution_ids":["https://openalex.org/I138285227","https://openalex.org/I174306211"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5090319393","display_name":"Anya Tsalenko","orcid":null},"institutions":[{"id":"https://openalex.org/I138285227","display_name":"Agilent Technologies (United States)","ror":"https://ror.org/02tryst02","country_code":"US","type":"company","lineage":["https://openalex.org/I138285227"]},{"id":"https://openalex.org/I174306211","display_name":"Technion \u2013 Israel Institute of Technology","ror":"https://ror.org/03qryx823","country_code":"IL","type":"education","lineage":["https://openalex.org/I174306211"]}],"countries":["IL","US"],"is_corresponding":false,"raw_author_name":"Anya Tsalenko","raw_affiliation_strings":["1 Agilent Laboratories, Tel-Aviv, Israel, 2Technion \u2013 Israel Institute of Technology, Haifa, Israel, 3Blue Oak Software and 4Agilent Laboratories, Santa Clara, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Agilent Laboratories, Tel-Aviv, Israel, 2Technion \u2013 Israel Institute of Technology, Haifa, Israel, 3Blue Oak Software and 4Agilent Laboratories, Santa Clara, CA, USA","institution_ids":["https://openalex.org/I138285227","https://openalex.org/I174306211"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5086399308"],"corresponding_institution_ids":["https://openalex.org/I138285227","https://openalex.org/I174306211"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":1.054,"has_fulltext":false,"cited_by_count":17,"citation_normalized_percentile":{"value":0.76842268,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"31","issue":"10","first_page":"1683","last_page":"1685"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9868000149726868,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.664677619934082},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.640214204788208},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.632042646408081},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.599250853061676},{"id":"https://openalex.org/keywords/sample","display_name":"Sample (material)","score":0.5123335123062134},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.4997408390045166},{"id":"https://openalex.org/keywords/app-store","display_name":"App store","score":0.44830596446990967},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.4461918771266937},{"id":"https://openalex.org/keywords/data-set","display_name":"Data set","score":0.4266887605190277},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.42380639910697937},{"id":"https://openalex.org/keywords/data-visualization","display_name":"Data visualization","score":0.4173818826675415},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.2971663177013397},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.15367749333381653},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.09391558170318604}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.664677619934082},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.640214204788208},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.632042646408081},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.599250853061676},{"id":"https://openalex.org/C198531522","wikidata":"https://www.wikidata.org/wiki/Q485146","display_name":"Sample (material)","level":2,"score":0.5123335123062134},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.4997408390045166},{"id":"https://openalex.org/C2779794324","wikidata":"https://www.wikidata.org/wiki/Q3814081","display_name":"App store","level":2,"score":0.44830596446990967},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.4461918771266937},{"id":"https://openalex.org/C58489278","wikidata":"https://www.wikidata.org/wiki/Q1172284","display_name":"Data set","level":2,"score":0.4266887605190277},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.42380639910697937},{"id":"https://openalex.org/C172367668","wikidata":"https://www.wikidata.org/wiki/Q6504956","display_name":"Data visualization","level":3,"score":0.4173818826675415},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.2971663177013397},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.15367749333381653},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.09391558170318604},{"id":"https://openalex.org/C43617362","wikidata":"https://www.wikidata.org/wiki/Q170050","display_name":"Chromatography","level":1,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D002453","descriptor_name":"Cell Cycle","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002453","descriptor_name":"Cell Cycle","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002453","descriptor_name":"Cell Cycle","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003627","descriptor_name":"Data Interpretation, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003627","descriptor_name":"Data Interpretation, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003627","descriptor_name":"Data Interpretation, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btu853","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btu853","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/31/10/1683/422140/btu853.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:25577435","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25577435","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:open-archive.highwire.org:bioinfo:31/10/1683","is_oa":false,"landing_page_url":"http://bioinformatics.oxfordjournals.org/cgi/content/short/31/10/1683","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"},{"id":"pmh:oai:pubmedcentral.nih.gov:4426829","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4426829","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btu853","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btu853","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/31/10/1683/422140/btu853.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being","score":0.5}],"awards":[],"funders":[{"id":"https://openalex.org/F4320327317","display_name":"Kom op tegen Kanker","ror":null}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":9,"referenced_works":["https://openalex.org/W1981093360","https://openalex.org/W1982191152","https://openalex.org/W2038963685","https://openalex.org/W2040676413","https://openalex.org/W2097453652","https://openalex.org/W2100519678","https://openalex.org/W2103017472","https://openalex.org/W2137531873","https://openalex.org/W2152026276"],"related_works":["https://openalex.org/W4225274103","https://openalex.org/W2013728941","https://openalex.org/W2154046714","https://openalex.org/W2579659702","https://openalex.org/W2189613078","https://openalex.org/W1574055964","https://openalex.org/W2923661510","https://openalex.org/W2542318691","https://openalex.org/W2547096368","https://openalex.org/W2586219255"],"abstract_inverted_index":{"Abstract":[0],"Summary:":[1],"ENViz":[2,116],"(Enrichment":[3],"Analysis":[4],"and":[5,114],"Visualization)":[6],"is":[7,50,117],"a":[8],"Cytoscape":[9,111,122],"app":[10],"that":[11],"performs":[12],"joint":[13],"enrichment":[14,48,104],"analysis":[15,49,71,105],"of":[16,19,26,45,55,64,69,73,79,81,102],"two":[17],"types":[18],"sample":[20],"matched":[21],"datasets":[22,30,83],"in":[23,41,52,96,120],"the":[24,42,53,65,70,82,85,93,103,121,131],"context":[25,54],"systematic":[27],"annotations.":[28],"Such":[29],"may":[31],"be":[32],"gene":[33,58],"expression":[34],"or":[35,60],"any":[36,61],"other":[37],"high-throughput":[38],"data":[39],"collected":[40],"same":[43],"set":[44],"samples.":[46],"The":[47,67,100],"done":[51],"pathway":[56],"information,":[57],"ontology":[59],"custom":[62],"annotation":[63,86],"data.":[66],"results":[68,101],"consist":[72],"significant":[74],"associations":[75],"between":[76],"profiled":[77],"elements":[78],"one":[80],"to":[84,92],"terms":[87],"(e.g.":[88],"miR-19":[89],"was":[90],"associated":[91],"cell-cycle":[94],"process":[95],"breast":[97],"cancer":[98],"samples).":[99],"are":[106],"visualized":[107],"as":[108],"an":[109],"interactive":[110],"network.":[112],"Availability":[113],"implementation:":[115],"publically":[118],"available":[119],"App":[123],"Store":[124],"(http://apps.cytoscape.org/apps/enviz).":[125],"For":[126],"additional":[127],"information":[128],"please":[129],"visit":[130],"tool":[132],"website:":[133],"http://www.agilent.com/labs/research/compbio/enviz/":[134],"Contact:":[135],"israel_steinfeld@agilent.com":[136]},"counts_by_year":[{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":5},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":4},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":1}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
