{"id":"https://openalex.org/W2156350407","doi":"https://doi.org/10.1093/bioinformatics/btu836","title":"CDvist: a webserver for identification and visualization of conserved domains in protein sequences","display_name":"CDvist: a webserver for identification and visualization of conserved domains in protein sequences","publication_year":2014,"publication_date":"2014-12-18","ids":{"openalex":"https://openalex.org/W2156350407","doi":"https://doi.org/10.1093/bioinformatics/btu836","mag":"2156350407","pmid":"https://pubmed.ncbi.nlm.nih.gov/25527097"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btu836","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btu836","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/31/9/1475/50306534/bioinformatics_31_9_1475.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/31/9/1475/50306534/bioinformatics_31_9_1475.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5036514234","display_name":"Og\u00fcn Adebal\u0131","orcid":"https://orcid.org/0000-0001-9213-4070"},"institutions":[{"id":"https://openalex.org/I1289243028","display_name":"Oak Ridge National Laboratory","ror":"https://ror.org/01qz5mb56","country_code":"US","type":"facility","lineage":["https://openalex.org/I1289243028","https://openalex.org/I1330989302","https://openalex.org/I39565521","https://openalex.org/I4210159294"]},{"id":"https://openalex.org/I75027704","display_name":"University of Tennessee at Knoxville","ror":"https://ror.org/020f3ap87","country_code":"US","type":"education","lineage":["https://openalex.org/I75027704"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Ogun Adebali","raw_affiliation_strings":["1 Computer Science and Mathematics Division, Oak Ridge National Laboratory, Oak Ridge, TN 37861, USA and 2Department of Microbiology, University of Tennessee, Knoxville, TN 37996, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Computer Science and Mathematics Division, Oak Ridge National Laboratory, Oak Ridge, TN 37861, USA and 2Department of Microbiology, University of Tennessee, Knoxville, TN 37996, USA","institution_ids":["https://openalex.org/I1289243028","https://openalex.org/I75027704"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033083642","display_name":"Davi R. Ortega","orcid":"https://orcid.org/0000-0002-8344-2335"},"institutions":[{"id":"https://openalex.org/I1289243028","display_name":"Oak Ridge National Laboratory","ror":"https://ror.org/01qz5mb56","country_code":"US","type":"facility","lineage":["https://openalex.org/I1289243028","https://openalex.org/I1330989302","https://openalex.org/I39565521","https://openalex.org/I4210159294"]},{"id":"https://openalex.org/I75027704","display_name":"University of Tennessee at Knoxville","ror":"https://ror.org/020f3ap87","country_code":"US","type":"education","lineage":["https://openalex.org/I75027704"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Davi R. Ortega","raw_affiliation_strings":["1 Computer Science and Mathematics Division, Oak Ridge National Laboratory, Oak Ridge, TN 37861, USA and 2Department of Microbiology, University of Tennessee, Knoxville, TN 37996, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Computer Science and Mathematics Division, Oak Ridge National Laboratory, Oak Ridge, TN 37861, USA and 2Department of Microbiology, University of Tennessee, Knoxville, TN 37996, USA","institution_ids":["https://openalex.org/I1289243028","https://openalex.org/I75027704"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5008234669","display_name":"Igor B. Zhulin","orcid":"https://orcid.org/0000-0002-6708-5323"},"institutions":[{"id":"https://openalex.org/I1289243028","display_name":"Oak Ridge National Laboratory","ror":"https://ror.org/01qz5mb56","country_code":"US","type":"facility","lineage":["https://openalex.org/I1289243028","https://openalex.org/I1330989302","https://openalex.org/I39565521","https://openalex.org/I4210159294"]},{"id":"https://openalex.org/I75027704","display_name":"University of Tennessee at Knoxville","ror":"https://ror.org/020f3ap87","country_code":"US","type":"education","lineage":["https://openalex.org/I75027704"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Igor B. Zhulin","raw_affiliation_strings":["1 Computer Science and Mathematics Division, Oak Ridge National Laboratory, Oak Ridge, TN 37861, USA and 2Department of Microbiology, University of Tennessee, Knoxville, TN 37996, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Computer Science and Mathematics Division, Oak Ridge National Laboratory, Oak Ridge, TN 37861, USA and 2Department of Microbiology, University of Tennessee, Knoxville, TN 37996, USA","institution_ids":["https://openalex.org/I1289243028","https://openalex.org/I75027704"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5008234669","https://openalex.org/A5036514234"],"corresponding_institution_ids":["https://openalex.org/I1289243028","https://openalex.org/I75027704"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":1.9543,"has_fulltext":true,"cited_by_count":80,"citation_normalized_percentile":{"value":0.86433264,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"31","issue":"9","first_page":"1475","last_page":"1477"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.16429999470710754,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.16429999470710754,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.15320000052452087,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.13369999825954437,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8261303901672363},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.8087935447692871},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.7043138742446899},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.6466659307479858},{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.5671620965003967},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.5065118074417114},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.47249332070350647},{"id":"https://openalex.org/keywords/web-application","display_name":"Web application","score":0.46703147888183594},{"id":"https://openalex.org/keywords/protein-domain","display_name":"Protein domain","score":0.4380512237548828},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.40641582012176514},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.22480493783950806},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.19756191968917847},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.12877827882766724},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.12095591425895691}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8261303901672363},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.8087935447692871},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.7043138742446899},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.6466659307479858},{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.5671620965003967},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.5065118074417114},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.47249332070350647},{"id":"https://openalex.org/C118643609","wikidata":"https://www.wikidata.org/wiki/Q189210","display_name":"Web application","level":2,"score":0.46703147888183594},{"id":"https://openalex.org/C144292202","wikidata":"https://www.wikidata.org/wiki/Q898273","display_name":"Protein domain","level":3,"score":0.4380512237548828},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.40641582012176514},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.22480493783950806},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.19756191968917847},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.12877827882766724},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.12095591425895691},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017124","descriptor_name":"Conserved Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017124","descriptor_name":"Conserved Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017124","descriptor_name":"Conserved Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017124","descriptor_name":"Conserved Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btu836","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btu836","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/31/9/1475/50306534/bioinformatics_31_9_1475.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:25527097","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25527097","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:osti.gov:1327624","is_oa":true,"landing_page_url":"https://www.osti.gov/biblio/1327624","pdf_url":"https://www.osti.gov/servlets/purl/1327624","source":{"id":"https://openalex.org/S4306402487","display_name":"OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I139351228","host_organization_name":"Office of Scientific and Technical Information","host_organization_lineage":["https://openalex.org/I139351228"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null},{"id":"pmh:oai:europepmc.org:3818606","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4410658","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btu836","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btu836","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/31/9/1475/50306534/bioinformatics_31_9_1475.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2830508055","display_name":null,"funder_award_id":"GM072285","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G3048636284","display_name":null,"funder_award_id":"GM072285","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G5739319443","display_name":null,"funder_award_id":"R01 GM072285","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"},{"id":"https://openalex.org/F4320338287","display_name":"Oak Ridge National Laboratory","ror":"https://ror.org/01qz5mb56"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2156350407.pdf","grobid_xml":"https://content.openalex.org/works/W2156350407.grobid-xml"},"referenced_works_count":17,"referenced_works":["https://openalex.org/W1554313068","https://openalex.org/W2008116827","https://openalex.org/W2051119339","https://openalex.org/W2051210555","https://openalex.org/W2073895233","https://openalex.org/W2108649941","https://openalex.org/W2109030836","https://openalex.org/W2114083522","https://openalex.org/W2124088653","https://openalex.org/W2130358901","https://openalex.org/W2138122982","https://openalex.org/W2139621307","https://openalex.org/W2141885858","https://openalex.org/W2145268834","https://openalex.org/W2155606054","https://openalex.org/W4320301318","https://openalex.org/W6677611723"],"related_works":["https://openalex.org/W2068608913","https://openalex.org/W3124914020","https://openalex.org/W2141033859","https://openalex.org/W2077542787","https://openalex.org/W2156434174","https://openalex.org/W2071701083","https://openalex.org/W2383687187","https://openalex.org/W2070401501","https://openalex.org/W2121496884","https://openalex.org/W2387910809"],"abstract_inverted_index":{"SUMMARY:":[0],"Identification":[1],"of":[2,18,27,33],"domains":[3,20],"in":[4,100],"protein":[5,19,28,78],"sequences":[6],"allows":[7],"their":[8,44],"assigning":[9],"to":[10,82,95,117],"biological":[11],"functions.":[12],"Several":[13],"webservers":[14],"exist":[15],"for":[16],"identification":[17],"using":[21,85],"similarity":[22],"searches":[23],"against":[24],"various":[25],"databases":[26,70],"domain":[29,37,59,83,118],"models.":[30],"However,":[31],"none":[32],"them":[34],"provides":[35],"comprehensive":[36,58,104],"coverage":[38],"while":[39],"allowing":[40],"bulk":[41],"querying":[42,107],"and":[43,69,88,108,111],"visualization":[45,60,110],"schemes":[46],"can":[47],"be":[48],"improved.":[49],"To":[50],"address":[51],"these":[52],"issues,":[53],"we":[54],"developed":[55],"CDvist":[56],"(a":[57],"tool),":[61],"which":[62],"combines":[63],"the":[64,127],"best":[65,102],"available":[66,125],"search":[67],"algorithms":[68,98],"into":[71],"a":[72,76,101],"user-friendly":[73],"framework.":[74],"First,":[75],"given":[77],"sequence":[79],"is":[80],"matched":[81],"models":[84],"high-specificity":[86],"tools":[87],"only":[89],"then":[90],"unmatched":[91],"segments":[92],"are":[93],"subjected":[94],"more":[96],"sensitive":[97],"resulting":[99],"possible":[103],"coverage.":[105],"Bulk":[106],"rich":[109],"download":[112],"options":[113],"provide":[114],"improved":[115],"functionality":[116],"architecture":[119],"analysis.":[120],"AVAILABILITY":[121],"AND":[122],"IMPLEMENTATION:":[123],"Freely":[124],"on":[126],"web":[128],"at":[129],"http://cdvist.utk.edu":[130],"CONTACT:":[131],"oadebali@vols.utk.edu":[132],"or":[133],"ijouline@utk.edu.":[134]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":13},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":8},{"year":2022,"cited_by_count":10},{"year":2021,"cited_by_count":7},{"year":2020,"cited_by_count":11},{"year":2019,"cited_by_count":8},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":6},{"year":2016,"cited_by_count":7},{"year":2015,"cited_by_count":1}],"updated_date":"2026-07-04T07:58:01.006859","created_date":"2025-10-10T00:00:00"}
