{"id":"https://openalex.org/W2149309843","doi":"https://doi.org/10.1093/bioinformatics/btu813","title":"Workflow4Metabolomics: a collaborative research infrastructure for computational metabolomics","display_name":"Workflow4Metabolomics: a collaborative research infrastructure for computational metabolomics","publication_year":2014,"publication_date":"2014-12-19","ids":{"openalex":"https://openalex.org/W2149309843","doi":"https://doi.org/10.1093/bioinformatics/btu813","mag":"2149309843","pmid":"https://pubmed.ncbi.nlm.nih.gov/25527831"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btu813","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btu813","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/31/9/1493/50306491/bioinformatics_31_9_1493.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/31/9/1493/50306491/bioinformatics_31_9_1493.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5078173184","display_name":"Franck Giacomoni","orcid":"https://orcid.org/0000-0001-6063-4214"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I2802436875","display_name":"Station Biologique de Roscoff","ror":"https://ror.org/03s0pzj56","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I2802436875","https://openalex.org/I39804081","https://openalex.org/I4210107625"]},{"id":"https://openalex.org/I39804081","display_name":"Sorbonne Universit\u00e9","ror":"https://ror.org/02en5vm52","country_code":"FR","type":"education","lineage":["https://openalex.org/I39804081"]},{"id":"https://openalex.org/I4210138015","display_name":"MetaboHUB","ror":"https://ror.org/039gscz82","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I2738703131","https://openalex.org/I4210088668","https://openalex.org/I4210138015"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Franck Giacomoni","raw_affiliation_strings":["1 INRA, UMR 1019, PFEM, 63122 Saint Genes Champanelle, 2CNRS, UPMC, FR2424, ABiMS, Station Biologique, 29680 Roscoff, 3INRA, UMR 1331, PF MetaToul-AXIOM, Toxalim, F-31027 Toulouse, 4INRA, Metabolome Facility of Bordeaux Functional Genomics Center, IBVM, 33140 Villenave d\u2019Ornon and 5CEA, LIST, Laboratory for Data Analysis and Smart Systems (LADIS), MetaboHUB Paris, F-91191 Gif-sur-Yvette, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 INRA, UMR 1019, PFEM, 63122 Saint Genes Champanelle, 2CNRS, UPMC, FR2424, ABiMS, Station Biologique, 29680 Roscoff, 3INRA, UMR 1331, PF MetaToul-AXIOM, Toxalim, F-31027 Toulouse, 4INRA, Metabolome Facility of Bordeaux Functional Genomics Center, IBVM, 33140 Villenave d\u2019Ornon and 5CEA, LIST, Laboratory for Data Analysis and Smart Systems (LADIS), MetaboHUB Paris, F-91191 Gif-sur-Yvette, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I2802436875","https://openalex.org/I39804081","https://openalex.org/I4210138015"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075852017","display_name":"Gildas Le Corguill\u00e9","orcid":"https://orcid.org/0000-0003-1742-9711"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I2802436875","display_name":"Station Biologique de Roscoff","ror":"https://ror.org/03s0pzj56","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I2802436875","https://openalex.org/I39804081","https://openalex.org/I4210107625"]},{"id":"https://openalex.org/I39804081","display_name":"Sorbonne Universit\u00e9","ror":"https://ror.org/02en5vm52","country_code":"FR","type":"education","lineage":["https://openalex.org/I39804081"]},{"id":"https://openalex.org/I4210138015","display_name":"MetaboHUB","ror":"https://ror.org/039gscz82","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I2738703131","https://openalex.org/I4210088668","https://openalex.org/I4210138015"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Gildas Le Corguill\u00e9","raw_affiliation_strings":["1 INRA, UMR 1019, PFEM, 63122 Saint Genes Champanelle, 2CNRS, UPMC, FR2424, ABiMS, Station Biologique, 29680 Roscoff, 3INRA, UMR 1331, PF MetaToul-AXIOM, Toxalim, F-31027 Toulouse, 4INRA, Metabolome Facility of Bordeaux Functional Genomics Center, IBVM, 33140 Villenave d\u2019Ornon and 5CEA, LIST, Laboratory for Data Analysis and Smart Systems (LADIS), MetaboHUB Paris, F-91191 Gif-sur-Yvette, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 INRA, UMR 1019, PFEM, 63122 Saint Genes Champanelle, 2CNRS, UPMC, FR2424, ABiMS, Station Biologique, 29680 Roscoff, 3INRA, UMR 1331, PF MetaToul-AXIOM, Toxalim, F-31027 Toulouse, 4INRA, Metabolome Facility of Bordeaux Functional Genomics Center, IBVM, 33140 Villenave d\u2019Ornon and 5CEA, LIST, Laboratory for Data Analysis and Smart Systems (LADIS), MetaboHUB Paris, F-91191 Gif-sur-Yvette, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I2802436875","https://openalex.org/I39804081","https://openalex.org/I4210138015"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003754092","display_name":"Misharl Monsoor","orcid":null},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I2802436875","display_name":"Station Biologique de Roscoff","ror":"https://ror.org/03s0pzj56","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I2802436875","https://openalex.org/I39804081","https://openalex.org/I4210107625"]},{"id":"https://openalex.org/I39804081","display_name":"Sorbonne Universit\u00e9","ror":"https://ror.org/02en5vm52","country_code":"FR","type":"education","lineage":["https://openalex.org/I39804081"]},{"id":"https://openalex.org/I4210138015","display_name":"MetaboHUB","ror":"https://ror.org/039gscz82","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I2738703131","https://openalex.org/I4210088668","https://openalex.org/I4210138015"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Misharl Monsoor","raw_affiliation_strings":["1 INRA, UMR 1019, PFEM, 63122 Saint Genes Champanelle, 2CNRS, UPMC, FR2424, ABiMS, Station Biologique, 29680 Roscoff, 3INRA, UMR 1331, PF MetaToul-AXIOM, Toxalim, F-31027 Toulouse, 4INRA, Metabolome Facility of Bordeaux Functional Genomics Center, IBVM, 33140 Villenave d\u2019Ornon and 5CEA, LIST, Laboratory for Data Analysis and Smart Systems (LADIS), MetaboHUB Paris, F-91191 Gif-sur-Yvette, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 INRA, UMR 1019, PFEM, 63122 Saint Genes Champanelle, 2CNRS, UPMC, FR2424, ABiMS, Station Biologique, 29680 Roscoff, 3INRA, UMR 1331, PF MetaToul-AXIOM, Toxalim, F-31027 Toulouse, 4INRA, Metabolome Facility of Bordeaux Functional Genomics Center, IBVM, 33140 Villenave d\u2019Ornon and 5CEA, LIST, Laboratory for Data Analysis and Smart Systems (LADIS), MetaboHUB Paris, F-91191 Gif-sur-Yvette, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I2802436875","https://openalex.org/I39804081","https://openalex.org/I4210138015"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019612652","display_name":"Marion Landi","orcid":null},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I2802436875","display_name":"Station Biologique de Roscoff","ror":"https://ror.org/03s0pzj56","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I2802436875","https://openalex.org/I39804081","https://openalex.org/I4210107625"]},{"id":"https://openalex.org/I39804081","display_name":"Sorbonne Universit\u00e9","ror":"https://ror.org/02en5vm52","country_code":"FR","type":"education","lineage":["https://openalex.org/I39804081"]},{"id":"https://openalex.org/I4210138015","display_name":"MetaboHUB","ror":"https://ror.org/039gscz82","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I2738703131","https://openalex.org/I4210088668","https://openalex.org/I4210138015"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Marion Landi","raw_affiliation_strings":["1 INRA, UMR 1019, PFEM, 63122 Saint Genes Champanelle, 2CNRS, UPMC, FR2424, ABiMS, Station Biologique, 29680 Roscoff, 3INRA, UMR 1331, PF MetaToul-AXIOM, Toxalim, F-31027 Toulouse, 4INRA, Metabolome Facility of Bordeaux Functional Genomics Center, IBVM, 33140 Villenave d\u2019Ornon and 5CEA, LIST, Laboratory for Data Analysis and Smart Systems (LADIS), MetaboHUB Paris, F-91191 Gif-sur-Yvette, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 INRA, UMR 1019, PFEM, 63122 Saint Genes Champanelle, 2CNRS, UPMC, FR2424, ABiMS, Station Biologique, 29680 Roscoff, 3INRA, UMR 1331, PF MetaToul-AXIOM, Toxalim, F-31027 Toulouse, 4INRA, Metabolome Facility of Bordeaux Functional Genomics Center, IBVM, 33140 Villenave d\u2019Ornon and 5CEA, LIST, Laboratory for Data Analysis and Smart Systems (LADIS), MetaboHUB Paris, F-91191 Gif-sur-Yvette, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I2802436875","https://openalex.org/I39804081","https://openalex.org/I4210138015"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087877833","display_name":"Pierre P\u00e9ricard","orcid":"https://orcid.org/0000-0001-8167-6448"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I2802436875","display_name":"Station Biologique de Roscoff","ror":"https://ror.org/03s0pzj56","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I2802436875","https://openalex.org/I39804081","https://openalex.org/I4210107625"]},{"id":"https://openalex.org/I39804081","display_name":"Sorbonne Universit\u00e9","ror":"https://ror.org/02en5vm52","country_code":"FR","type":"education","lineage":["https://openalex.org/I39804081"]},{"id":"https://openalex.org/I4210138015","display_name":"MetaboHUB","ror":"https://ror.org/039gscz82","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I2738703131","https://openalex.org/I4210088668","https://openalex.org/I4210138015"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Pierre Pericard","raw_affiliation_strings":["1 INRA, UMR 1019, PFEM, 63122 Saint Genes Champanelle, 2CNRS, UPMC, FR2424, ABiMS, Station Biologique, 29680 Roscoff, 3INRA, UMR 1331, PF MetaToul-AXIOM, Toxalim, F-31027 Toulouse, 4INRA, Metabolome Facility of Bordeaux Functional Genomics Center, IBVM, 33140 Villenave d\u2019Ornon and 5CEA, LIST, Laboratory for Data Analysis and Smart Systems (LADIS), MetaboHUB Paris, F-91191 Gif-sur-Yvette, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 INRA, UMR 1019, PFEM, 63122 Saint Genes Champanelle, 2CNRS, UPMC, FR2424, ABiMS, Station Biologique, 29680 Roscoff, 3INRA, UMR 1331, PF MetaToul-AXIOM, Toxalim, F-31027 Toulouse, 4INRA, Metabolome Facility of Bordeaux Functional Genomics Center, IBVM, 33140 Villenave d\u2019Ornon and 5CEA, LIST, Laboratory for Data Analysis and Smart Systems (LADIS), MetaboHUB Paris, F-91191 Gif-sur-Yvette, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I2802436875","https://openalex.org/I39804081","https://openalex.org/I4210138015"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069552188","display_name":"M\u00e9lanie P\u00e9t\u00e9ra","orcid":"https://orcid.org/0000-0002-1779-6901"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I2802436875","display_name":"Station Biologique de Roscoff","ror":"https://ror.org/03s0pzj56","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I2802436875","https://openalex.org/I39804081","https://openalex.org/I4210107625"]},{"id":"https://openalex.org/I39804081","display_name":"Sorbonne Universit\u00e9","ror":"https://ror.org/02en5vm52","country_code":"FR","type":"education","lineage":["https://openalex.org/I39804081"]},{"id":"https://openalex.org/I4210138015","display_name":"MetaboHUB","ror":"https://ror.org/039gscz82","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I2738703131","https://openalex.org/I4210088668","https://openalex.org/I4210138015"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"M\u00e9lanie P\u00e9t\u00e9ra","raw_affiliation_strings":["1 INRA, UMR 1019, PFEM, 63122 Saint Genes Champanelle, 2CNRS, UPMC, FR2424, ABiMS, Station Biologique, 29680 Roscoff, 3INRA, UMR 1331, PF MetaToul-AXIOM, Toxalim, F-31027 Toulouse, 4INRA, Metabolome Facility of Bordeaux Functional Genomics Center, IBVM, 33140 Villenave d\u2019Ornon and 5CEA, LIST, Laboratory for Data Analysis and Smart Systems (LADIS), MetaboHUB Paris, F-91191 Gif-sur-Yvette, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 INRA, UMR 1019, PFEM, 63122 Saint Genes Champanelle, 2CNRS, UPMC, FR2424, ABiMS, Station Biologique, 29680 Roscoff, 3INRA, UMR 1331, PF MetaToul-AXIOM, Toxalim, F-31027 Toulouse, 4INRA, Metabolome Facility of Bordeaux Functional Genomics Center, IBVM, 33140 Villenave d\u2019Ornon and 5CEA, LIST, Laboratory for Data Analysis and Smart Systems (LADIS), MetaboHUB Paris, F-91191 Gif-sur-Yvette, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I2802436875","https://openalex.org/I39804081","https://openalex.org/I4210138015"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018268873","display_name":"Christophe Dup\u00e9rier","orcid":null},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I2802436875","display_name":"Station Biologique de Roscoff","ror":"https://ror.org/03s0pzj56","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I2802436875","https://openalex.org/I39804081","https://openalex.org/I4210107625"]},{"id":"https://openalex.org/I39804081","display_name":"Sorbonne Universit\u00e9","ror":"https://ror.org/02en5vm52","country_code":"FR","type":"education","lineage":["https://openalex.org/I39804081"]},{"id":"https://openalex.org/I4210138015","display_name":"MetaboHUB","ror":"https://ror.org/039gscz82","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I2738703131","https://openalex.org/I4210088668","https://openalex.org/I4210138015"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Christophe Duperier","raw_affiliation_strings":["1 INRA, UMR 1019, PFEM, 63122 Saint Genes Champanelle, 2CNRS, UPMC, FR2424, ABiMS, Station Biologique, 29680 Roscoff, 3INRA, UMR 1331, PF MetaToul-AXIOM, Toxalim, F-31027 Toulouse, 4INRA, Metabolome Facility of Bordeaux Functional Genomics Center, IBVM, 33140 Villenave d\u2019Ornon and 5CEA, LIST, Laboratory for Data Analysis and Smart Systems (LADIS), MetaboHUB Paris, F-91191 Gif-sur-Yvette, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 INRA, UMR 1019, PFEM, 63122 Saint Genes Champanelle, 2CNRS, UPMC, FR2424, ABiMS, Station Biologique, 29680 Roscoff, 3INRA, UMR 1331, PF MetaToul-AXIOM, Toxalim, F-31027 Toulouse, 4INRA, Metabolome Facility of Bordeaux Functional Genomics Center, IBVM, 33140 Villenave d\u2019Ornon and 5CEA, LIST, Laboratory for Data Analysis and Smart Systems (LADIS), MetaboHUB Paris, F-91191 Gif-sur-Yvette, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I2802436875","https://openalex.org/I39804081","https://openalex.org/I4210138015"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082161589","display_name":"Marie Tremblay\u2010Franco","orcid":"https://orcid.org/0000-0003-4678-4456"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I2802436875","display_name":"Station Biologique de Roscoff","ror":"https://ror.org/03s0pzj56","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I2802436875","https://openalex.org/I39804081","https://openalex.org/I4210107625"]},{"id":"https://openalex.org/I39804081","display_name":"Sorbonne Universit\u00e9","ror":"https://ror.org/02en5vm52","country_code":"FR","type":"education","lineage":["https://openalex.org/I39804081"]},{"id":"https://openalex.org/I4210138015","display_name":"MetaboHUB","ror":"https://ror.org/039gscz82","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I2738703131","https://openalex.org/I4210088668","https://openalex.org/I4210138015"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Marie Tremblay-Franco","raw_affiliation_strings":["1 INRA, UMR 1019, PFEM, 63122 Saint Genes Champanelle, 2CNRS, UPMC, FR2424, ABiMS, Station Biologique, 29680 Roscoff, 3INRA, UMR 1331, PF MetaToul-AXIOM, Toxalim, F-31027 Toulouse, 4INRA, Metabolome Facility of Bordeaux Functional Genomics Center, IBVM, 33140 Villenave d\u2019Ornon and 5CEA, LIST, Laboratory for Data Analysis and Smart Systems (LADIS), MetaboHUB Paris, F-91191 Gif-sur-Yvette, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 INRA, UMR 1019, PFEM, 63122 Saint Genes Champanelle, 2CNRS, UPMC, FR2424, ABiMS, Station Biologique, 29680 Roscoff, 3INRA, UMR 1331, PF MetaToul-AXIOM, Toxalim, F-31027 Toulouse, 4INRA, Metabolome Facility of Bordeaux Functional Genomics Center, IBVM, 33140 Villenave d\u2019Ornon and 5CEA, LIST, Laboratory for Data Analysis and Smart Systems (LADIS), MetaboHUB Paris, F-91191 Gif-sur-Yvette, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I2802436875","https://openalex.org/I39804081","https://openalex.org/I4210138015"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111596149","display_name":"Jean\u2010Fran\u00e7ois Martin","orcid":null},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I2802436875","display_name":"Station Biologique de Roscoff","ror":"https://ror.org/03s0pzj56","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I2802436875","https://openalex.org/I39804081","https://openalex.org/I4210107625"]},{"id":"https://openalex.org/I39804081","display_name":"Sorbonne Universit\u00e9","ror":"https://ror.org/02en5vm52","country_code":"FR","type":"education","lineage":["https://openalex.org/I39804081"]},{"id":"https://openalex.org/I4210138015","display_name":"MetaboHUB","ror":"https://ror.org/039gscz82","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I2738703131","https://openalex.org/I4210088668","https://openalex.org/I4210138015"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Jean-Fran\u00e7ois Martin","raw_affiliation_strings":["1 INRA, UMR 1019, PFEM, 63122 Saint Genes Champanelle, 2CNRS, UPMC, FR2424, ABiMS, Station Biologique, 29680 Roscoff, 3INRA, UMR 1331, PF MetaToul-AXIOM, Toxalim, F-31027 Toulouse, 4INRA, Metabolome Facility of Bordeaux Functional Genomics Center, IBVM, 33140 Villenave d\u2019Ornon and 5CEA, LIST, Laboratory for Data Analysis and Smart Systems (LADIS), MetaboHUB Paris, F-91191 Gif-sur-Yvette, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 INRA, UMR 1019, PFEM, 63122 Saint Genes Champanelle, 2CNRS, UPMC, FR2424, ABiMS, Station Biologique, 29680 Roscoff, 3INRA, UMR 1331, PF MetaToul-AXIOM, Toxalim, F-31027 Toulouse, 4INRA, Metabolome Facility of Bordeaux Functional Genomics Center, IBVM, 33140 Villenave d\u2019Ornon and 5CEA, LIST, Laboratory for Data Analysis and Smart Systems (LADIS), MetaboHUB Paris, F-91191 Gif-sur-Yvette, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I2802436875","https://openalex.org/I39804081","https://openalex.org/I4210138015"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013271600","display_name":"Daniel Jacob","orcid":"https://orcid.org/0000-0002-6687-7169"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I2802436875","display_name":"Station Biologique de Roscoff","ror":"https://ror.org/03s0pzj56","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I2802436875","https://openalex.org/I39804081","https://openalex.org/I4210107625"]},{"id":"https://openalex.org/I39804081","display_name":"Sorbonne Universit\u00e9","ror":"https://ror.org/02en5vm52","country_code":"FR","type":"education","lineage":["https://openalex.org/I39804081"]},{"id":"https://openalex.org/I4210089449","display_name":"Biologie du Fruit et Pathologie","ror":"https://ror.org/00ccpdp17","country_code":"FR","type":"facility","lineage":["https://openalex.org/I15057530","https://openalex.org/I4210088668","https://openalex.org/I4210089449","https://openalex.org/I4210096859"]},{"id":"https://openalex.org/I4210138015","display_name":"MetaboHUB","ror":"https://ror.org/039gscz82","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I2738703131","https://openalex.org/I4210088668","https://openalex.org/I4210138015"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Daniel Jacob","raw_affiliation_strings":["1 INRA, UMR 1019, PFEM, 63122 Saint Genes Champanelle, 2CNRS, UPMC, FR2424, ABiMS, Station Biologique, 29680 Roscoff, 3INRA, UMR 1331, PF MetaToul-AXIOM, Toxalim, F-31027 Toulouse, 4INRA, Metabolome Facility of Bordeaux Functional Genomics Center, IBVM, 33140 Villenave d\u2019Ornon and 5CEA, LIST, Laboratory for Data Analysis and Smart Systems (LADIS), MetaboHUB Paris, F-91191 Gif-sur-Yvette, France","BFP - Biologie du fruit et pathologie (Centre INRA Bordeaux-Aquitaine 71 avenue Bourlaux BP81 F-33883 Villenave d'Ornon - France)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 INRA, UMR 1019, PFEM, 63122 Saint Genes Champanelle, 2CNRS, UPMC, FR2424, ABiMS, Station Biologique, 29680 Roscoff, 3INRA, UMR 1331, PF MetaToul-AXIOM, Toxalim, F-31027 Toulouse, 4INRA, Metabolome Facility of Bordeaux Functional Genomics Center, IBVM, 33140 Villenave d\u2019Ornon and 5CEA, LIST, Laboratory for Data Analysis and Smart Systems (LADIS), MetaboHUB Paris, F-91191 Gif-sur-Yvette, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I2802436875","https://openalex.org/I39804081","https://openalex.org/I4210138015"]},{"raw_affiliation_string":"BFP - Biologie du fruit et pathologie (Centre INRA Bordeaux-Aquitaine 71 avenue Bourlaux BP81 F-33883 Villenave d'Ornon - France)","institution_ids":["https://openalex.org/I4210089449"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070285199","display_name":"Sophie Goulitquer","orcid":null},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I2802436875","display_name":"Station Biologique de Roscoff","ror":"https://ror.org/03s0pzj56","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I2802436875","https://openalex.org/I39804081","https://openalex.org/I4210107625"]},{"id":"https://openalex.org/I39804081","display_name":"Sorbonne Universit\u00e9","ror":"https://ror.org/02en5vm52","country_code":"FR","type":"education","lineage":["https://openalex.org/I39804081"]},{"id":"https://openalex.org/I4210138015","display_name":"MetaboHUB","ror":"https://ror.org/039gscz82","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I2738703131","https://openalex.org/I4210088668","https://openalex.org/I4210138015"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Sophie Goulitquer","raw_affiliation_strings":["1 INRA, UMR 1019, PFEM, 63122 Saint Genes Champanelle, 2CNRS, UPMC, FR2424, ABiMS, Station Biologique, 29680 Roscoff, 3INRA, UMR 1331, PF MetaToul-AXIOM, Toxalim, F-31027 Toulouse, 4INRA, Metabolome Facility of Bordeaux Functional Genomics Center, IBVM, 33140 Villenave d\u2019Ornon and 5CEA, LIST, Laboratory for Data Analysis and Smart Systems (LADIS), MetaboHUB Paris, F-91191 Gif-sur-Yvette, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 INRA, UMR 1019, PFEM, 63122 Saint Genes Champanelle, 2CNRS, UPMC, FR2424, ABiMS, Station Biologique, 29680 Roscoff, 3INRA, UMR 1331, PF MetaToul-AXIOM, Toxalim, F-31027 Toulouse, 4INRA, Metabolome Facility of Bordeaux Functional Genomics Center, IBVM, 33140 Villenave d\u2019Ornon and 5CEA, LIST, Laboratory for Data Analysis and Smart Systems (LADIS), MetaboHUB Paris, F-91191 Gif-sur-Yvette, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I2802436875","https://openalex.org/I39804081","https://openalex.org/I4210138015"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068295331","display_name":"Etienne Th\u00e9venot","orcid":"https://orcid.org/0000-0003-1019-4577"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I2802436875","display_name":"Station Biologique de Roscoff","ror":"https://ror.org/03s0pzj56","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I2802436875","https://openalex.org/I39804081","https://openalex.org/I4210107625"]},{"id":"https://openalex.org/I39804081","display_name":"Sorbonne Universit\u00e9","ror":"https://ror.org/02en5vm52","country_code":"FR","type":"education","lineage":["https://openalex.org/I39804081"]},{"id":"https://openalex.org/I4210138015","display_name":"MetaboHUB","ror":"https://ror.org/039gscz82","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I2738703131","https://openalex.org/I4210088668","https://openalex.org/I4210138015"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Etienne A. Th\u00e9venot","raw_affiliation_strings":["1 INRA, UMR 1019, PFEM, 63122 Saint Genes Champanelle, 2CNRS, UPMC, FR2424, ABiMS, Station Biologique, 29680 Roscoff, 3INRA, UMR 1331, PF MetaToul-AXIOM, Toxalim, F-31027 Toulouse, 4INRA, Metabolome Facility of Bordeaux Functional Genomics Center, IBVM, 33140 Villenave d\u2019Ornon and 5CEA, LIST, Laboratory for Data Analysis and Smart Systems (LADIS), MetaboHUB Paris, F-91191 Gif-sur-Yvette, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 INRA, UMR 1019, PFEM, 63122 Saint Genes Champanelle, 2CNRS, UPMC, FR2424, ABiMS, Station Biologique, 29680 Roscoff, 3INRA, UMR 1331, PF MetaToul-AXIOM, Toxalim, F-31027 Toulouse, 4INRA, Metabolome Facility of Bordeaux Functional Genomics Center, IBVM, 33140 Villenave d\u2019Ornon and 5CEA, LIST, Laboratory for Data Analysis and Smart Systems (LADIS), MetaboHUB Paris, F-91191 Gif-sur-Yvette, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I2802436875","https://openalex.org/I39804081","https://openalex.org/I4210138015"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5060347167","display_name":"Christophe Caron","orcid":null},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I2802436875","display_name":"Station Biologique de Roscoff","ror":"https://ror.org/03s0pzj56","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I2802436875","https://openalex.org/I39804081","https://openalex.org/I4210107625"]},{"id":"https://openalex.org/I39804081","display_name":"Sorbonne Universit\u00e9","ror":"https://ror.org/02en5vm52","country_code":"FR","type":"education","lineage":["https://openalex.org/I39804081"]},{"id":"https://openalex.org/I4210138015","display_name":"MetaboHUB","ror":"https://ror.org/039gscz82","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I2738703131","https://openalex.org/I4210088668","https://openalex.org/I4210138015"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Christophe Caron","raw_affiliation_strings":["1 INRA, UMR 1019, PFEM, 63122 Saint Genes Champanelle, 2CNRS, UPMC, FR2424, ABiMS, Station Biologique, 29680 Roscoff, 3INRA, UMR 1331, PF MetaToul-AXIOM, Toxalim, F-31027 Toulouse, 4INRA, Metabolome Facility of Bordeaux Functional Genomics Center, IBVM, 33140 Villenave d\u2019Ornon and 5CEA, LIST, Laboratory for Data Analysis and Smart Systems (LADIS), MetaboHUB Paris, F-91191 Gif-sur-Yvette, France","CNRS - Centre National de la Recherche Scientifique (France)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 INRA, UMR 1019, PFEM, 63122 Saint Genes Champanelle, 2CNRS, UPMC, FR2424, ABiMS, Station Biologique, 29680 Roscoff, 3INRA, UMR 1331, PF MetaToul-AXIOM, Toxalim, F-31027 Toulouse, 4INRA, Metabolome Facility of Bordeaux Functional Genomics Center, IBVM, 33140 Villenave d\u2019Ornon and 5CEA, LIST, Laboratory for Data Analysis and Smart Systems (LADIS), MetaboHUB Paris, F-91191 Gif-sur-Yvette, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I2802436875","https://openalex.org/I39804081","https://openalex.org/I4210138015"]},{"raw_affiliation_string":"CNRS - Centre National de la Recherche Scientifique (France)","institution_ids":["https://openalex.org/I1294671590"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5060347167","https://openalex.org/A5068295331"],"corresponding_institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I2802436875","https://openalex.org/I39804081","https://openalex.org/I4210138015"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":6.8818,"has_fulltext":true,"cited_by_count":469,"citation_normalized_percentile":{"value":0.97889785,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":100},"biblio":{"volume":"31","issue":"9","first_page":"1493","last_page":"1495"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9836999773979187,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9836999773979187,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.004800000227987766,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T14393","display_name":"Health, Environment, Cognitive Aging","score":0.0012000000569969416,"subfield":{"id":"https://openalex.org/subfields/2307","display_name":"Health, Toxicology and Mutagenesis"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.8119194507598877},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7582762241363525},{"id":"https://openalex.org/keywords/field","display_name":"Field (mathematics)","score":0.570199728012085},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.5295670628547668},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.44349685311317444},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.4321174621582031},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.21066054701805115},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.10600206255912781}],"concepts":[{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.8119194507598877},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7582762241363525},{"id":"https://openalex.org/C9652623","wikidata":"https://www.wikidata.org/wiki/Q190109","display_name":"Field (mathematics)","level":2,"score":0.570199728012085},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.5295670628547668},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.44349685311317444},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.4321174621582031},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.21066054701805115},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.10600206255912781},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055432","descriptor_name":"Metabolomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D055432","descriptor_name":"Metabolomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D055432","descriptor_name":"Metabolomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057188","descriptor_name":"Workflow","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057188","descriptor_name":"Workflow","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057188","descriptor_name":"Workflow","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":7,"locations":[{"id":"doi:10.1093/bioinformatics/btu813","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btu813","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/31/9/1493/50306491/bioinformatics_31_9_1493.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:25527831","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25527831","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:HAL:hal-01123263v1","is_oa":true,"landing_page_url":"https://hal.science/hal-01123263","pdf_url":"https://hal.science/hal-01123263/document","source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://bioinformatics.oxfordjournals.org/","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:HAL:hal-01214152v1","is_oa":true,"landing_page_url":"https://hal.science/hal-01214152","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"JOBIM 2015 (16e \u00e9dition des Journ\u00e9es Ouvertes en Biologie, Informatique et Math\u00e9matiques )","raw_type":"info:eu-repo/semantics/conferenceObject"},{"id":"pmh:oai:oskar-bordeaux.fr:20.500.12278/111989","is_oa":false,"landing_page_url":"https://oskar-bordeaux.fr/handle/20.500.12278/111989","pdf_url":null,"source":{"id":"https://openalex.org/S4306402569","display_name":"Oskar-Bordeaux (Universite de Bordeaux)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I15057530","host_organization_name":"Universit\u00e9 de Bordeaux","host_organization_lineage":["https://openalex.org/I15057530"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Autre communication scientifique (congr\u00e8s sans actes - poster - s\u00e9minaire...)"},{"id":"pmh:oai:oskar-bordeaux.fr:20.500.12278/169985","is_oa":false,"landing_page_url":"https://oskar-bordeaux.fr/handle/20.500.12278/169985","pdf_url":null,"source":{"id":"https://openalex.org/S4306402569","display_name":"Oskar-Bordeaux (Universite de Bordeaux)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I15057530","host_organization_name":"Universit\u00e9 de Bordeaux","host_organization_lineage":["https://openalex.org/I15057530"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Autre communication scientifique (congr\u00e8s sans actes - poster - s\u00e9minaire...)"},{"id":"pmh:oai:pubmedcentral.nih.gov:4410648","is_oa":true,"landing_page_url":"http://doi.org/10.1093/bioinformatics/btu813","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btu813","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btu813","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/31/9/1493/50306491/bioinformatics_31_9_1493.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.6299999952316284,"id":"https://metadata.un.org/sdg/9","display_name":"Industry, innovation and infrastructure"}],"awards":[{"id":"https://openalex.org/G1527563075","display_name":null,"funder_award_id":"ANR-10- BTBR-04","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G363901569","display_name":null,"funder_award_id":"10\u2010BTBR\u201004","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G5802621812","display_name":null,"funder_award_id":"ANR-11-INBS","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G5831779543","display_name":"Biotechnologies pour la valorisation des macroalgues","funder_award_id":"ANR-10-BTBR-0004","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G6068764742","display_name":"Institut fran\u00e7ais de bioinformatique","funder_award_id":"ANR-11-INBS-0013","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G7240651115","display_name":null,"funder_award_id":"ANR-10","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G752369905","display_name":null,"funder_award_id":"ANR-10-BTBR","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G8907031238","display_name":"D\u00e9veloppement d'une infrastructure fran\u00e7aise distribu\u00e9e pour la m\u00e9tabolomique d\u00e9di\u00e9e \u00e0 l'innovation","funder_award_id":"ANR-11-INBS-0010","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"}],"funders":[{"id":"https://openalex.org/F4320320883","display_name":"Agence Nationale de la Recherche","ror":"https://ror.org/00rbzpz17"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2149309843.pdf","grobid_xml":"https://content.openalex.org/works/W2149309843.grobid-xml"},"referenced_works_count":17,"referenced_works":["https://openalex.org/W143096088","https://openalex.org/W1964010911","https://openalex.org/W1979597489","https://openalex.org/W1982185581","https://openalex.org/W2013036395","https://openalex.org/W2027974246","https://openalex.org/W2044091012","https://openalex.org/W2080046774","https://openalex.org/W2108488321","https://openalex.org/W2115166033","https://openalex.org/W2117300383","https://openalex.org/W2125575989","https://openalex.org/W2136482257","https://openalex.org/W2146103026","https://openalex.org/W2147831097","https://openalex.org/W2163410580","https://openalex.org/W2234154942"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W2361861616","https://openalex.org/W2263699433","https://openalex.org/W2377979023","https://openalex.org/W2218034408","https://openalex.org/W2392921965","https://openalex.org/W2358755282","https://openalex.org/W2625833328","https://openalex.org/W4405124681","https://openalex.org/W1533177136"],"abstract_inverted_index":{"SUMMARY:":[0],"The":[1],"complex,":[2],"rapidly":[3],"evolving":[4],"field":[5],"of":[6,17,83],"computational":[7,61,94],"metabolomics":[8],"calls":[9],"for":[10,20,45,60,103],"collaborative":[11,57],"infrastructures":[12],"where":[13],"the":[14,32,52,71,89,120,128,134],"large":[15],"volume":[16],"new":[18],"algorithms":[19],"data":[21],"pre-processing,":[22],"statistical":[23],"analysis":[24],"and":[25,38,56,81,86,93,118,125,133,137],"annotation":[26],"can":[27,96],"be":[28,97],"readily":[29],"integrated":[30],"whatever":[31],"language,":[33],"evaluated":[34],"on":[35],"reference":[36],"datasets":[37],"chained":[39],"to":[40,113],"build":[41],"ad":[42],"hoc":[43],"workflows":[44],"users.":[46],"We":[47],"have":[48],"developed":[49,124],"Workflow4Metabolomics":[50],"(W4M),":[51],"first":[53],"fully":[54],"open-source":[55],"online":[58],"platform":[59,74],"metabolomics.":[62],"W4M":[63,91,122],"is":[64,123],"a":[65,100,115],"virtual":[66,101],"research":[67],"environment":[68],"built":[69],"upon":[70],"Galaxy":[72],"web-based":[73],"technology.":[75],"It":[76],"enables":[77,111],"ergonomic":[78],"integration,":[79],"exchange":[80],"running":[82],"individual":[84],"modules":[85],"workflows.":[87],"Alternatively,":[88],"whole":[90],"framework":[92],"tools":[95],"downloaded":[98],"as":[99],"machine":[102],"local":[104],"installation.":[105],"AVAILABILITY":[106],"AND":[107],"IMPLEMENTATION:":[108],"http://workflow4metabolomics.org":[109],"homepage":[110],"users":[112],"open":[114],"private":[116],"account":[117],"access":[119],"infrastructure.":[121],"maintained":[126],"by":[127],"French":[129,135],"Bioinformatics":[130],"Institute":[131],"(IFB)":[132],"Metabolomics":[136],"Fluxomics":[138],"Infrastructure":[139],"(MetaboHUB).":[140],"CONTACT:":[141],"contact@workflow4metabolomics.org.":[142]},"counts_by_year":[{"year":2026,"cited_by_count":15},{"year":2025,"cited_by_count":42},{"year":2024,"cited_by_count":56},{"year":2023,"cited_by_count":48},{"year":2022,"cited_by_count":54},{"year":2021,"cited_by_count":62},{"year":2020,"cited_by_count":57},{"year":2019,"cited_by_count":48},{"year":2018,"cited_by_count":32},{"year":2017,"cited_by_count":29},{"year":2016,"cited_by_count":18},{"year":2015,"cited_by_count":5},{"year":2014,"cited_by_count":1}],"updated_date":"2026-08-18T07:49:30.821534","created_date":"2025-10-10T00:00:00"}
