{"id":"https://openalex.org/W2152644043","doi":"https://doi.org/10.1093/bioinformatics/btu660","title":"Deviance residuals-based sparse PLS and sparse kernel PLS regression for censored data","display_name":"Deviance residuals-based sparse PLS and sparse kernel PLS regression for censored data","publication_year":2014,"publication_date":"2014-10-06","ids":{"openalex":"https://openalex.org/W2152644043","doi":"https://doi.org/10.1093/bioinformatics/btu660","mag":"2152644043","pmid":"https://pubmed.ncbi.nlm.nih.gov/25286920"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btu660","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btu660","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/31/3/397/49011696/bioinformatics_31_3_397.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/31/3/397/49011696/bioinformatics_31_3_397.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5066760128","display_name":"Philippe Bastien","orcid":"https://orcid.org/0000-0002-5602-5827"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I14285755","display_name":"L'Or\u00e9al (France)","ror":"https://ror.org/00nb3j622","country_code":"FR","type":"company","lineage":["https://openalex.org/I14285755"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"funder","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I68947357","display_name":"Universit\u00e9 de Strasbourg","ror":"https://ror.org/00pg6eq24","country_code":"FR","type":"education","lineage":["https://openalex.org/I68947357"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Philippe Bastien","raw_affiliation_strings":["1 L\u2019Or\u00e9al Recherche & Innovation, 93601 Aulnay-sous-Bois, 2 IRMA, CNRS UMR 7501, Labex IRMIA, Universit\u00e9 de Strasbourg, 67084 Strasbourg Cedex, 3 INSERM EA3430, Laboratoire de Biostatistique, Facult\u00e9 de M\u00e9decine de Strasbourg, Labex IRMIA, Universit\u00e9 de Strasbourg, 67085 Strasbourg Cedex, France"],"affiliations":[{"raw_affiliation_string":"1 L\u2019Or\u00e9al Recherche & Innovation, 93601 Aulnay-sous-Bois, 2 IRMA, CNRS UMR 7501, Labex IRMIA, Universit\u00e9 de Strasbourg, 67084 Strasbourg Cedex, 3 INSERM EA3430, Laboratoire de Biostatistique, Facult\u00e9 de M\u00e9decine de Strasbourg, Labex IRMIA, Universit\u00e9 de Strasbourg, 67085 Strasbourg Cedex, France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I14285755","https://openalex.org/I68947357","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018958239","display_name":"Fr\u00e9d\u00e8ric Bertrand","orcid":"https://orcid.org/0000-0002-0837-8281"},"institutions":[{"id":"https://openalex.org/I14285755","display_name":"L'Or\u00e9al (France)","ror":"https://ror.org/00nb3j622","country_code":"FR","type":"company","lineage":["https://openalex.org/I14285755"]},{"id":"https://openalex.org/I68947357","display_name":"Universit\u00e9 de Strasbourg","ror":"https://ror.org/00pg6eq24","country_code":"FR","type":"education","lineage":["https://openalex.org/I68947357"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"funder","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1294671590"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Fr\u00e9d\u00e9ric Bertrand","raw_affiliation_strings":["1 L\u2019Or\u00e9al Recherche & Innovation, 93601 Aulnay-sous-Bois, 2 IRMA, CNRS UMR 7501, Labex IRMIA, Universit\u00e9 de Strasbourg, 67084 Strasbourg Cedex, 3 INSERM EA3430, Laboratoire de Biostatistique, Facult\u00e9 de M\u00e9decine de Strasbourg, Labex IRMIA, Universit\u00e9 de Strasbourg, 67085 Strasbourg Cedex, France"],"affiliations":[{"raw_affiliation_string":"1 L\u2019Or\u00e9al Recherche & Innovation, 93601 Aulnay-sous-Bois, 2 IRMA, CNRS UMR 7501, Labex IRMIA, Universit\u00e9 de Strasbourg, 67084 Strasbourg Cedex, 3 INSERM EA3430, Laboratoire de Biostatistique, Facult\u00e9 de M\u00e9decine de Strasbourg, Labex IRMIA, Universit\u00e9 de Strasbourg, 67085 Strasbourg Cedex, France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I14285755","https://openalex.org/I68947357","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5107466888","display_name":"Nicolas Meyer","orcid":null},"institutions":[{"id":"https://openalex.org/I68947357","display_name":"Universit\u00e9 de Strasbourg","ror":"https://ror.org/00pg6eq24","country_code":"FR","type":"education","lineage":["https://openalex.org/I68947357"]},{"id":"https://openalex.org/I14285755","display_name":"L'Or\u00e9al (France)","ror":"https://ror.org/00nb3j622","country_code":"FR","type":"company","lineage":["https://openalex.org/I14285755"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"funder","lineage":["https://openalex.org/I154526488"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Nicolas Meyer","raw_affiliation_strings":["1 L\u2019Or\u00e9al Recherche & Innovation, 93601 Aulnay-sous-Bois, 2 IRMA, CNRS UMR 7501, Labex IRMIA, Universit\u00e9 de Strasbourg, 67084 Strasbourg Cedex, 3 INSERM EA3430, Laboratoire de Biostatistique, Facult\u00e9 de M\u00e9decine de Strasbourg, Labex IRMIA, Universit\u00e9 de Strasbourg, 67085 Strasbourg Cedex, France"],"affiliations":[{"raw_affiliation_string":"1 L\u2019Or\u00e9al Recherche & Innovation, 93601 Aulnay-sous-Bois, 2 IRMA, CNRS UMR 7501, Labex IRMIA, Universit\u00e9 de Strasbourg, 67084 Strasbourg Cedex, 3 INSERM EA3430, Laboratoire de Biostatistique, Facult\u00e9 de M\u00e9decine de Strasbourg, Labex IRMIA, Universit\u00e9 de Strasbourg, 67085 Strasbourg Cedex, France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I14285755","https://openalex.org/I68947357","https://openalex.org/I1294671590"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5105923862","display_name":"Myriam Maumy\u2010Bertrand","orcid":"https://orcid.org/0000-0002-4615-1512"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I68947357","display_name":"Universit\u00e9 de Strasbourg","ror":"https://ror.org/00pg6eq24","country_code":"FR","type":"education","lineage":["https://openalex.org/I68947357"]},{"id":"https://openalex.org/I14285755","display_name":"L'Or\u00e9al (France)","ror":"https://ror.org/00nb3j622","country_code":"FR","type":"company","lineage":["https://openalex.org/I14285755"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"funder","lineage":["https://openalex.org/I154526488"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Myriam Maumy-Bertrand","raw_affiliation_strings":["1 L\u2019Or\u00e9al Recherche & Innovation, 93601 Aulnay-sous-Bois, 2 IRMA, CNRS UMR 7501, Labex IRMIA, Universit\u00e9 de Strasbourg, 67084 Strasbourg Cedex, 3 INSERM EA3430, Laboratoire de Biostatistique, Facult\u00e9 de M\u00e9decine de Strasbourg, Labex IRMIA, Universit\u00e9 de Strasbourg, 67085 Strasbourg Cedex, France"],"affiliations":[{"raw_affiliation_string":"1 L\u2019Or\u00e9al Recherche & Innovation, 93601 Aulnay-sous-Bois, 2 IRMA, CNRS UMR 7501, Labex IRMIA, Universit\u00e9 de Strasbourg, 67084 Strasbourg Cedex, 3 INSERM EA3430, Laboratoire de Biostatistique, Facult\u00e9 de M\u00e9decine de Strasbourg, Labex IRMIA, Universit\u00e9 de Strasbourg, 67085 Strasbourg Cedex, France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I14285755","https://openalex.org/I68947357","https://openalex.org/I1294671590"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5066760128"],"corresponding_institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I14285755","https://openalex.org/I154526488","https://openalex.org/I68947357"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":0.7101,"has_fulltext":true,"cited_by_count":69,"citation_normalized_percentile":{"value":0.70895102,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":100},"biblio":{"volume":"31","issue":"3","first_page":"397","last_page":"404"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10136","display_name":"Statistical Methods and Inference","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/2613","display_name":"Statistics and Probability"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10594","display_name":"Genetic and phenotypic traits in livestock","score":0.9934999942779541,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/collinearity","display_name":"Collinearity","score":0.6986018419265747},{"id":"https://openalex.org/keywords/deviance","display_name":"Deviance (statistics)","score":0.6368091106414795},{"id":"https://openalex.org/keywords/lasso","display_name":"Lasso (programming language)","score":0.6175373792648315},{"id":"https://openalex.org/keywords/feature-selection","display_name":"Feature selection","score":0.5663701295852661},{"id":"https://openalex.org/keywords/covariate","display_name":"Covariate","score":0.5625391006469727},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5518574714660645},{"id":"https://openalex.org/keywords/elastic-net-regularization","display_name":"Elastic net regularization","score":0.5442008376121521},{"id":"https://openalex.org/keywords/interpretability","display_name":"Interpretability","score":0.5131192803382874},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.4743408262729645},{"id":"https://openalex.org/keywords/proportional-hazards-model","display_name":"Proportional hazards model","score":0.4735276699066162},{"id":"https://openalex.org/keywords/regression","display_name":"Regression","score":0.44114089012145996},{"id":"https://openalex.org/keywords/partial-least-squares-regression","display_name":"Partial least squares regression","score":0.43851935863494873},{"id":"https://openalex.org/keywords/regression-analysis","display_name":"Regression analysis","score":0.4146078824996948},{"id":"https://openalex.org/keywords/censoring","display_name":"Censoring (clinical trials)","score":0.41257452964782715},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4072093367576599},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.35890698432922363},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.32946568727493286},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.2609546184539795}],"concepts":[{"id":"https://openalex.org/C106192678","wikidata":"https://www.wikidata.org/wiki/Q1419761","display_name":"Collinearity","level":2,"score":0.6986018419265747},{"id":"https://openalex.org/C177599991","wikidata":"https://www.wikidata.org/wiki/Q3706279","display_name":"Deviance (statistics)","level":2,"score":0.6368091106414795},{"id":"https://openalex.org/C37616216","wikidata":"https://www.wikidata.org/wiki/Q3218363","display_name":"Lasso (programming language)","level":2,"score":0.6175373792648315},{"id":"https://openalex.org/C148483581","wikidata":"https://www.wikidata.org/wiki/Q446488","display_name":"Feature selection","level":2,"score":0.5663701295852661},{"id":"https://openalex.org/C119043178","wikidata":"https://www.wikidata.org/wiki/Q320723","display_name":"Covariate","level":2,"score":0.5625391006469727},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5518574714660645},{"id":"https://openalex.org/C203868755","wikidata":"https://www.wikidata.org/wiki/Q5353562","display_name":"Elastic net regularization","level":3,"score":0.5442008376121521},{"id":"https://openalex.org/C2781067378","wikidata":"https://www.wikidata.org/wiki/Q17027399","display_name":"Interpretability","level":2,"score":0.5131192803382874},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.4743408262729645},{"id":"https://openalex.org/C50382708","wikidata":"https://www.wikidata.org/wiki/Q223218","display_name":"Proportional hazards model","level":2,"score":0.4735276699066162},{"id":"https://openalex.org/C83546350","wikidata":"https://www.wikidata.org/wiki/Q1139051","display_name":"Regression","level":2,"score":0.44114089012145996},{"id":"https://openalex.org/C22354355","wikidata":"https://www.wikidata.org/wiki/Q422009","display_name":"Partial least squares regression","level":2,"score":0.43851935863494873},{"id":"https://openalex.org/C152877465","wikidata":"https://www.wikidata.org/wiki/Q208042","display_name":"Regression analysis","level":2,"score":0.4146078824996948},{"id":"https://openalex.org/C137668524","wikidata":"https://www.wikidata.org/wiki/Q189813","display_name":"Censoring (clinical trials)","level":2,"score":0.41257452964782715},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4072093367576599},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.35890698432922363},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.32946568727493286},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.2609546184539795},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012044","descriptor_name":"Regression Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012044","descriptor_name":"Regression Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012044","descriptor_name":"Regression Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015996","descriptor_name":"Survival Rate","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015996","descriptor_name":"Survival Rate","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015996","descriptor_name":"Survival Rate","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016016","descriptor_name":"Proportional Hazards Models","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016016","descriptor_name":"Proportional Hazards Models","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016016","descriptor_name":"Proportional Hazards Models","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016018","descriptor_name":"Least-Squares Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016018","descriptor_name":"Least-Squares Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016018","descriptor_name":"Least-Squares Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018401","descriptor_name":"Sample Size","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018401","descriptor_name":"Sample Size","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018401","descriptor_name":"Sample Size","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btu660","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btu660","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/31/3/397/49011696/bioinformatics_31_3_397.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:25286920","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25286920","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:HAL:hal-01299454v1","is_oa":false,"landing_page_url":"https://hal.science/hal-01299454","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics, 2015, 31 (3), ⟨10.1093/bioinformatics/btu660⟩","raw_type":"Journal articles"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btu660","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btu660","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/31/3/397/49011696/bioinformatics_31_3_397.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/16","score":0.7200000286102295,"display_name":"Peace, Justice and strong institutions"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320320893","display_name":"Institut National de la Sant\u00e9 et de la Recherche M\u00e9dicale","ror":"https://ror.org/02vjkv261"},{"id":"https://openalex.org/F4320322147","display_name":"Universit\u00e9 de Strasbourg","ror":"https://ror.org/00pg6eq24"},{"id":"https://openalex.org/F4320322892","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2152644043.pdf","grobid_xml":"https://content.openalex.org/works/W2152644043.grobid-xml"},"referenced_works_count":75,"referenced_works":["https://openalex.org/W3644042","https://openalex.org/W36040755","https://openalex.org/W1580788756","https://openalex.org/W1706602022","https://openalex.org/W1750383427","https://openalex.org/W1971627038","https://openalex.org/W1972987731","https://openalex.org/W1975900269","https://openalex.org/W1976564639","https://openalex.org/W1978491237","https://openalex.org/W1987371344","https://openalex.org/W1988078905","https://openalex.org/W1993895874","https://openalex.org/W1998842747","https://openalex.org/W2000771269","https://openalex.org/W2007293574","https://openalex.org/W2008929650","https://openalex.org/W2009815126","https://openalex.org/W2012339972","https://openalex.org/W2015596806","https://openalex.org/W2016474243","https://openalex.org/W2019176983","https://openalex.org/W2020286436","https://openalex.org/W2021733365","https://openalex.org/W2022335352","https://openalex.org/W2031821463","https://openalex.org/W2033585005","https://openalex.org/W2041824185","https://openalex.org/W2063978378","https://openalex.org/W2087073799","https://openalex.org/W2087883561","https://openalex.org/W2090782670","https://openalex.org/W2093109772","https://openalex.org/W2097413644","https://openalex.org/W2101095383","https://openalex.org/W2102760656","https://openalex.org/W2106161928","https://openalex.org/W2109131717","https://openalex.org/W2109242212","https://openalex.org/W2113328646","https://openalex.org/W2113348061","https://openalex.org/W2113600901","https://openalex.org/W2121180632","https://openalex.org/W2122825543","https://openalex.org/W2123664981","https://openalex.org/W2123672572","https://openalex.org/W2129925362","https://openalex.org/W2135046866","https://openalex.org/W2139269942","https://openalex.org/W2146320559","https://openalex.org/W2147246240","https://openalex.org/W2148487094","https://openalex.org/W2149199519","https://openalex.org/W2152325091","https://openalex.org/W2157076315","https://openalex.org/W2158497151","https://openalex.org/W2159370862","https://openalex.org/W2160571019","https://openalex.org/W2163563958","https://openalex.org/W2170077348","https://openalex.org/W2170917242","https://openalex.org/W2184391221","https://openalex.org/W2728589967","https://openalex.org/W2989110006","https://openalex.org/W3147894994","https://openalex.org/W4248713933","https://openalex.org/W4301341292","https://openalex.org/W6600148170","https://openalex.org/W6601450353","https://openalex.org/W6637563840","https://openalex.org/W6676664377","https://openalex.org/W6680508596","https://openalex.org/W6681829401","https://openalex.org/W6686649634","https://openalex.org/W6740573145"],"related_works":["https://openalex.org/W2468272465","https://openalex.org/W2429564919","https://openalex.org/W757986597","https://openalex.org/W4212910148","https://openalex.org/W4213314600","https://openalex.org/W4210804200","https://openalex.org/W4399551893","https://openalex.org/W2954774635","https://openalex.org/W4392841950","https://openalex.org/W3123944750"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2025,"cited_by_count":16},{"year":2024,"cited_by_count":19},{"year":2023,"cited_by_count":6},{"year":2022,"cited_by_count":7},{"year":2021,"cited_by_count":5},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":4},{"year":2018,"cited_by_count":3},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":2}],"updated_date":"2026-03-04T09:10:02.777135","created_date":"2025-10-10T00:00:00"}