{"id":"https://openalex.org/W2115643606","doi":"https://doi.org/10.1093/bioinformatics/btu524","title":"BioTextQuest + : a knowledge integration platform for literature mining and concept discovery","display_name":"BioTextQuest + : a knowledge integration platform for literature mining and concept discovery","publication_year":2014,"publication_date":"2014-08-06","ids":{"openalex":"https://openalex.org/W2115643606","doi":"https://doi.org/10.1093/bioinformatics/btu524","mag":"2115643606","pmid":"https://pubmed.ncbi.nlm.nih.gov/25100685"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btu524","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btu524","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/30/22/3249/48930990/bioinformatics_30_22_3249.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/30/22/3249/48930990/bioinformatics_30_22_3249.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5077853417","display_name":"Nikolas Papanikolaou","orcid":null},"institutions":[{"id":"https://openalex.org/I142617266","display_name":"University of Crete","ror":"https://ror.org/00dr28g20","country_code":"GR","type":"education","lineage":["https://openalex.org/I142617266"]},{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]},{"id":"https://openalex.org/I34771391","display_name":"University of Cyprus","ror":"https://ror.org/02qjrjx09","country_code":"CY","type":"education","lineage":["https://openalex.org/I34771391"]},{"id":"https://openalex.org/I4210131924","display_name":"Hellenic Centre for Marine Research","ror":"https://ror.org/038kffh84","country_code":"GR","type":"facility","lineage":["https://openalex.org/I4210131924"]},{"id":"https://openalex.org/I4210134249","display_name":"Centre for Research and Technology Hellas","ror":"https://ror.org/03bndpq63","country_code":"GR","type":"facility","lineage":["https://openalex.org/I4210134249"]},{"id":"https://openalex.org/I8901234","display_name":"Foundation for Research and Technology Hellas","ror":"https://ror.org/052rphn09","country_code":"GR","type":"facility","lineage":["https://openalex.org/I8901234"]}],"countries":["CY","GR","LU"],"is_corresponding":true,"raw_author_name":"Nikolas Papanikolaou","raw_affiliation_strings":["1 Division of Basic Sciences, University of Crete, Medical School, Heraklion 71110, Greece, 2 Institute of Marine Biology, Biotechnology and Aquaculture (IMBBC), Hellenic Centre for Marine Research (HCMR), Heraklion, Greece, 3 Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg, Campus Belval, 7, avenue des Hauts-Fourneaux, L-4362 Esch sur Alzette, Luxembourg, 4 Biological Computation & Process Laboratory (BCPL), Chemical Process & Energy Resources Institute (CPERI), Centre for Research & Technology Hellas (CERTH), PO Box 361, GR-57001 Thessalonica, Greece, 5 Donnelly Centre for Cellular & Biomolecular Research, University of Toronto, Toronto, Ontario, Canada, 6 Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology Hellas, 70013 Heraklion, Crete, Greece and 7 Department of Biological Sciences, Bioinformatics Research Laboratory, University of Cyprus, PO Box 20537, CY 1678, Nicosia, Cyprus"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Division of Basic Sciences, University of Crete, Medical School, Heraklion 71110, Greece, 2 Institute of Marine Biology, Biotechnology and Aquaculture (IMBBC), Hellenic Centre for Marine Research (HCMR), Heraklion, Greece, 3 Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg, Campus Belval, 7, avenue des Hauts-Fourneaux, L-4362 Esch sur Alzette, Luxembourg, 4 Biological Computation & Process Laboratory (BCPL), Chemical Process & Energy Resources Institute (CPERI), Centre for Research & Technology Hellas (CERTH), PO Box 361, GR-57001 Thessalonica, Greece, 5 Donnelly Centre for Cellular & Biomolecular Research, University of Toronto, Toronto, Ontario, Canada, 6 Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology Hellas, 70013 Heraklion, Crete, Greece and 7 Department of Biological Sciences, Bioinformatics Research Laboratory, University of Cyprus, PO Box 20537, CY 1678, Nicosia, Cyprus","institution_ids":["https://openalex.org/I186903577","https://openalex.org/I142617266","https://openalex.org/I34771391","https://openalex.org/I4210131924","https://openalex.org/I4210134249","https://openalex.org/I8901234"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088991393","display_name":"Georgios A. Pavlopoulos","orcid":"https://orcid.org/0000-0002-4577-8276"},"institutions":[{"id":"https://openalex.org/I142617266","display_name":"University of Crete","ror":"https://ror.org/00dr28g20","country_code":"GR","type":"education","lineage":["https://openalex.org/I142617266"]},{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]},{"id":"https://openalex.org/I34771391","display_name":"University of Cyprus","ror":"https://ror.org/02qjrjx09","country_code":"CY","type":"education","lineage":["https://openalex.org/I34771391"]},{"id":"https://openalex.org/I4210131924","display_name":"Hellenic Centre for Marine Research","ror":"https://ror.org/038kffh84","country_code":"GR","type":"facility","lineage":["https://openalex.org/I4210131924"]},{"id":"https://openalex.org/I4210134249","display_name":"Centre for Research and Technology Hellas","ror":"https://ror.org/03bndpq63","country_code":"GR","type":"facility","lineage":["https://openalex.org/I4210134249"]},{"id":"https://openalex.org/I8901234","display_name":"Foundation for Research and Technology Hellas","ror":"https://ror.org/052rphn09","country_code":"GR","type":"facility","lineage":["https://openalex.org/I8901234"]}],"countries":["CY","GR","LU"],"is_corresponding":false,"raw_author_name":"Georgios A. Pavlopoulos","raw_affiliation_strings":["1 Division of Basic Sciences, University of Crete, Medical School, Heraklion 71110, Greece, 2 Institute of Marine Biology, Biotechnology and Aquaculture (IMBBC), Hellenic Centre for Marine Research (HCMR), Heraklion, Greece, 3 Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg, Campus Belval, 7, avenue des Hauts-Fourneaux, L-4362 Esch sur Alzette, Luxembourg, 4 Biological Computation & Process Laboratory (BCPL), Chemical Process & Energy Resources Institute (CPERI), Centre for Research & Technology Hellas (CERTH), PO Box 361, GR-57001 Thessalonica, Greece, 5 Donnelly Centre for Cellular & Biomolecular Research, University of Toronto, Toronto, Ontario, Canada, 6 Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology Hellas, 70013 Heraklion, Crete, Greece and 7 Department of Biological Sciences, Bioinformatics Research Laboratory, University of Cyprus, PO Box 20537, CY 1678, Nicosia, Cyprus"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Division of Basic Sciences, University of Crete, Medical School, Heraklion 71110, Greece, 2 Institute of Marine Biology, Biotechnology and Aquaculture (IMBBC), Hellenic Centre for Marine Research (HCMR), Heraklion, Greece, 3 Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg, Campus Belval, 7, avenue des Hauts-Fourneaux, L-4362 Esch sur Alzette, Luxembourg, 4 Biological Computation & Process Laboratory (BCPL), Chemical Process & Energy Resources Institute (CPERI), Centre for Research & Technology Hellas (CERTH), PO Box 361, GR-57001 Thessalonica, Greece, 5 Donnelly Centre for Cellular & Biomolecular Research, University of Toronto, Toronto, Ontario, Canada, 6 Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology Hellas, 70013 Heraklion, Crete, Greece and 7 Department of Biological Sciences, Bioinformatics Research Laboratory, University of Cyprus, PO Box 20537, CY 1678, Nicosia, Cyprus","institution_ids":["https://openalex.org/I186903577","https://openalex.org/I142617266","https://openalex.org/I34771391","https://openalex.org/I4210131924","https://openalex.org/I4210134249","https://openalex.org/I8901234"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025850900","display_name":"Evangelos Pafilis","orcid":"https://orcid.org/0000-0001-5079-0125"},"institutions":[{"id":"https://openalex.org/I142617266","display_name":"University of Crete","ror":"https://ror.org/00dr28g20","country_code":"GR","type":"education","lineage":["https://openalex.org/I142617266"]},{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]},{"id":"https://openalex.org/I34771391","display_name":"University of Cyprus","ror":"https://ror.org/02qjrjx09","country_code":"CY","type":"education","lineage":["https://openalex.org/I34771391"]},{"id":"https://openalex.org/I4210131924","display_name":"Hellenic Centre for Marine Research","ror":"https://ror.org/038kffh84","country_code":"GR","type":"facility","lineage":["https://openalex.org/I4210131924"]},{"id":"https://openalex.org/I4210134249","display_name":"Centre for Research and Technology Hellas","ror":"https://ror.org/03bndpq63","country_code":"GR","type":"facility","lineage":["https://openalex.org/I4210134249"]},{"id":"https://openalex.org/I8901234","display_name":"Foundation for Research and Technology Hellas","ror":"https://ror.org/052rphn09","country_code":"GR","type":"facility","lineage":["https://openalex.org/I8901234"]}],"countries":["CY","GR","LU"],"is_corresponding":false,"raw_author_name":"Evangelos Pafilis","raw_affiliation_strings":["1 Division of Basic Sciences, University of Crete, Medical School, Heraklion 71110, Greece, 2 Institute of Marine Biology, Biotechnology and Aquaculture (IMBBC), Hellenic Centre for Marine Research (HCMR), Heraklion, Greece, 3 Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg, Campus Belval, 7, avenue des Hauts-Fourneaux, L-4362 Esch sur Alzette, Luxembourg, 4 Biological Computation & Process Laboratory (BCPL), Chemical Process & Energy Resources Institute (CPERI), Centre for Research & Technology Hellas (CERTH), PO Box 361, GR-57001 Thessalonica, Greece, 5 Donnelly Centre for Cellular & Biomolecular Research, University of Toronto, Toronto, Ontario, Canada, 6 Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology Hellas, 70013 Heraklion, Crete, Greece and 7 Department of Biological Sciences, Bioinformatics Research Laboratory, University of Cyprus, PO Box 20537, CY 1678, Nicosia, Cyprus"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Division of Basic Sciences, University of Crete, Medical School, Heraklion 71110, Greece, 2 Institute of Marine Biology, Biotechnology and Aquaculture (IMBBC), Hellenic Centre for Marine Research (HCMR), Heraklion, Greece, 3 Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg, Campus Belval, 7, avenue des Hauts-Fourneaux, L-4362 Esch sur Alzette, Luxembourg, 4 Biological Computation & Process Laboratory (BCPL), Chemical Process & Energy Resources Institute (CPERI), Centre for Research & Technology Hellas (CERTH), PO Box 361, GR-57001 Thessalonica, Greece, 5 Donnelly Centre for Cellular & Biomolecular Research, University of Toronto, Toronto, Ontario, Canada, 6 Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology Hellas, 70013 Heraklion, Crete, Greece and 7 Department of Biological Sciences, Bioinformatics Research Laboratory, University of Cyprus, PO Box 20537, CY 1678, Nicosia, Cyprus","institution_ids":["https://openalex.org/I186903577","https://openalex.org/I142617266","https://openalex.org/I34771391","https://openalex.org/I4210131924","https://openalex.org/I4210134249","https://openalex.org/I8901234"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102882884","display_name":"\u0398\u03b5\u03bf\u03b4\u03cc\u03c3\u03b9\u03bf\u03c2 \u0398\u03b5\u03bf\u03b4\u03bf\u03c3\u03af\u03bf\u03c5","orcid":"https://orcid.org/0000-0002-6151-1803"},"institutions":[{"id":"https://openalex.org/I142617266","display_name":"University of Crete","ror":"https://ror.org/00dr28g20","country_code":"GR","type":"education","lineage":["https://openalex.org/I142617266"]},{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]},{"id":"https://openalex.org/I34771391","display_name":"University of Cyprus","ror":"https://ror.org/02qjrjx09","country_code":"CY","type":"education","lineage":["https://openalex.org/I34771391"]},{"id":"https://openalex.org/I4210131924","display_name":"Hellenic Centre for Marine Research","ror":"https://ror.org/038kffh84","country_code":"GR","type":"facility","lineage":["https://openalex.org/I4210131924"]},{"id":"https://openalex.org/I4210134249","display_name":"Centre for Research and Technology Hellas","ror":"https://ror.org/03bndpq63","country_code":"GR","type":"facility","lineage":["https://openalex.org/I4210134249"]},{"id":"https://openalex.org/I8901234","display_name":"Foundation for Research and Technology Hellas","ror":"https://ror.org/052rphn09","country_code":"GR","type":"facility","lineage":["https://openalex.org/I8901234"]}],"countries":["CY","GR","LU"],"is_corresponding":false,"raw_author_name":"Theodosios Theodosiou","raw_affiliation_strings":["1 Division of Basic Sciences, University of Crete, Medical School, Heraklion 71110, Greece, 2 Institute of Marine Biology, Biotechnology and Aquaculture (IMBBC), Hellenic Centre for Marine Research (HCMR), Heraklion, Greece, 3 Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg, Campus Belval, 7, avenue des Hauts-Fourneaux, L-4362 Esch sur Alzette, Luxembourg, 4 Biological Computation & Process Laboratory (BCPL), Chemical Process & Energy Resources Institute (CPERI), Centre for Research & Technology Hellas (CERTH), PO Box 361, GR-57001 Thessalonica, Greece, 5 Donnelly Centre for Cellular & Biomolecular Research, University of Toronto, Toronto, Ontario, Canada, 6 Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology Hellas, 70013 Heraklion, Crete, Greece and 7 Department of Biological Sciences, Bioinformatics Research Laboratory, University of Cyprus, PO Box 20537, CY 1678, Nicosia, Cyprus"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Division of Basic Sciences, University of Crete, Medical School, Heraklion 71110, Greece, 2 Institute of Marine Biology, Biotechnology and Aquaculture (IMBBC), Hellenic Centre for Marine Research (HCMR), Heraklion, Greece, 3 Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg, Campus Belval, 7, avenue des Hauts-Fourneaux, L-4362 Esch sur Alzette, Luxembourg, 4 Biological Computation & Process Laboratory (BCPL), Chemical Process & Energy Resources Institute (CPERI), Centre for Research & Technology Hellas (CERTH), PO Box 361, GR-57001 Thessalonica, Greece, 5 Donnelly Centre for Cellular & Biomolecular Research, University of Toronto, Toronto, Ontario, Canada, 6 Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology Hellas, 70013 Heraklion, Crete, Greece and 7 Department of Biological Sciences, Bioinformatics Research Laboratory, University of Cyprus, PO Box 20537, CY 1678, Nicosia, Cyprus","institution_ids":["https://openalex.org/I186903577","https://openalex.org/I142617266","https://openalex.org/I34771391","https://openalex.org/I4210131924","https://openalex.org/I4210134249","https://openalex.org/I8901234"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079833473","display_name":"Reinhard Schneider","orcid":"https://orcid.org/0000-0002-8278-1618"},"institutions":[{"id":"https://openalex.org/I142617266","display_name":"University of Crete","ror":"https://ror.org/00dr28g20","country_code":"GR","type":"education","lineage":["https://openalex.org/I142617266"]},{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]},{"id":"https://openalex.org/I34771391","display_name":"University of Cyprus","ror":"https://ror.org/02qjrjx09","country_code":"CY","type":"education","lineage":["https://openalex.org/I34771391"]},{"id":"https://openalex.org/I4210131924","display_name":"Hellenic Centre for Marine Research","ror":"https://ror.org/038kffh84","country_code":"GR","type":"facility","lineage":["https://openalex.org/I4210131924"]},{"id":"https://openalex.org/I4210134249","display_name":"Centre for Research and Technology Hellas","ror":"https://ror.org/03bndpq63","country_code":"GR","type":"facility","lineage":["https://openalex.org/I4210134249"]},{"id":"https://openalex.org/I8901234","display_name":"Foundation for Research and Technology Hellas","ror":"https://ror.org/052rphn09","country_code":"GR","type":"facility","lineage":["https://openalex.org/I8901234"]}],"countries":["CY","GR","LU"],"is_corresponding":false,"raw_author_name":"Reinhard Schneider","raw_affiliation_strings":["1 Division of Basic Sciences, University of Crete, Medical School, Heraklion 71110, Greece, 2 Institute of Marine Biology, Biotechnology and Aquaculture (IMBBC), Hellenic Centre for Marine Research (HCMR), Heraklion, Greece, 3 Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg, Campus Belval, 7, avenue des Hauts-Fourneaux, L-4362 Esch sur Alzette, Luxembourg, 4 Biological Computation & Process Laboratory (BCPL), Chemical Process & Energy Resources Institute (CPERI), Centre for Research & Technology Hellas (CERTH), PO Box 361, GR-57001 Thessalonica, Greece, 5 Donnelly Centre for Cellular & Biomolecular Research, University of Toronto, Toronto, Ontario, Canada, 6 Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology Hellas, 70013 Heraklion, Crete, Greece and 7 Department of Biological Sciences, Bioinformatics Research Laboratory, University of Cyprus, PO Box 20537, CY 1678, Nicosia, Cyprus"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Division of Basic Sciences, University of Crete, Medical School, Heraklion 71110, Greece, 2 Institute of Marine Biology, Biotechnology and Aquaculture (IMBBC), Hellenic Centre for Marine Research (HCMR), Heraklion, Greece, 3 Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg, Campus Belval, 7, avenue des Hauts-Fourneaux, L-4362 Esch sur Alzette, Luxembourg, 4 Biological Computation & Process Laboratory (BCPL), Chemical Process & Energy Resources Institute (CPERI), Centre for Research & Technology Hellas (CERTH), PO Box 361, GR-57001 Thessalonica, Greece, 5 Donnelly Centre for Cellular & Biomolecular Research, University of Toronto, Toronto, Ontario, Canada, 6 Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology Hellas, 70013 Heraklion, Crete, Greece and 7 Department of Biological Sciences, Bioinformatics Research Laboratory, University of Cyprus, PO Box 20537, CY 1678, Nicosia, Cyprus","institution_ids":["https://openalex.org/I186903577","https://openalex.org/I142617266","https://openalex.org/I34771391","https://openalex.org/I4210131924","https://openalex.org/I4210134249","https://openalex.org/I8901234"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088017410","display_name":"Venkata Satagopam","orcid":"https://orcid.org/0000-0002-6532-5880"},"institutions":[{"id":"https://openalex.org/I142617266","display_name":"University of Crete","ror":"https://ror.org/00dr28g20","country_code":"GR","type":"education","lineage":["https://openalex.org/I142617266"]},{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]},{"id":"https://openalex.org/I34771391","display_name":"University of Cyprus","ror":"https://ror.org/02qjrjx09","country_code":"CY","type":"education","lineage":["https://openalex.org/I34771391"]},{"id":"https://openalex.org/I4210131924","display_name":"Hellenic Centre for Marine Research","ror":"https://ror.org/038kffh84","country_code":"GR","type":"facility","lineage":["https://openalex.org/I4210131924"]},{"id":"https://openalex.org/I4210134249","display_name":"Centre for Research and Technology Hellas","ror":"https://ror.org/03bndpq63","country_code":"GR","type":"facility","lineage":["https://openalex.org/I4210134249"]},{"id":"https://openalex.org/I8901234","display_name":"Foundation for Research and Technology Hellas","ror":"https://ror.org/052rphn09","country_code":"GR","type":"facility","lineage":["https://openalex.org/I8901234"]}],"countries":["CY","GR","LU"],"is_corresponding":false,"raw_author_name":"Venkata P. Satagopam","raw_affiliation_strings":["1 Division of Basic Sciences, University of Crete, Medical School, Heraklion 71110, Greece, 2 Institute of Marine Biology, Biotechnology and Aquaculture (IMBBC), Hellenic Centre for Marine Research (HCMR), Heraklion, Greece, 3 Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg, Campus Belval, 7, avenue des Hauts-Fourneaux, L-4362 Esch sur Alzette, Luxembourg, 4 Biological Computation & Process Laboratory (BCPL), Chemical Process & Energy Resources Institute (CPERI), Centre for Research & Technology Hellas (CERTH), PO Box 361, GR-57001 Thessalonica, Greece, 5 Donnelly Centre for Cellular & Biomolecular Research, University of Toronto, Toronto, Ontario, Canada, 6 Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology Hellas, 70013 Heraklion, Crete, Greece and 7 Department of Biological Sciences, Bioinformatics Research Laboratory, University of Cyprus, PO Box 20537, CY 1678, Nicosia, Cyprus"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Division of Basic Sciences, University of Crete, Medical School, Heraklion 71110, Greece, 2 Institute of Marine Biology, Biotechnology and Aquaculture (IMBBC), Hellenic Centre for Marine Research (HCMR), Heraklion, Greece, 3 Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg, Campus Belval, 7, avenue des Hauts-Fourneaux, L-4362 Esch sur Alzette, Luxembourg, 4 Biological Computation & Process Laboratory (BCPL), Chemical Process & Energy Resources Institute (CPERI), Centre for Research & Technology Hellas (CERTH), PO Box 361, GR-57001 Thessalonica, Greece, 5 Donnelly Centre for Cellular & Biomolecular Research, University of Toronto, Toronto, Ontario, Canada, 6 Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology Hellas, 70013 Heraklion, Crete, Greece and 7 Department of Biological Sciences, Bioinformatics Research Laboratory, University of Cyprus, PO Box 20537, CY 1678, Nicosia, Cyprus","institution_ids":["https://openalex.org/I186903577","https://openalex.org/I142617266","https://openalex.org/I34771391","https://openalex.org/I4210131924","https://openalex.org/I4210134249","https://openalex.org/I8901234"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022717154","display_name":"Christos Ouzounis","orcid":"https://orcid.org/0000-0002-0086-8657"},"institutions":[{"id":"https://openalex.org/I142617266","display_name":"University of Crete","ror":"https://ror.org/00dr28g20","country_code":"GR","type":"education","lineage":["https://openalex.org/I142617266"]},{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]},{"id":"https://openalex.org/I34771391","display_name":"University of Cyprus","ror":"https://ror.org/02qjrjx09","country_code":"CY","type":"education","lineage":["https://openalex.org/I34771391"]},{"id":"https://openalex.org/I4210131924","display_name":"Hellenic Centre for Marine Research","ror":"https://ror.org/038kffh84","country_code":"GR","type":"facility","lineage":["https://openalex.org/I4210131924"]},{"id":"https://openalex.org/I4210134249","display_name":"Centre for Research and Technology Hellas","ror":"https://ror.org/03bndpq63","country_code":"GR","type":"facility","lineage":["https://openalex.org/I4210134249"]},{"id":"https://openalex.org/I8901234","display_name":"Foundation for Research and Technology Hellas","ror":"https://ror.org/052rphn09","country_code":"GR","type":"facility","lineage":["https://openalex.org/I8901234"]}],"countries":["CY","GR","LU"],"is_corresponding":false,"raw_author_name":"Christos A. Ouzounis","raw_affiliation_strings":["1 Division of Basic Sciences, University of Crete, Medical School, Heraklion 71110, Greece, 2 Institute of Marine Biology, Biotechnology and Aquaculture (IMBBC), Hellenic Centre for Marine Research (HCMR), Heraklion, Greece, 3 Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg, Campus Belval, 7, avenue des Hauts-Fourneaux, L-4362 Esch sur Alzette, Luxembourg, 4 Biological Computation & Process Laboratory (BCPL), Chemical Process & Energy Resources Institute (CPERI), Centre for Research & Technology Hellas (CERTH), PO Box 361, GR-57001 Thessalonica, Greece, 5 Donnelly Centre for Cellular & Biomolecular Research, University of Toronto, Toronto, Ontario, Canada, 6 Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology Hellas, 70013 Heraklion, Crete, Greece and 7 Department of Biological Sciences, Bioinformatics Research Laboratory, University of Cyprus, PO Box 20537, CY 1678, Nicosia, Cyprus"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Division of Basic Sciences, University of Crete, Medical School, Heraklion 71110, Greece, 2 Institute of Marine Biology, Biotechnology and Aquaculture (IMBBC), Hellenic Centre for Marine Research (HCMR), Heraklion, Greece, 3 Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg, Campus Belval, 7, avenue des Hauts-Fourneaux, L-4362 Esch sur Alzette, Luxembourg, 4 Biological Computation & Process Laboratory (BCPL), Chemical Process & Energy Resources Institute (CPERI), Centre for Research & Technology Hellas (CERTH), PO Box 361, GR-57001 Thessalonica, Greece, 5 Donnelly Centre for Cellular & Biomolecular Research, University of Toronto, Toronto, Ontario, Canada, 6 Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology Hellas, 70013 Heraklion, Crete, Greece and 7 Department of Biological Sciences, Bioinformatics Research Laboratory, University of Cyprus, PO Box 20537, CY 1678, Nicosia, Cyprus","institution_ids":["https://openalex.org/I186903577","https://openalex.org/I142617266","https://openalex.org/I34771391","https://openalex.org/I4210131924","https://openalex.org/I4210134249","https://openalex.org/I8901234"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071694950","display_name":"Aristides G. Eliopoulos","orcid":"https://orcid.org/0000-0002-6403-6761"},"institutions":[{"id":"https://openalex.org/I142617266","display_name":"University of Crete","ror":"https://ror.org/00dr28g20","country_code":"GR","type":"education","lineage":["https://openalex.org/I142617266"]},{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]},{"id":"https://openalex.org/I34771391","display_name":"University of Cyprus","ror":"https://ror.org/02qjrjx09","country_code":"CY","type":"education","lineage":["https://openalex.org/I34771391"]},{"id":"https://openalex.org/I4210131924","display_name":"Hellenic Centre for Marine Research","ror":"https://ror.org/038kffh84","country_code":"GR","type":"facility","lineage":["https://openalex.org/I4210131924"]},{"id":"https://openalex.org/I4210134249","display_name":"Centre for Research and Technology Hellas","ror":"https://ror.org/03bndpq63","country_code":"GR","type":"facility","lineage":["https://openalex.org/I4210134249"]},{"id":"https://openalex.org/I8901234","display_name":"Foundation for Research and Technology Hellas","ror":"https://ror.org/052rphn09","country_code":"GR","type":"facility","lineage":["https://openalex.org/I8901234"]}],"countries":["CY","GR","LU"],"is_corresponding":false,"raw_author_name":"Aristides G. Eliopoulos","raw_affiliation_strings":["1 Division of Basic Sciences, University of Crete, Medical School, Heraklion 71110, Greece, 2 Institute of Marine Biology, Biotechnology and Aquaculture (IMBBC), Hellenic Centre for Marine Research (HCMR), Heraklion, Greece, 3 Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg, Campus Belval, 7, avenue des Hauts-Fourneaux, L-4362 Esch sur Alzette, Luxembourg, 4 Biological Computation & Process Laboratory (BCPL), Chemical Process & Energy Resources Institute (CPERI), Centre for Research & Technology Hellas (CERTH), PO Box 361, GR-57001 Thessalonica, Greece, 5 Donnelly Centre for Cellular & Biomolecular Research, University of Toronto, Toronto, Ontario, Canada, 6 Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology Hellas, 70013 Heraklion, Crete, Greece and 7 Department of Biological Sciences, Bioinformatics Research Laboratory, University of Cyprus, PO Box 20537, CY 1678, Nicosia, Cyprus"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Division of Basic Sciences, University of Crete, Medical School, Heraklion 71110, Greece, 2 Institute of Marine Biology, Biotechnology and Aquaculture (IMBBC), Hellenic Centre for Marine Research (HCMR), Heraklion, Greece, 3 Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg, Campus Belval, 7, avenue des Hauts-Fourneaux, L-4362 Esch sur Alzette, Luxembourg, 4 Biological Computation & Process Laboratory (BCPL), Chemical Process & Energy Resources Institute (CPERI), Centre for Research & Technology Hellas (CERTH), PO Box 361, GR-57001 Thessalonica, Greece, 5 Donnelly Centre for Cellular & Biomolecular Research, University of Toronto, Toronto, Ontario, Canada, 6 Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology Hellas, 70013 Heraklion, Crete, Greece and 7 Department of Biological Sciences, Bioinformatics Research Laboratory, University of Cyprus, PO Box 20537, CY 1678, Nicosia, Cyprus","institution_ids":["https://openalex.org/I186903577","https://openalex.org/I142617266","https://openalex.org/I34771391","https://openalex.org/I4210131924","https://openalex.org/I4210134249","https://openalex.org/I8901234"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070268749","display_name":"Vasilis J. Promponas","orcid":"https://orcid.org/0000-0003-3352-4831"},"institutions":[{"id":"https://openalex.org/I142617266","display_name":"University of Crete","ror":"https://ror.org/00dr28g20","country_code":"GR","type":"education","lineage":["https://openalex.org/I142617266"]},{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]},{"id":"https://openalex.org/I34771391","display_name":"University of Cyprus","ror":"https://ror.org/02qjrjx09","country_code":"CY","type":"education","lineage":["https://openalex.org/I34771391"]},{"id":"https://openalex.org/I4210131924","display_name":"Hellenic Centre for Marine Research","ror":"https://ror.org/038kffh84","country_code":"GR","type":"facility","lineage":["https://openalex.org/I4210131924"]},{"id":"https://openalex.org/I4210134249","display_name":"Centre for Research and Technology Hellas","ror":"https://ror.org/03bndpq63","country_code":"GR","type":"facility","lineage":["https://openalex.org/I4210134249"]},{"id":"https://openalex.org/I8901234","display_name":"Foundation for Research and Technology Hellas","ror":"https://ror.org/052rphn09","country_code":"GR","type":"facility","lineage":["https://openalex.org/I8901234"]}],"countries":["CY","GR","LU"],"is_corresponding":false,"raw_author_name":"Vasilis J. Promponas","raw_affiliation_strings":["1 Division of Basic Sciences, University of Crete, Medical School, Heraklion 71110, Greece, 2 Institute of Marine Biology, Biotechnology and Aquaculture (IMBBC), Hellenic Centre for Marine Research (HCMR), Heraklion, Greece, 3 Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg, Campus Belval, 7, avenue des Hauts-Fourneaux, L-4362 Esch sur Alzette, Luxembourg, 4 Biological Computation & Process Laboratory (BCPL), Chemical Process & Energy Resources Institute (CPERI), Centre for Research & Technology Hellas (CERTH), PO Box 361, GR-57001 Thessalonica, Greece, 5 Donnelly Centre for Cellular & Biomolecular Research, University of Toronto, Toronto, Ontario, Canada, 6 Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology Hellas, 70013 Heraklion, Crete, Greece and 7 Department of Biological Sciences, Bioinformatics Research Laboratory, University of Cyprus, PO Box 20537, CY 1678, Nicosia, Cyprus"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Division of Basic Sciences, University of Crete, Medical School, Heraklion 71110, Greece, 2 Institute of Marine Biology, Biotechnology and Aquaculture (IMBBC), Hellenic Centre for Marine Research (HCMR), Heraklion, Greece, 3 Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg, Campus Belval, 7, avenue des Hauts-Fourneaux, L-4362 Esch sur Alzette, Luxembourg, 4 Biological Computation & Process Laboratory (BCPL), Chemical Process & Energy Resources Institute (CPERI), Centre for Research & Technology Hellas (CERTH), PO Box 361, GR-57001 Thessalonica, Greece, 5 Donnelly Centre for Cellular & Biomolecular Research, University of Toronto, Toronto, Ontario, Canada, 6 Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology Hellas, 70013 Heraklion, Crete, Greece and 7 Department of Biological Sciences, Bioinformatics Research Laboratory, University of Cyprus, PO Box 20537, CY 1678, Nicosia, Cyprus","institution_ids":["https://openalex.org/I186903577","https://openalex.org/I142617266","https://openalex.org/I34771391","https://openalex.org/I4210131924","https://openalex.org/I4210134249","https://openalex.org/I8901234"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5054328679","display_name":"Ioannis Iliopoulos","orcid":"https://orcid.org/0000-0002-8965-9535"},"institutions":[{"id":"https://openalex.org/I142617266","display_name":"University of Crete","ror":"https://ror.org/00dr28g20","country_code":"GR","type":"education","lineage":["https://openalex.org/I142617266"]},{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]},{"id":"https://openalex.org/I34771391","display_name":"University of Cyprus","ror":"https://ror.org/02qjrjx09","country_code":"CY","type":"education","lineage":["https://openalex.org/I34771391"]},{"id":"https://openalex.org/I4210131924","display_name":"Hellenic Centre for Marine Research","ror":"https://ror.org/038kffh84","country_code":"GR","type":"facility","lineage":["https://openalex.org/I4210131924"]},{"id":"https://openalex.org/I4210134249","display_name":"Centre for Research and Technology Hellas","ror":"https://ror.org/03bndpq63","country_code":"GR","type":"facility","lineage":["https://openalex.org/I4210134249"]},{"id":"https://openalex.org/I8901234","display_name":"Foundation for Research and Technology Hellas","ror":"https://ror.org/052rphn09","country_code":"GR","type":"facility","lineage":["https://openalex.org/I8901234"]}],"countries":["CY","GR","LU"],"is_corresponding":false,"raw_author_name":"Ioannis Iliopoulos","raw_affiliation_strings":["1 Division of Basic Sciences, University of Crete, Medical School, Heraklion 71110, Greece, 2 Institute of Marine Biology, Biotechnology and Aquaculture (IMBBC), Hellenic Centre for Marine Research (HCMR), Heraklion, Greece, 3 Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg, Campus Belval, 7, avenue des Hauts-Fourneaux, L-4362 Esch sur Alzette, Luxembourg, 4 Biological Computation & Process Laboratory (BCPL), Chemical Process & Energy Resources Institute (CPERI), Centre for Research & Technology Hellas (CERTH), PO Box 361, GR-57001 Thessalonica, Greece, 5 Donnelly Centre for Cellular & Biomolecular Research, University of Toronto, Toronto, Ontario, Canada, 6 Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology Hellas, 70013 Heraklion, Crete, Greece and 7 Department of Biological Sciences, Bioinformatics Research Laboratory, University of Cyprus, PO Box 20537, CY 1678, Nicosia, Cyprus"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Division of Basic Sciences, University of Crete, Medical School, Heraklion 71110, Greece, 2 Institute of Marine Biology, Biotechnology and Aquaculture (IMBBC), Hellenic Centre for Marine Research (HCMR), Heraklion, Greece, 3 Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg, Campus Belval, 7, avenue des Hauts-Fourneaux, L-4362 Esch sur Alzette, Luxembourg, 4 Biological Computation & Process Laboratory (BCPL), Chemical Process & Energy Resources Institute (CPERI), Centre for Research & Technology Hellas (CERTH), PO Box 361, GR-57001 Thessalonica, Greece, 5 Donnelly Centre for Cellular & Biomolecular Research, University of Toronto, Toronto, Ontario, Canada, 6 Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology Hellas, 70013 Heraklion, Crete, Greece and 7 Department of Biological Sciences, Bioinformatics Research Laboratory, University of Cyprus, PO Box 20537, CY 1678, Nicosia, Cyprus","institution_ids":["https://openalex.org/I186903577","https://openalex.org/I142617266","https://openalex.org/I34771391","https://openalex.org/I4210131924","https://openalex.org/I4210134249","https://openalex.org/I8901234"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":10,"corresponding_author_ids":["https://openalex.org/A5077853417"],"corresponding_institution_ids":["https://openalex.org/I142617266","https://openalex.org/I186903577","https://openalex.org/I34771391","https://openalex.org/I4210131924","https://openalex.org/I4210134249","https://openalex.org/I8901234"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":1.1381,"has_fulltext":true,"cited_by_count":29,"citation_normalized_percentile":{"value":0.77784851,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"30","issue":"22","first_page":"3249","last_page":"3256"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9968000054359436,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9968000054359436,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.00039999998989515007,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T14427","display_name":"Environmental Monitoring and Data Management","score":0.0003000000142492354,"subfield":{"id":"https://openalex.org/subfields/1907","display_name":"Geology"},"field":{"id":"https://openalex.org/fields/19","display_name":"Earth and Planetary Sciences"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7753623723983765},{"id":"https://openalex.org/keywords/interface","display_name":"Interface (matter)","score":0.5721576809883118},{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.5694093704223633},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.5451960563659668},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.5215199589729309},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.5121369361877441},{"id":"https://openalex.org/keywords/biological-database","display_name":"Biological database","score":0.4452732503414154},{"id":"https://openalex.org/keywords/user-interface","display_name":"User interface","score":0.4387816786766052},{"id":"https://openalex.org/keywords/knowledge-extraction","display_name":"Knowledge extraction","score":0.4204917550086975},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.40944284200668335},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.37155431509017944},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.29798221588134766},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.2542734146118164},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.15298369526863098}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7753623723983765},{"id":"https://openalex.org/C113843644","wikidata":"https://www.wikidata.org/wiki/Q901882","display_name":"Interface (matter)","level":4,"score":0.5721576809883118},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.5694093704223633},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.5451960563659668},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.5215199589729309},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.5121369361877441},{"id":"https://openalex.org/C20901353","wikidata":"https://www.wikidata.org/wiki/Q4117139","display_name":"Biological database","level":2,"score":0.4452732503414154},{"id":"https://openalex.org/C89505385","wikidata":"https://www.wikidata.org/wiki/Q47146","display_name":"User interface","level":2,"score":0.4387816786766052},{"id":"https://openalex.org/C120567893","wikidata":"https://www.wikidata.org/wiki/Q1582085","display_name":"Knowledge extraction","level":2,"score":0.4204917550086975},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.40944284200668335},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.37155431509017944},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.29798221588134766},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.2542734146118164},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.15298369526863098},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C129307140","wikidata":"https://www.wikidata.org/wiki/Q6795880","display_name":"Maximum bubble pressure method","level":3,"score":0.0},{"id":"https://openalex.org/C157915830","wikidata":"https://www.wikidata.org/wiki/Q2928001","display_name":"Bubble","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D001319","descriptor_name":"Authorship","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001319","descriptor_name":"Authorship","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001319","descriptor_name":"Authorship","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011642","descriptor_name":"Publications","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011642","descriptor_name":"Publications","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011642","descriptor_name":"Publications","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D046650","descriptor_name":"Medical Subject Headings","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D046650","descriptor_name":"Medical Subject Headings","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D046650","descriptor_name":"Medical Subject Headings","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btu524","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btu524","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/30/22/3249/48930990/bioinformatics_30_22_3249.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:25100685","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25100685","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmid:25673338","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25673338","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:orbilu.uni.lu:10993/17936","is_oa":true,"landing_page_url":"https://orbilu.uni.lu/handle/10993/17936","pdf_url":null,"source":{"id":"https://openalex.org/S4306401815","display_name":"Open Repository and Bibliography (University of Luxembourg)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I186903577","host_organization_name":"University of Luxembourg","host_organization_lineage":["https://openalex.org/I186903577"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics. Oxford, United Kingdom: Oxford University Press - Journals Department (2014).","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btu524","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btu524","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/30/22/3249/48930990/bioinformatics_30_22_3249.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1130746086","display_name":null,"funder_award_id":"295552","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G1264997894","display_name":null,"funder_award_id":"285948","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G2505688645","display_name":null,"funder_award_id":"223151","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G7257051450","display_name":"The Microme Project: A Knowledge-Based Bioinformatics Framework for Microbial Pathway Genomics","funder_award_id":"222886","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G8741107302","display_name":"Supporting research potential for MARine BIodiversity and GENomics in the Eastern Mediterranean","funder_award_id":"264089","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"}],"funders":[{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2115643606.pdf","grobid_xml":"https://content.openalex.org/works/W2115643606.grobid-xml"},"referenced_works_count":86,"referenced_works":["https://openalex.org/W34965593","https://openalex.org/W48232070","https://openalex.org/W1601495365","https://openalex.org/W1886245244","https://openalex.org/W1964861583","https://openalex.org/W1969436613","https://openalex.org/W1970871693","https://openalex.org/W1981029985","https://openalex.org/W1986891966","https://openalex.org/W1987522618","https://openalex.org/W1991133017","https://openalex.org/W1992381544","https://openalex.org/W1993595811","https://openalex.org/W1995120392","https://openalex.org/W1996002274","https://openalex.org/W1996295408","https://openalex.org/W1998767819","https://openalex.org/W2001699795","https://openalex.org/W2009313526","https://openalex.org/W2016398181","https://openalex.org/W2025365931","https://openalex.org/W2028490774","https://openalex.org/W2031950862","https://openalex.org/W2032054503","https://openalex.org/W2033377040","https://openalex.org/W2035595423","https://openalex.org/W2041994355","https://openalex.org/W2051689038","https://openalex.org/W2051795211","https://openalex.org/W2053385401","https://openalex.org/W2057240659","https://openalex.org/W2057545775","https://openalex.org/W2070040136","https://openalex.org/W2073671190","https://openalex.org/W2074426357","https://openalex.org/W2086383321","https://openalex.org/W2091405727","https://openalex.org/W2093439972","https://openalex.org/W2095718954","https://openalex.org/W2096525273","https://openalex.org/W2096718637","https://openalex.org/W2101727078","https://openalex.org/W2103017472","https://openalex.org/W2103477204","https://openalex.org/W2106474670","https://openalex.org/W2106987717","https://openalex.org/W2107580398","https://openalex.org/W2108069034","https://openalex.org/W2108934940","https://openalex.org/W2109872885","https://openalex.org/W2110734043","https://openalex.org/W2112671334","https://openalex.org/W2119412782","https://openalex.org/W2124166542","https://openalex.org/W2127218421","https://openalex.org/W2127640118","https://openalex.org/W2130253098","https://openalex.org/W2130930065","https://openalex.org/W2131347449","https://openalex.org/W2132023322","https://openalex.org/W2132784310","https://openalex.org/W2135905351","https://openalex.org/W2137043679","https://openalex.org/W2142515600","https://openalex.org/W2145966577","https://openalex.org/W2146980885","https://openalex.org/W2147558260","https://openalex.org/W2147991226","https://openalex.org/W2153252192","https://openalex.org/W2157602407","https://openalex.org/W2159335058","https://openalex.org/W2159671926","https://openalex.org/W2161377381","https://openalex.org/W2162965868","https://openalex.org/W2164381236","https://openalex.org/W2165232124","https://openalex.org/W2166233246","https://openalex.org/W2169228179","https://openalex.org/W2170981556","https://openalex.org/W2397149926","https://openalex.org/W2915482286","https://openalex.org/W4210347168","https://openalex.org/W4230606671","https://openalex.org/W4231170962","https://openalex.org/W4239198058","https://openalex.org/W6602003867"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W4287890657","https://openalex.org/W2260803648","https://openalex.org/W2094305077","https://openalex.org/W2725657302","https://openalex.org/W2607871307","https://openalex.org/W2150967192","https://openalex.org/W1164761132","https://openalex.org/W3207383626","https://openalex.org/W2470124677"],"abstract_inverted_index":{"SUMMARY:":[0],"The":[1,113,175,224],"iterative":[2],"process":[3],"of":[4,29,35,90,100,119,126,131,159,186,196],"finding":[5],"relevant":[6,147],"information":[7,145],"in":[8,17],"biomedical":[9],"literature":[10,78],"and":[11,32,41,74,80,86,97,106,140,149,166,211,221],"performing":[12],"bioinformatics":[13,173],"analyses":[14],"might":[15],"result":[16],"an":[18,22],"endless":[19],"loop":[20],"for":[21,189],"inexperienced":[23],"user,":[24],"considering":[25],"the":[26,33,110,117,124,129,194],"exponential":[27],"growth":[28],"scientific":[30],"corpora":[31],"plethora":[34],"tools":[36,168],"designed":[37],"to":[38,58,63,93,152,170],"mine":[39],"PubMed(\u00ae)":[40],"related":[42,92],"biological":[43,107,164],"databases.":[44],"Herein,":[45],"we":[46],"describe":[47],"BioTextQuest(+),":[48],"a":[49,94,184],"web-based":[50],"interactive":[51],"knowledge":[52,209],"exploration":[53],"platform":[54],"with":[55,144,163],"significant":[56],"advances":[57],"its":[59,160],"predecessor":[60],"(BioTextQuest),":[61],"aiming":[62],"bridge":[64],"processes":[65,108],"such":[66,218],"as":[67,219],"bioentity":[68],"recognition,":[69],"functional":[70,206],"annotation,":[71],"document":[72,120],"clustering":[73,121],"data":[75,237],"integration":[76,158],"towards":[77],"mining":[79],"concept":[81,212],"discovery.":[82],"BioTextQuest(+)":[83,156,197],"enables":[84],"PubMed":[85],"OMIM":[87],"querying,":[88],"retrieval":[89],"abstracts":[91],"targeted":[95],"request":[96],"optimal":[98],"detection":[99],"genes,":[101],"proteins,":[102],"molecular":[103],"functions,":[104],"pathways":[105],"within":[109],"retrieved":[111],"documents.":[112],"front-end":[114],"interface":[115,177],"facilitates":[116],"browsing":[118],"per":[122,138],"subject,":[123],"analysis":[125],"term":[127,207],"co-occurrence,":[128],"generation":[130],"tag":[132],"clouds":[133],"containing":[134],"highly":[135],"represented":[136],"terms":[137],"cluster":[139],"at-a-glance":[141],"popup":[142],"windows":[143],"about":[146],"genes":[148],"proteins.":[150],"Moreover,":[151],"support":[153],"experimental":[154],"research,":[155],"addresses":[157],"primary":[161],"functionality":[162,195],"repositories":[165],"software":[167],"able":[169],"deliver":[171],"further":[172],"services.":[174],"Google-like":[176],"extends":[178],"beyond":[179],"simple":[180],"use":[181],"by":[182],"offering":[183],"range":[185],"advanced":[187],"parameterization":[188],"expert":[190],"users.":[191],"We":[192],"demonstrate":[193],"through":[198],"several":[199],"exemplary":[200],"research":[201],"scenarios":[202],"including":[203],"author":[204],"disambiguation,":[205],"enrichment,":[208],"acquisition":[210],"discovery":[213],"linking":[214],"major":[215],"human":[216],"diseases,":[217],"obesity":[220],"ageing.":[222],"AVAILABILITY:":[223],"service":[225],"is":[226],"accessible":[227],"at":[228,240],"http://bioinformatics.med.uoc.gr/biotextquest.":[229],"CONTACT:":[230],"g.pavlopoulos@gmail.com":[231],"or":[232],"georgios.pavlopoulos@esat.kuleuven.be":[233],"SUPPLEMENTARY":[234],"INFORMATION:":[235],"Supplementary":[236],"are":[238],"available":[239],"Bioinformatics":[241],"online.":[242]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":7},{"year":2021,"cited_by_count":4},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":4},{"year":2015,"cited_by_count":2}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
