{"id":"https://openalex.org/W2142295792","doi":"https://doi.org/10.1093/bioinformatics/btu522","title":"Individual-level analysis of differential expression of genes and pathways for personalized medicine","display_name":"Individual-level analysis of differential expression of genes and pathways for personalized medicine","publication_year":2014,"publication_date":"2014-08-26","ids":{"openalex":"https://openalex.org/W2142295792","doi":"https://doi.org/10.1093/bioinformatics/btu522","mag":"2142295792","pmid":"https://pubmed.ncbi.nlm.nih.gov/25165092"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btu522","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btu522","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/31/1/62/49011336/bioinformatics_31_1_62.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/31/1/62/49011336/bioinformatics_31_1_62.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100357154","display_name":"Hongwei Wang","orcid":"https://orcid.org/0000-0003-3581-8892"},"institutions":[{"id":"https://openalex.org/I129708740","display_name":"Fujian Medical University","ror":"https://ror.org/050s6ns64","country_code":"CN","type":"education","lineage":["https://openalex.org/I129708740"]},{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]},{"id":"https://openalex.org/I168635309","display_name":"University of Calgary","ror":"https://ror.org/03yjb2x39","country_code":"CA","type":"education","lineage":["https://openalex.org/I168635309"]}],"countries":["CA","CN"],"is_corresponding":false,"raw_author_name":"Hongwei Wang","raw_affiliation_strings":["1 College of Bioinformatics Science and Technology, 2 Genomics Research Center, Harbin Medical University, Harbin 150086, China, 3 Department of Microbiology and Infectious Diseases, University of Calgary, Calgary, AB, T2N 4N1, Canada and 4 Bioinformatics Department, Basic Medical College, Fujian Medical University, Fuzhou 350004, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 College of Bioinformatics Science and Technology, 2 Genomics Research Center, Harbin Medical University, Harbin 150086, China, 3 Department of Microbiology and Infectious Diseases, University of Calgary, Calgary, AB, T2N 4N1, Canada and 4 Bioinformatics Department, Basic Medical College, Fujian Medical University, Fuzhou 350004, China","institution_ids":["https://openalex.org/I129708740","https://openalex.org/I156144747","https://openalex.org/I168635309"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101792111","display_name":"Qiang Sun","orcid":"https://orcid.org/0000-0002-6703-1587"},"institutions":[{"id":"https://openalex.org/I129708740","display_name":"Fujian Medical University","ror":"https://ror.org/050s6ns64","country_code":"CN","type":"education","lineage":["https://openalex.org/I129708740"]},{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]},{"id":"https://openalex.org/I168635309","display_name":"University of Calgary","ror":"https://ror.org/03yjb2x39","country_code":"CA","type":"education","lineage":["https://openalex.org/I168635309"]}],"countries":["CA","CN"],"is_corresponding":false,"raw_author_name":"Qiang Sun","raw_affiliation_strings":["1 College of Bioinformatics Science and Technology, 2 Genomics Research Center, Harbin Medical University, Harbin 150086, China, 3 Department of Microbiology and Infectious Diseases, University of Calgary, Calgary, AB, T2N 4N1, Canada and 4 Bioinformatics Department, Basic Medical College, Fujian Medical University, Fuzhou 350004, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 College of Bioinformatics Science and Technology, 2 Genomics Research Center, Harbin Medical University, Harbin 150086, China, 3 Department of Microbiology and Infectious Diseases, University of Calgary, Calgary, AB, T2N 4N1, Canada and 4 Bioinformatics Department, Basic Medical College, Fujian Medical University, Fuzhou 350004, China","institution_ids":["https://openalex.org/I129708740","https://openalex.org/I156144747","https://openalex.org/I168635309"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043417955","display_name":"Wenyuan Zhao","orcid":"https://orcid.org/0000-0002-6477-9434"},"institutions":[{"id":"https://openalex.org/I129708740","display_name":"Fujian Medical University","ror":"https://ror.org/050s6ns64","country_code":"CN","type":"education","lineage":["https://openalex.org/I129708740"]},{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]},{"id":"https://openalex.org/I168635309","display_name":"University of Calgary","ror":"https://ror.org/03yjb2x39","country_code":"CA","type":"education","lineage":["https://openalex.org/I168635309"]}],"countries":["CA","CN"],"is_corresponding":false,"raw_author_name":"Wenyuan Zhao","raw_affiliation_strings":["1 College of Bioinformatics Science and Technology, 2 Genomics Research Center, Harbin Medical University, Harbin 150086, China, 3 Department of Microbiology and Infectious Diseases, University of Calgary, Calgary, AB, T2N 4N1, Canada and 4 Bioinformatics Department, Basic Medical College, Fujian Medical University, Fuzhou 350004, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 College of Bioinformatics Science and Technology, 2 Genomics Research Center, Harbin Medical University, Harbin 150086, China, 3 Department of Microbiology and Infectious Diseases, University of Calgary, Calgary, AB, T2N 4N1, Canada and 4 Bioinformatics Department, Basic Medical College, Fujian Medical University, Fuzhou 350004, China","institution_ids":["https://openalex.org/I129708740","https://openalex.org/I156144747","https://openalex.org/I168635309"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032948942","display_name":"Lishuang Qi","orcid":"https://orcid.org/0000-0002-2991-6544"},"institutions":[{"id":"https://openalex.org/I129708740","display_name":"Fujian Medical University","ror":"https://ror.org/050s6ns64","country_code":"CN","type":"education","lineage":["https://openalex.org/I129708740"]},{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]},{"id":"https://openalex.org/I168635309","display_name":"University of Calgary","ror":"https://ror.org/03yjb2x39","country_code":"CA","type":"education","lineage":["https://openalex.org/I168635309"]}],"countries":["CA","CN"],"is_corresponding":false,"raw_author_name":"Lishuang Qi","raw_affiliation_strings":["1 College of Bioinformatics Science and Technology, 2 Genomics Research Center, Harbin Medical University, Harbin 150086, China, 3 Department of Microbiology and Infectious Diseases, University of Calgary, Calgary, AB, T2N 4N1, Canada and 4 Bioinformatics Department, Basic Medical College, Fujian Medical University, Fuzhou 350004, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 College of Bioinformatics Science and Technology, 2 Genomics Research Center, Harbin Medical University, Harbin 150086, China, 3 Department of Microbiology and Infectious Diseases, University of Calgary, Calgary, AB, T2N 4N1, Canada and 4 Bioinformatics Department, Basic Medical College, Fujian Medical University, Fuzhou 350004, China","institution_ids":["https://openalex.org/I129708740","https://openalex.org/I156144747","https://openalex.org/I168635309"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069723993","display_name":"Yunyan Gu","orcid":"https://orcid.org/0000-0001-5693-4126"},"institutions":[{"id":"https://openalex.org/I129708740","display_name":"Fujian Medical University","ror":"https://ror.org/050s6ns64","country_code":"CN","type":"education","lineage":["https://openalex.org/I129708740"]},{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]},{"id":"https://openalex.org/I168635309","display_name":"University of Calgary","ror":"https://ror.org/03yjb2x39","country_code":"CA","type":"education","lineage":["https://openalex.org/I168635309"]}],"countries":["CA","CN"],"is_corresponding":false,"raw_author_name":"Yunyan Gu","raw_affiliation_strings":["1 College of Bioinformatics Science and Technology, 2 Genomics Research Center, Harbin Medical University, Harbin 150086, China, 3 Department of Microbiology and Infectious Diseases, University of Calgary, Calgary, AB, T2N 4N1, Canada and 4 Bioinformatics Department, Basic Medical College, Fujian Medical University, Fuzhou 350004, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 College of Bioinformatics Science and Technology, 2 Genomics Research Center, Harbin Medical University, Harbin 150086, China, 3 Department of Microbiology and Infectious Diseases, University of Calgary, Calgary, AB, T2N 4N1, Canada and 4 Bioinformatics Department, Basic Medical College, Fujian Medical University, Fuzhou 350004, China","institution_ids":["https://openalex.org/I129708740","https://openalex.org/I156144747","https://openalex.org/I168635309"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100339761","display_name":"Pengfei Li","orcid":"https://orcid.org/0000-0002-5928-1578"},"institutions":[{"id":"https://openalex.org/I129708740","display_name":"Fujian Medical University","ror":"https://ror.org/050s6ns64","country_code":"CN","type":"education","lineage":["https://openalex.org/I129708740"]},{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]},{"id":"https://openalex.org/I168635309","display_name":"University of Calgary","ror":"https://ror.org/03yjb2x39","country_code":"CA","type":"education","lineage":["https://openalex.org/I168635309"]}],"countries":["CA","CN"],"is_corresponding":false,"raw_author_name":"Pengfei Li","raw_affiliation_strings":["1 College of Bioinformatics Science and Technology, 2 Genomics Research Center, Harbin Medical University, Harbin 150086, China, 3 Department of Microbiology and Infectious Diseases, University of Calgary, Calgary, AB, T2N 4N1, Canada and 4 Bioinformatics Department, Basic Medical College, Fujian Medical University, Fuzhou 350004, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 College of Bioinformatics Science and Technology, 2 Genomics Research Center, Harbin Medical University, Harbin 150086, China, 3 Department of Microbiology and Infectious Diseases, University of Calgary, Calgary, AB, T2N 4N1, Canada and 4 Bioinformatics Department, Basic Medical College, Fujian Medical University, Fuzhou 350004, China","institution_ids":["https://openalex.org/I129708740","https://openalex.org/I156144747","https://openalex.org/I168635309"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100442195","display_name":"Mengmeng Zhang","orcid":"https://orcid.org/0000-0003-3207-498X"},"institutions":[{"id":"https://openalex.org/I129708740","display_name":"Fujian Medical University","ror":"https://ror.org/050s6ns64","country_code":"CN","type":"education","lineage":["https://openalex.org/I129708740"]},{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]},{"id":"https://openalex.org/I168635309","display_name":"University of Calgary","ror":"https://ror.org/03yjb2x39","country_code":"CA","type":"education","lineage":["https://openalex.org/I168635309"]}],"countries":["CA","CN"],"is_corresponding":false,"raw_author_name":"Mengmeng Zhang","raw_affiliation_strings":["1 College of Bioinformatics Science and Technology, 2 Genomics Research Center, Harbin Medical University, Harbin 150086, China, 3 Department of Microbiology and Infectious Diseases, University of Calgary, Calgary, AB, T2N 4N1, Canada and 4 Bioinformatics Department, Basic Medical College, Fujian Medical University, Fuzhou 350004, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 College of Bioinformatics Science and Technology, 2 Genomics Research Center, Harbin Medical University, Harbin 150086, China, 3 Department of Microbiology and Infectious Diseases, University of Calgary, Calgary, AB, T2N 4N1, Canada and 4 Bioinformatics Department, Basic Medical College, Fujian Medical University, Fuzhou 350004, China","institution_ids":["https://openalex.org/I129708740","https://openalex.org/I156144747","https://openalex.org/I168635309"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039373859","display_name":"Yang Li","orcid":"https://orcid.org/0000-0002-0677-3245"},"institutions":[{"id":"https://openalex.org/I129708740","display_name":"Fujian Medical University","ror":"https://ror.org/050s6ns64","country_code":"CN","type":"education","lineage":["https://openalex.org/I129708740"]},{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]},{"id":"https://openalex.org/I168635309","display_name":"University of Calgary","ror":"https://ror.org/03yjb2x39","country_code":"CA","type":"education","lineage":["https://openalex.org/I168635309"]}],"countries":["CA","CN"],"is_corresponding":false,"raw_author_name":"Yang Li","raw_affiliation_strings":["1 College of Bioinformatics Science and Technology, 2 Genomics Research Center, Harbin Medical University, Harbin 150086, China, 3 Department of Microbiology and Infectious Diseases, University of Calgary, Calgary, AB, T2N 4N1, Canada and 4 Bioinformatics Department, Basic Medical College, Fujian Medical University, Fuzhou 350004, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 College of Bioinformatics Science and Technology, 2 Genomics Research Center, Harbin Medical University, Harbin 150086, China, 3 Department of Microbiology and Infectious Diseases, University of Calgary, Calgary, AB, T2N 4N1, Canada and 4 Bioinformatics Department, Basic Medical College, Fujian Medical University, Fuzhou 350004, China","institution_ids":["https://openalex.org/I129708740","https://openalex.org/I156144747","https://openalex.org/I168635309"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100687268","display_name":"Shu\u2010Lin Liu","orcid":"https://orcid.org/0000-0002-6883-6037"},"institutions":[{"id":"https://openalex.org/I129708740","display_name":"Fujian Medical University","ror":"https://ror.org/050s6ns64","country_code":"CN","type":"education","lineage":["https://openalex.org/I129708740"]},{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]},{"id":"https://openalex.org/I168635309","display_name":"University of Calgary","ror":"https://ror.org/03yjb2x39","country_code":"CA","type":"education","lineage":["https://openalex.org/I168635309"]}],"countries":["CA","CN"],"is_corresponding":true,"raw_author_name":"Shu-Lin Liu","raw_affiliation_strings":["1 College of Bioinformatics Science and Technology, 2 Genomics Research Center, Harbin Medical University, Harbin 150086, China, 3 Department of Microbiology and Infectious Diseases, University of Calgary, Calgary, AB, T2N 4N1, Canada and 4 Bioinformatics Department, Basic Medical College, Fujian Medical University, Fuzhou 350004, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 College of Bioinformatics Science and Technology, 2 Genomics Research Center, Harbin Medical University, Harbin 150086, China, 3 Department of Microbiology and Infectious Diseases, University of Calgary, Calgary, AB, T2N 4N1, Canada and 4 Bioinformatics Department, Basic Medical College, Fujian Medical University, Fuzhou 350004, China","institution_ids":["https://openalex.org/I129708740","https://openalex.org/I156144747","https://openalex.org/I168635309"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5087055335","display_name":"Zheng Guo","orcid":"https://orcid.org/0000-0003-4466-6026"},"institutions":[{"id":"https://openalex.org/I129708740","display_name":"Fujian Medical University","ror":"https://ror.org/050s6ns64","country_code":"CN","type":"education","lineage":["https://openalex.org/I129708740"]},{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]},{"id":"https://openalex.org/I168635309","display_name":"University of Calgary","ror":"https://ror.org/03yjb2x39","country_code":"CA","type":"education","lineage":["https://openalex.org/I168635309"]}],"countries":["CA","CN"],"is_corresponding":true,"raw_author_name":"Zheng Guo","raw_affiliation_strings":["1 College of Bioinformatics Science and Technology, 2 Genomics Research Center, Harbin Medical University, Harbin 150086, China, 3 Department of Microbiology and Infectious Diseases, University of Calgary, Calgary, AB, T2N 4N1, Canada and 4 Bioinformatics Department, Basic Medical College, Fujian Medical University, Fuzhou 350004, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 College of Bioinformatics Science and Technology, 2 Genomics Research Center, Harbin Medical University, Harbin 150086, China, 3 Department of Microbiology and Infectious Diseases, University of Calgary, Calgary, AB, T2N 4N1, Canada and 4 Bioinformatics Department, Basic Medical College, Fujian Medical University, Fuzhou 350004, China","institution_ids":["https://openalex.org/I129708740","https://openalex.org/I156144747","https://openalex.org/I168635309"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5087055335","https://openalex.org/A5100687268"],"corresponding_institution_ids":["https://openalex.org/I129708740","https://openalex.org/I156144747","https://openalex.org/I168635309"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":4.5491,"has_fulltext":false,"cited_by_count":138,"citation_normalized_percentile":{"value":0.95840377,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":98,"max":100},"biblio":{"volume":"31","issue":"1","first_page":"62","last_page":"68"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.6628000140190125,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.6628000140190125,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.1485999971628189,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.018300000578165054,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/normalization","display_name":"Normalization (sociology)","score":0.7087329626083374},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.5468248724937439},{"id":"https://openalex.org/keywords/personalized-medicine","display_name":"Personalized medicine","score":0.5341424345970154},{"id":"https://openalex.org/keywords/population","display_name":"Population","score":0.5039576888084412},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5006465911865234},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3847489356994629},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.32211604714393616},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.30751317739486694},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.27579283714294434},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.16445645689964294}],"concepts":[{"id":"https://openalex.org/C136886441","wikidata":"https://www.wikidata.org/wiki/Q926129","display_name":"Normalization (sociology)","level":2,"score":0.7087329626083374},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5468248724937439},{"id":"https://openalex.org/C32220436","wikidata":"https://www.wikidata.org/wiki/Q2072214","display_name":"Personalized medicine","level":2,"score":0.5341424345970154},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.5039576888084412},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5006465911865234},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3847489356994629},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.32211604714393616},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.30751317739486694},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.27579283714294434},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.16445645689964294},{"id":"https://openalex.org/C19165224","wikidata":"https://www.wikidata.org/wiki/Q23404","display_name":"Anthropology","level":1,"score":0.0},{"id":"https://openalex.org/C99454951","wikidata":"https://www.wikidata.org/wiki/Q932068","display_name":"Environmental health","level":1,"score":0.0},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D001940","descriptor_name":"Breast","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D001940","descriptor_name":"Breast","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D001940","descriptor_name":"Breast","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000401","qualifier_name":"mortality","is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000401","qualifier_name":"mortality","is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000401","qualifier_name":"mortality","is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008168","descriptor_name":"Lung","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008168","descriptor_name":"Lung","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008168","descriptor_name":"Lung","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008175","descriptor_name":"Lung Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D008175","descriptor_name":"Lung Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D008175","descriptor_name":"Lung Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D008175","descriptor_name":"Lung Neoplasms","qualifier_ui":"Q000401","qualifier_name":"mortality","is_major_topic":false},{"descriptor_ui":"D008175","descriptor_name":"Lung Neoplasms","qualifier_ui":"Q000401","qualifier_name":"mortality","is_major_topic":false},{"descriptor_ui":"D008175","descriptor_name":"Lung Neoplasms","qualifier_ui":"Q000401","qualifier_name":"mortality","is_major_topic":false},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016002","descriptor_name":"Discriminant Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016002","descriptor_name":"Discriminant Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016002","descriptor_name":"Discriminant Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016022","descriptor_name":"Case-Control Studies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016022","descriptor_name":"Case-Control Studies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016022","descriptor_name":"Case-Control Studies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btu522","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btu522","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/31/1/62/49011336/bioinformatics_31_1_62.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:25165092","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25165092","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btu522","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btu522","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/31/1/62/49011336/bioinformatics_31_1_62.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","score":0.5299999713897705,"display_name":"Good health and well-being"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":63,"referenced_works":["https://openalex.org/W1580788756","https://openalex.org/W1967092716","https://openalex.org/W1968968087","https://openalex.org/W1979300931","https://openalex.org/W1980003489","https://openalex.org/W1986172624","https://openalex.org/W1986397115","https://openalex.org/W1992108350","https://openalex.org/W1995471966","https://openalex.org/W2007615926","https://openalex.org/W2018340043","https://openalex.org/W2019267973","https://openalex.org/W2020541351","https://openalex.org/W2020727395","https://openalex.org/W2035421116","https://openalex.org/W2036400107","https://openalex.org/W2041156660","https://openalex.org/W2044545697","https://openalex.org/W2048284906","https://openalex.org/W2067895024","https://openalex.org/W2070418597","https://openalex.org/W2073140442","https://openalex.org/W2075909160","https://openalex.org/W2078216990","https://openalex.org/W2081098333","https://openalex.org/W2096192437","https://openalex.org/W2101039596","https://openalex.org/W2103251375","https://openalex.org/W2107296273","https://openalex.org/W2110065044","https://openalex.org/W2111758831","https://openalex.org/W2111799408","https://openalex.org/W2112023890","https://openalex.org/W2113258769","https://openalex.org/W2118423420","https://openalex.org/W2120108543","https://openalex.org/W2121158863","https://openalex.org/W2126008912","https://openalex.org/W2129925362","https://openalex.org/W2130410032","https://openalex.org/W2133410935","https://openalex.org/W2134345937","https://openalex.org/W2138778951","https://openalex.org/W2146843058","https://openalex.org/W2147013674","https://openalex.org/W2147442577","https://openalex.org/W2155354546","https://openalex.org/W2157795344","https://openalex.org/W2158017189","https://openalex.org/W2167736999","https://openalex.org/W2170989872","https://openalex.org/W2171528238","https://openalex.org/W2325343629","https://openalex.org/W2414372196","https://openalex.org/W2797177778","https://openalex.org/W3015973740","https://openalex.org/W3147894994","https://openalex.org/W4206316875","https://openalex.org/W4252684946","https://openalex.org/W4285719527","https://openalex.org/W4293241248","https://openalex.org/W4294107304","https://openalex.org/W6668869196"],"related_works":["https://openalex.org/W2591697403","https://openalex.org/W2944728705","https://openalex.org/W2904022177","https://openalex.org/W2359348847","https://openalex.org/W3011538607","https://openalex.org/W4294432981","https://openalex.org/W4321441197","https://openalex.org/W2953716828","https://openalex.org/W2469820710","https://openalex.org/W4321276295"],"abstract_inverted_index":{"MOTIVATION:":[0],"The":[1,101,136],"differential":[2,27,44],"expression":[3,28,45],"analysis":[4,46],"focusing":[5],"on":[6,122],"inter-group":[7],"comparison":[8],"can":[9,132],"capture":[10],"only":[11],"differentially":[12],"expressed":[13],"genes":[14,59,125],"(DE":[15],"genes)":[16],"at":[17,47],"the":[18,24,48,66,139,148],"population":[19],"level,":[20],"which":[21,123],"may":[22],"mask":[23],"heterogeneity":[25],"of":[26,103,111,138,152],"in":[29,60,69,107,142,164],"individuals.":[30],"Thus,":[31],"to":[32,42,56,91,94],"provide":[33],"patient-specific":[34],"information":[35],"for":[36,128,155],"personalized":[37],"medicine,":[38],"it":[39],"is":[40,162,168],"necessary":[41],"conduct":[43],"individual":[49,61,70],"level.":[50],"RESULTS:":[51],"We":[52],"proposed":[53],"a":[54,108],"method":[55,84,141],"detect":[57],"DE":[58],"disease":[62,71,130],"samples":[63],"by":[64,147],"using":[65,117],"disrupted":[67],"ordering":[68],"samples.":[72],"In":[73],"both":[74],"simulated":[75],"data":[76,99],"and":[77,98,126,150],"real":[78],"paired":[79],"cancer-normal":[80],"sample":[81,131],"data,":[82,120],"this":[83],"showed":[85],"excellent":[86],"performance.":[87],"It":[88],"was":[89,145],"found":[90],"be":[92,115,133],"insensitive":[93],"experimental":[95],"batch":[96],"effects":[97],"normalization.":[100],"landscape":[102],"stable":[104],"gene":[105],"pairs":[106],"particular":[109],"type":[110],"normal":[112],"tissue":[113],"could":[114],"predetermined":[116],"previously":[118],"accumulated":[119],"based":[121],"dysregulated":[124],"pathways":[127],"any":[129],"readily":[134],"detected.":[135],"usefulness":[137],"RankComp":[140,161],"clinical":[143],"settings":[144],"exemplified":[146],"identification":[149],"application":[151],"prognostic":[153],"markers":[154],"lung":[156],"cancer.":[157],"AVAILABILITY":[158],"AND":[159],"IMPLEMENTATION:":[160],"implemented":[163],"R":[165],"script":[166],"that":[167],"freely":[169],"available":[170],"from":[171],"Supplementary":[172],"Materials.":[173]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":7},{"year":2024,"cited_by_count":17},{"year":2023,"cited_by_count":9},{"year":2022,"cited_by_count":11},{"year":2021,"cited_by_count":20},{"year":2020,"cited_by_count":14},{"year":2019,"cited_by_count":15},{"year":2018,"cited_by_count":7},{"year":2017,"cited_by_count":17},{"year":2016,"cited_by_count":12},{"year":2015,"cited_by_count":6}],"updated_date":"2026-07-22T07:51:19.307946","created_date":"2025-10-10T00:00:00"}
