{"id":"https://openalex.org/W2118772666","doi":"https://doi.org/10.1093/bioinformatics/btu271","title":"Automated detection and tracking of many cells by using 4D live-cell imaging data","display_name":"Automated detection and tracking of many cells by using 4D live-cell imaging data","publication_year":2014,"publication_date":"2014-06-11","ids":{"openalex":"https://openalex.org/W2118772666","doi":"https://doi.org/10.1093/bioinformatics/btu271","mag":"2118772666","pmid":"https://pubmed.ncbi.nlm.nih.gov/24932004"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btu271","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btu271","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/30/12/i43/48927350/bioinformatics_30_12_i43.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/30/12/i43/48927350/bioinformatics_30_12_i43.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5028359272","display_name":"T Tokunaga","orcid":"https://orcid.org/0000-0003-1091-2022"},"institutions":[{"id":"https://openalex.org/I10091056","display_name":"Kanazawa University","ror":"https://ror.org/02hwp6a56","country_code":"JP","type":"education","lineage":["https://openalex.org/I10091056"]},{"id":"https://openalex.org/I135598925","display_name":"Kyushu University","ror":"https://ror.org/00p4k0j84","country_code":"JP","type":"education","lineage":["https://openalex.org/I135598925"]},{"id":"https://openalex.org/I4210134673","display_name":"The Institute of Statistical Mathematics","ror":"https://ror.org/03jcejr58","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1319490839","https://openalex.org/I4210134673","https://openalex.org/I4210158934"]},{"id":"https://openalex.org/I4210158934","display_name":"Research Organization of Information and Systems","ror":"https://ror.org/04p4e8t29","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1319490839","https://openalex.org/I4210158934"]},{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Terumasa Tokunaga","raw_affiliation_strings":["1 The Institute of Statistical Mathematics, Research Organization of Information and Systems, 10-3 Midori-cho, Tachikawa, Tokyo 190-8562, 2CREST, JST, 3Kanazawa University, Kakuma, Kanazawa 920-1192, 4The University of Tokyo, Building 3, 2-11-16 Yayoi, Bunkyo-ku, Tokyo 113-0032 5Kyushu University, 6-10-1 Hakozaki, Higashi-ku, Fukuoka 812-8581, 6The Graduate University for Advanced Studies, 10-3 Midori-cho, Tachikawa, Tokyo 190-8562 and 7JST, ERATO, 2-2-2 Hikaridai Seika-cho, Soraku-gun, Kyoto-fu, JAPAN"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 The Institute of Statistical Mathematics, Research Organization of Information and Systems, 10-3 Midori-cho, Tachikawa, Tokyo 190-8562, 2CREST, JST, 3Kanazawa University, Kakuma, Kanazawa 920-1192, 4The University of Tokyo, Building 3, 2-11-16 Yayoi, Bunkyo-ku, Tokyo 113-0032 5Kyushu University, 6-10-1 Hakozaki, Higashi-ku, Fukuoka 812-8581, 6The Graduate University for Advanced Studies, 10-3 Midori-cho, Tachikawa, Tokyo 190-8562 and 7JST, ERATO, 2-2-2 Hikaridai Seika-cho, Soraku-gun, Kyoto-fu, JAPAN","institution_ids":["https://openalex.org/I4210134673","https://openalex.org/I10091056","https://openalex.org/I74801974","https://openalex.org/I135598925","https://openalex.org/I4210158934"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072391173","display_name":"Osamu Hirose","orcid":"https://orcid.org/0000-0002-8077-8589"},"institutions":[{"id":"https://openalex.org/I10091056","display_name":"Kanazawa University","ror":"https://ror.org/02hwp6a56","country_code":"JP","type":"education","lineage":["https://openalex.org/I10091056"]},{"id":"https://openalex.org/I135598925","display_name":"Kyushu University","ror":"https://ror.org/00p4k0j84","country_code":"JP","type":"education","lineage":["https://openalex.org/I135598925"]},{"id":"https://openalex.org/I4210134673","display_name":"The Institute of Statistical Mathematics","ror":"https://ror.org/03jcejr58","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1319490839","https://openalex.org/I4210134673","https://openalex.org/I4210158934"]},{"id":"https://openalex.org/I4210158934","display_name":"Research Organization of Information and Systems","ror":"https://ror.org/04p4e8t29","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1319490839","https://openalex.org/I4210158934"]},{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Osamu Hirose","raw_affiliation_strings":["1 The Institute of Statistical Mathematics, Research Organization of Information and Systems, 10-3 Midori-cho, Tachikawa, Tokyo 190-8562, 2CREST, JST, 3Kanazawa University, Kakuma, Kanazawa 920-1192, 4The University of Tokyo, Building 3, 2-11-16 Yayoi, Bunkyo-ku, Tokyo 113-0032 5Kyushu University, 6-10-1 Hakozaki, Higashi-ku, Fukuoka 812-8581, 6The Graduate University for Advanced Studies, 10-3 Midori-cho, Tachikawa, Tokyo 190-8562 and 7JST, ERATO, 2-2-2 Hikaridai Seika-cho, Soraku-gun, Kyoto-fu, JAPAN"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 The Institute of Statistical Mathematics, Research Organization of Information and Systems, 10-3 Midori-cho, Tachikawa, Tokyo 190-8562, 2CREST, JST, 3Kanazawa University, Kakuma, Kanazawa 920-1192, 4The University of Tokyo, Building 3, 2-11-16 Yayoi, Bunkyo-ku, Tokyo 113-0032 5Kyushu University, 6-10-1 Hakozaki, Higashi-ku, Fukuoka 812-8581, 6The Graduate University for Advanced Studies, 10-3 Midori-cho, Tachikawa, Tokyo 190-8562 and 7JST, ERATO, 2-2-2 Hikaridai Seika-cho, Soraku-gun, Kyoto-fu, JAPAN","institution_ids":["https://openalex.org/I4210134673","https://openalex.org/I10091056","https://openalex.org/I74801974","https://openalex.org/I135598925","https://openalex.org/I4210158934"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045003142","display_name":"Shotaro Kawaguchi","orcid":null},"institutions":[{"id":"https://openalex.org/I10091056","display_name":"Kanazawa University","ror":"https://ror.org/02hwp6a56","country_code":"JP","type":"education","lineage":["https://openalex.org/I10091056"]},{"id":"https://openalex.org/I135598925","display_name":"Kyushu University","ror":"https://ror.org/00p4k0j84","country_code":"JP","type":"education","lineage":["https://openalex.org/I135598925"]},{"id":"https://openalex.org/I4210134673","display_name":"The Institute of Statistical Mathematics","ror":"https://ror.org/03jcejr58","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1319490839","https://openalex.org/I4210134673","https://openalex.org/I4210158934"]},{"id":"https://openalex.org/I4210158934","display_name":"Research Organization of Information and Systems","ror":"https://ror.org/04p4e8t29","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1319490839","https://openalex.org/I4210158934"]},{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Shotaro Kawaguchi","raw_affiliation_strings":["1 The Institute of Statistical Mathematics, Research Organization of Information and Systems, 10-3 Midori-cho, Tachikawa, Tokyo 190-8562, 2CREST, JST, 3Kanazawa University, Kakuma, Kanazawa 920-1192, 4The University of Tokyo, Building 3, 2-11-16 Yayoi, Bunkyo-ku, Tokyo 113-0032 5Kyushu University, 6-10-1 Hakozaki, Higashi-ku, Fukuoka 812-8581, 6The Graduate University for Advanced Studies, 10-3 Midori-cho, Tachikawa, Tokyo 190-8562 and 7JST, ERATO, 2-2-2 Hikaridai Seika-cho, Soraku-gun, Kyoto-fu, JAPAN"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 The Institute of Statistical Mathematics, Research Organization of Information and Systems, 10-3 Midori-cho, Tachikawa, Tokyo 190-8562, 2CREST, JST, 3Kanazawa University, Kakuma, Kanazawa 920-1192, 4The University of Tokyo, Building 3, 2-11-16 Yayoi, Bunkyo-ku, Tokyo 113-0032 5Kyushu University, 6-10-1 Hakozaki, Higashi-ku, Fukuoka 812-8581, 6The Graduate University for Advanced Studies, 10-3 Midori-cho, Tachikawa, Tokyo 190-8562 and 7JST, ERATO, 2-2-2 Hikaridai Seika-cho, Soraku-gun, Kyoto-fu, JAPAN","institution_ids":["https://openalex.org/I4210134673","https://openalex.org/I10091056","https://openalex.org/I74801974","https://openalex.org/I135598925","https://openalex.org/I4210158934"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045488230","display_name":"Yu Toyoshima","orcid":"https://orcid.org/0000-0001-5239-2235"},"institutions":[{"id":"https://openalex.org/I10091056","display_name":"Kanazawa University","ror":"https://ror.org/02hwp6a56","country_code":"JP","type":"education","lineage":["https://openalex.org/I10091056"]},{"id":"https://openalex.org/I135598925","display_name":"Kyushu University","ror":"https://ror.org/00p4k0j84","country_code":"JP","type":"education","lineage":["https://openalex.org/I135598925"]},{"id":"https://openalex.org/I4210134673","display_name":"The Institute of Statistical Mathematics","ror":"https://ror.org/03jcejr58","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1319490839","https://openalex.org/I4210134673","https://openalex.org/I4210158934"]},{"id":"https://openalex.org/I4210158934","display_name":"Research Organization of Information and Systems","ror":"https://ror.org/04p4e8t29","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1319490839","https://openalex.org/I4210158934"]},{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Yu Toyoshima","raw_affiliation_strings":["1 The Institute of Statistical Mathematics, Research Organization of Information and Systems, 10-3 Midori-cho, Tachikawa, Tokyo 190-8562, 2CREST, JST, 3Kanazawa University, Kakuma, Kanazawa 920-1192, 4The University of Tokyo, Building 3, 2-11-16 Yayoi, Bunkyo-ku, Tokyo 113-0032 5Kyushu University, 6-10-1 Hakozaki, Higashi-ku, Fukuoka 812-8581, 6The Graduate University for Advanced Studies, 10-3 Midori-cho, Tachikawa, Tokyo 190-8562 and 7JST, ERATO, 2-2-2 Hikaridai Seika-cho, Soraku-gun, Kyoto-fu, JAPAN"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 The Institute of Statistical Mathematics, Research Organization of Information and Systems, 10-3 Midori-cho, Tachikawa, Tokyo 190-8562, 2CREST, JST, 3Kanazawa University, Kakuma, Kanazawa 920-1192, 4The University of Tokyo, Building 3, 2-11-16 Yayoi, Bunkyo-ku, Tokyo 113-0032 5Kyushu University, 6-10-1 Hakozaki, Higashi-ku, Fukuoka 812-8581, 6The Graduate University for Advanced Studies, 10-3 Midori-cho, Tachikawa, Tokyo 190-8562 and 7JST, ERATO, 2-2-2 Hikaridai Seika-cho, Soraku-gun, Kyoto-fu, JAPAN","institution_ids":["https://openalex.org/I4210134673","https://openalex.org/I10091056","https://openalex.org/I74801974","https://openalex.org/I135598925","https://openalex.org/I4210158934"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048830659","display_name":"Takayuki Teramoto","orcid":"https://orcid.org/0000-0001-7060-7148"},"institutions":[{"id":"https://openalex.org/I10091056","display_name":"Kanazawa University","ror":"https://ror.org/02hwp6a56","country_code":"JP","type":"education","lineage":["https://openalex.org/I10091056"]},{"id":"https://openalex.org/I135598925","display_name":"Kyushu University","ror":"https://ror.org/00p4k0j84","country_code":"JP","type":"education","lineage":["https://openalex.org/I135598925"]},{"id":"https://openalex.org/I4210134673","display_name":"The Institute of Statistical Mathematics","ror":"https://ror.org/03jcejr58","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1319490839","https://openalex.org/I4210134673","https://openalex.org/I4210158934"]},{"id":"https://openalex.org/I4210158934","display_name":"Research Organization of Information and Systems","ror":"https://ror.org/04p4e8t29","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1319490839","https://openalex.org/I4210158934"]},{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Takayuki Teramoto","raw_affiliation_strings":["1 The Institute of Statistical Mathematics, Research Organization of Information and Systems, 10-3 Midori-cho, Tachikawa, Tokyo 190-8562, 2CREST, JST, 3Kanazawa University, Kakuma, Kanazawa 920-1192, 4The University of Tokyo, Building 3, 2-11-16 Yayoi, Bunkyo-ku, Tokyo 113-0032 5Kyushu University, 6-10-1 Hakozaki, Higashi-ku, Fukuoka 812-8581, 6The Graduate University for Advanced Studies, 10-3 Midori-cho, Tachikawa, Tokyo 190-8562 and 7JST, ERATO, 2-2-2 Hikaridai Seika-cho, Soraku-gun, Kyoto-fu, JAPAN"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 The Institute of Statistical Mathematics, Research Organization of Information and Systems, 10-3 Midori-cho, Tachikawa, Tokyo 190-8562, 2CREST, JST, 3Kanazawa University, Kakuma, Kanazawa 920-1192, 4The University of Tokyo, Building 3, 2-11-16 Yayoi, Bunkyo-ku, Tokyo 113-0032 5Kyushu University, 6-10-1 Hakozaki, Higashi-ku, Fukuoka 812-8581, 6The Graduate University for Advanced Studies, 10-3 Midori-cho, Tachikawa, Tokyo 190-8562 and 7JST, ERATO, 2-2-2 Hikaridai Seika-cho, Soraku-gun, Kyoto-fu, JAPAN","institution_ids":["https://openalex.org/I4210134673","https://openalex.org/I10091056","https://openalex.org/I74801974","https://openalex.org/I135598925","https://openalex.org/I4210158934"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027072574","display_name":"Hisaki Ikebata","orcid":null},"institutions":[{"id":"https://openalex.org/I10091056","display_name":"Kanazawa University","ror":"https://ror.org/02hwp6a56","country_code":"JP","type":"education","lineage":["https://openalex.org/I10091056"]},{"id":"https://openalex.org/I135598925","display_name":"Kyushu University","ror":"https://ror.org/00p4k0j84","country_code":"JP","type":"education","lineage":["https://openalex.org/I135598925"]},{"id":"https://openalex.org/I4210134673","display_name":"The Institute of Statistical Mathematics","ror":"https://ror.org/03jcejr58","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1319490839","https://openalex.org/I4210134673","https://openalex.org/I4210158934"]},{"id":"https://openalex.org/I4210158934","display_name":"Research Organization of Information and Systems","ror":"https://ror.org/04p4e8t29","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1319490839","https://openalex.org/I4210158934"]},{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Hisaki Ikebata","raw_affiliation_strings":["1 The Institute of Statistical Mathematics, Research Organization of Information and Systems, 10-3 Midori-cho, Tachikawa, Tokyo 190-8562, 2CREST, JST, 3Kanazawa University, Kakuma, Kanazawa 920-1192, 4The University of Tokyo, Building 3, 2-11-16 Yayoi, Bunkyo-ku, Tokyo 113-0032 5Kyushu University, 6-10-1 Hakozaki, Higashi-ku, Fukuoka 812-8581, 6The Graduate University for Advanced Studies, 10-3 Midori-cho, Tachikawa, Tokyo 190-8562 and 7JST, ERATO, 2-2-2 Hikaridai Seika-cho, Soraku-gun, Kyoto-fu, JAPAN"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 The Institute of Statistical Mathematics, Research Organization of Information and Systems, 10-3 Midori-cho, Tachikawa, Tokyo 190-8562, 2CREST, JST, 3Kanazawa University, Kakuma, Kanazawa 920-1192, 4The University of Tokyo, Building 3, 2-11-16 Yayoi, Bunkyo-ku, Tokyo 113-0032 5Kyushu University, 6-10-1 Hakozaki, Higashi-ku, Fukuoka 812-8581, 6The Graduate University for Advanced Studies, 10-3 Midori-cho, Tachikawa, Tokyo 190-8562 and 7JST, ERATO, 2-2-2 Hikaridai Seika-cho, Soraku-gun, Kyoto-fu, JAPAN","institution_ids":["https://openalex.org/I4210134673","https://openalex.org/I10091056","https://openalex.org/I74801974","https://openalex.org/I135598925","https://openalex.org/I4210158934"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021932226","display_name":"Sayuri Kuge","orcid":null},"institutions":[{"id":"https://openalex.org/I10091056","display_name":"Kanazawa University","ror":"https://ror.org/02hwp6a56","country_code":"JP","type":"education","lineage":["https://openalex.org/I10091056"]},{"id":"https://openalex.org/I135598925","display_name":"Kyushu University","ror":"https://ror.org/00p4k0j84","country_code":"JP","type":"education","lineage":["https://openalex.org/I135598925"]},{"id":"https://openalex.org/I4210134673","display_name":"The Institute of Statistical Mathematics","ror":"https://ror.org/03jcejr58","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1319490839","https://openalex.org/I4210134673","https://openalex.org/I4210158934"]},{"id":"https://openalex.org/I4210158934","display_name":"Research Organization of Information and Systems","ror":"https://ror.org/04p4e8t29","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1319490839","https://openalex.org/I4210158934"]},{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Sayuri Kuge","raw_affiliation_strings":["1 The Institute of Statistical Mathematics, Research Organization of Information and Systems, 10-3 Midori-cho, Tachikawa, Tokyo 190-8562, 2CREST, JST, 3Kanazawa University, Kakuma, Kanazawa 920-1192, 4The University of Tokyo, Building 3, 2-11-16 Yayoi, Bunkyo-ku, Tokyo 113-0032 5Kyushu University, 6-10-1 Hakozaki, Higashi-ku, Fukuoka 812-8581, 6The Graduate University for Advanced Studies, 10-3 Midori-cho, Tachikawa, Tokyo 190-8562 and 7JST, ERATO, 2-2-2 Hikaridai Seika-cho, Soraku-gun, Kyoto-fu, JAPAN"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 The Institute of Statistical Mathematics, Research Organization of Information and Systems, 10-3 Midori-cho, Tachikawa, Tokyo 190-8562, 2CREST, JST, 3Kanazawa University, Kakuma, Kanazawa 920-1192, 4The University of Tokyo, Building 3, 2-11-16 Yayoi, Bunkyo-ku, Tokyo 113-0032 5Kyushu University, 6-10-1 Hakozaki, Higashi-ku, Fukuoka 812-8581, 6The Graduate University for Advanced Studies, 10-3 Midori-cho, Tachikawa, Tokyo 190-8562 and 7JST, ERATO, 2-2-2 Hikaridai Seika-cho, Soraku-gun, Kyoto-fu, JAPAN","institution_ids":["https://openalex.org/I4210134673","https://openalex.org/I10091056","https://openalex.org/I74801974","https://openalex.org/I135598925","https://openalex.org/I4210158934"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101871109","display_name":"Takeshi Ishihara","orcid":"https://orcid.org/0000-0001-9175-3072"},"institutions":[{"id":"https://openalex.org/I10091056","display_name":"Kanazawa University","ror":"https://ror.org/02hwp6a56","country_code":"JP","type":"education","lineage":["https://openalex.org/I10091056"]},{"id":"https://openalex.org/I135598925","display_name":"Kyushu University","ror":"https://ror.org/00p4k0j84","country_code":"JP","type":"education","lineage":["https://openalex.org/I135598925"]},{"id":"https://openalex.org/I4210134673","display_name":"The Institute of Statistical Mathematics","ror":"https://ror.org/03jcejr58","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1319490839","https://openalex.org/I4210134673","https://openalex.org/I4210158934"]},{"id":"https://openalex.org/I4210158934","display_name":"Research Organization of Information and Systems","ror":"https://ror.org/04p4e8t29","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1319490839","https://openalex.org/I4210158934"]},{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Takeshi Ishihara","raw_affiliation_strings":["1 The Institute of Statistical Mathematics, Research Organization of Information and Systems, 10-3 Midori-cho, Tachikawa, Tokyo 190-8562, 2CREST, JST, 3Kanazawa University, Kakuma, Kanazawa 920-1192, 4The University of Tokyo, Building 3, 2-11-16 Yayoi, Bunkyo-ku, Tokyo 113-0032 5Kyushu University, 6-10-1 Hakozaki, Higashi-ku, Fukuoka 812-8581, 6The Graduate University for Advanced Studies, 10-3 Midori-cho, Tachikawa, Tokyo 190-8562 and 7JST, ERATO, 2-2-2 Hikaridai Seika-cho, Soraku-gun, Kyoto-fu, JAPAN"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 The Institute of Statistical Mathematics, Research Organization of Information and Systems, 10-3 Midori-cho, Tachikawa, Tokyo 190-8562, 2CREST, JST, 3Kanazawa University, Kakuma, Kanazawa 920-1192, 4The University of Tokyo, Building 3, 2-11-16 Yayoi, Bunkyo-ku, Tokyo 113-0032 5Kyushu University, 6-10-1 Hakozaki, Higashi-ku, Fukuoka 812-8581, 6The Graduate University for Advanced Studies, 10-3 Midori-cho, Tachikawa, Tokyo 190-8562 and 7JST, ERATO, 2-2-2 Hikaridai Seika-cho, Soraku-gun, Kyoto-fu, JAPAN","institution_ids":["https://openalex.org/I4210134673","https://openalex.org/I10091056","https://openalex.org/I74801974","https://openalex.org/I135598925","https://openalex.org/I4210158934"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025060410","display_name":"Yuichi Iino","orcid":"https://orcid.org/0000-0002-0936-2660"},"institutions":[{"id":"https://openalex.org/I10091056","display_name":"Kanazawa University","ror":"https://ror.org/02hwp6a56","country_code":"JP","type":"education","lineage":["https://openalex.org/I10091056"]},{"id":"https://openalex.org/I135598925","display_name":"Kyushu University","ror":"https://ror.org/00p4k0j84","country_code":"JP","type":"education","lineage":["https://openalex.org/I135598925"]},{"id":"https://openalex.org/I4210134673","display_name":"The Institute of Statistical Mathematics","ror":"https://ror.org/03jcejr58","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1319490839","https://openalex.org/I4210134673","https://openalex.org/I4210158934"]},{"id":"https://openalex.org/I4210158934","display_name":"Research Organization of Information and Systems","ror":"https://ror.org/04p4e8t29","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1319490839","https://openalex.org/I4210158934"]},{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Yuichi Iino","raw_affiliation_strings":["1 The Institute of Statistical Mathematics, Research Organization of Information and Systems, 10-3 Midori-cho, Tachikawa, Tokyo 190-8562, 2CREST, JST, 3Kanazawa University, Kakuma, Kanazawa 920-1192, 4The University of Tokyo, Building 3, 2-11-16 Yayoi, Bunkyo-ku, Tokyo 113-0032 5Kyushu University, 6-10-1 Hakozaki, Higashi-ku, Fukuoka 812-8581, 6The Graduate University for Advanced Studies, 10-3 Midori-cho, Tachikawa, Tokyo 190-8562 and 7JST, ERATO, 2-2-2 Hikaridai Seika-cho, Soraku-gun, Kyoto-fu, JAPAN"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 The Institute of Statistical Mathematics, Research Organization of Information and Systems, 10-3 Midori-cho, Tachikawa, Tokyo 190-8562, 2CREST, JST, 3Kanazawa University, Kakuma, Kanazawa 920-1192, 4The University of Tokyo, Building 3, 2-11-16 Yayoi, Bunkyo-ku, Tokyo 113-0032 5Kyushu University, 6-10-1 Hakozaki, Higashi-ku, Fukuoka 812-8581, 6The Graduate University for Advanced Studies, 10-3 Midori-cho, Tachikawa, Tokyo 190-8562 and 7JST, ERATO, 2-2-2 Hikaridai Seika-cho, Soraku-gun, Kyoto-fu, JAPAN","institution_ids":["https://openalex.org/I4210134673","https://openalex.org/I10091056","https://openalex.org/I74801974","https://openalex.org/I135598925","https://openalex.org/I4210158934"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5031629643","display_name":"Ryo Yoshida","orcid":"https://orcid.org/0000-0001-8092-0162"},"institutions":[{"id":"https://openalex.org/I10091056","display_name":"Kanazawa University","ror":"https://ror.org/02hwp6a56","country_code":"JP","type":"education","lineage":["https://openalex.org/I10091056"]},{"id":"https://openalex.org/I135598925","display_name":"Kyushu University","ror":"https://ror.org/00p4k0j84","country_code":"JP","type":"education","lineage":["https://openalex.org/I135598925"]},{"id":"https://openalex.org/I4210134673","display_name":"The Institute of Statistical Mathematics","ror":"https://ror.org/03jcejr58","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1319490839","https://openalex.org/I4210134673","https://openalex.org/I4210158934"]},{"id":"https://openalex.org/I4210158934","display_name":"Research Organization of Information and Systems","ror":"https://ror.org/04p4e8t29","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1319490839","https://openalex.org/I4210158934"]},{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":true,"raw_author_name":"Ryo Yoshida","raw_affiliation_strings":["1 The Institute of Statistical Mathematics, Research Organization of Information and Systems, 10-3 Midori-cho, Tachikawa, Tokyo 190-8562, 2CREST, JST, 3Kanazawa University, Kakuma, Kanazawa 920-1192, 4The University of Tokyo, Building 3, 2-11-16 Yayoi, Bunkyo-ku, Tokyo 113-0032 5Kyushu University, 6-10-1 Hakozaki, Higashi-ku, Fukuoka 812-8581, 6The Graduate University for Advanced Studies, 10-3 Midori-cho, Tachikawa, Tokyo 190-8562 and 7JST, ERATO, 2-2-2 Hikaridai Seika-cho, Soraku-gun, Kyoto-fu, JAPAN"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 The Institute of Statistical Mathematics, Research Organization of Information and Systems, 10-3 Midori-cho, Tachikawa, Tokyo 190-8562, 2CREST, JST, 3Kanazawa University, Kakuma, Kanazawa 920-1192, 4The University of Tokyo, Building 3, 2-11-16 Yayoi, Bunkyo-ku, Tokyo 113-0032 5Kyushu University, 6-10-1 Hakozaki, Higashi-ku, Fukuoka 812-8581, 6The Graduate University for Advanced Studies, 10-3 Midori-cho, Tachikawa, Tokyo 190-8562 and 7JST, ERATO, 2-2-2 Hikaridai Seika-cho, Soraku-gun, Kyoto-fu, JAPAN","institution_ids":["https://openalex.org/I4210134673","https://openalex.org/I10091056","https://openalex.org/I74801974","https://openalex.org/I135598925","https://openalex.org/I4210158934"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":10,"corresponding_author_ids":["https://openalex.org/A5031629643"],"corresponding_institution_ids":["https://openalex.org/I10091056","https://openalex.org/I135598925","https://openalex.org/I4210134673","https://openalex.org/I4210158934","https://openalex.org/I74801974"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":4.9696,"has_fulltext":true,"cited_by_count":50,"citation_normalized_percentile":{"value":0.94661218,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":100},"biblio":{"volume":"30","issue":"12","first_page":"i43","last_page":"i51"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.635699987411499,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.635699987411499,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10676","display_name":"Genetics, Aging, and Longevity in Model Organisms","score":0.12520000338554382,"subfield":{"id":"https://openalex.org/subfields/1302","display_name":"Aging"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10540","display_name":"Advanced Fluorescence Microscopy Techniques","score":0.07010000199079514,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.751245379447937},{"id":"https://openalex.org/keywords/tracking","display_name":"Tracking (education)","score":0.7415056228637695},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.7379329800605774},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7215192317962646},{"id":"https://openalex.org/keywords/bittorrent-tracker","display_name":"BitTorrent tracker","score":0.6341457962989807},{"id":"https://openalex.org/keywords/markov-random-field","display_name":"Markov random field","score":0.5427714586257935},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.478769451379776},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.3861802816390991},{"id":"https://openalex.org/keywords/eye-tracking","display_name":"Eye tracking","score":0.30812376737594604},{"id":"https://openalex.org/keywords/image-segmentation","display_name":"Image segmentation","score":0.20411592721939087}],"concepts":[{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.751245379447937},{"id":"https://openalex.org/C2775936607","wikidata":"https://www.wikidata.org/wiki/Q466845","display_name":"Tracking (education)","level":2,"score":0.7415056228637695},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.7379329800605774},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7215192317962646},{"id":"https://openalex.org/C57501372","wikidata":"https://www.wikidata.org/wiki/Q2021268","display_name":"BitTorrent tracker","level":3,"score":0.6341457962989807},{"id":"https://openalex.org/C2778045648","wikidata":"https://www.wikidata.org/wiki/Q176827","display_name":"Markov random field","level":4,"score":0.5427714586257935},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.478769451379776},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3861802816390991},{"id":"https://openalex.org/C56461940","wikidata":"https://www.wikidata.org/wiki/Q970687","display_name":"Eye tracking","level":2,"score":0.30812376737594604},{"id":"https://openalex.org/C124504099","wikidata":"https://www.wikidata.org/wiki/Q56933","display_name":"Image segmentation","level":3,"score":0.20411592721939087},{"id":"https://openalex.org/C19417346","wikidata":"https://www.wikidata.org/wiki/Q7922","display_name":"Pedagogy","level":1,"score":0.0},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008856","descriptor_name":"Microscopy, Fluorescence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008856","descriptor_name":"Microscopy, Fluorescence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008856","descriptor_name":"Microscopy, Fluorescence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009474","descriptor_name":"Neurons","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":false},{"descriptor_ui":"D009474","descriptor_name":"Neurons","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":false},{"descriptor_ui":"D009474","descriptor_name":"Neurons","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":false},{"descriptor_ui":"D017173","descriptor_name":"Caenorhabditis elegans","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":false},{"descriptor_ui":"D017173","descriptor_name":"Caenorhabditis elegans","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":false},{"descriptor_ui":"D017173","descriptor_name":"Caenorhabditis elegans","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":false},{"descriptor_ui":"D018613","descriptor_name":"Microscopy, Confocal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018613","descriptor_name":"Microscopy, Confocal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018613","descriptor_name":"Microscopy, Confocal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D021621","descriptor_name":"Imaging, Three-Dimensional","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D021621","descriptor_name":"Imaging, Three-Dimensional","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D021621","descriptor_name":"Imaging, Three-Dimensional","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D058948","descriptor_name":"Cell Tracking","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D058948","descriptor_name":"Cell Tracking","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D058948","descriptor_name":"Cell Tracking","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059008","descriptor_name":"Time-Lapse Imaging","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059008","descriptor_name":"Time-Lapse Imaging","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059008","descriptor_name":"Time-Lapse Imaging","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btu271","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btu271","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/30/12/i43/48927350/bioinformatics_30_12_i43.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:24932004","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24932004","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:4058942","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4058942","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btu271","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btu271","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/30/12/i43/48927350/bioinformatics_30_12_i43.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2521286739","display_name":null,"funder_award_id":"CREST","funder_id":"https://openalex.org/F4320334789","funder_display_name":"Japan Science and Technology Agency"}],"funders":[{"id":"https://openalex.org/F4320334789","display_name":"Japan Science and Technology Agency","ror":"https://ror.org/00097mb19"},{"id":"https://openalex.org/F4320338075","display_name":"Core Research for Evolutional Science and Technology","ror":"https://ror.org/00097mb19"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2118772666.pdf","grobid_xml":"https://content.openalex.org/works/W2118772666.grobid-xml"},"referenced_works_count":36,"referenced_works":["https://openalex.org/W149540474","https://openalex.org/W204885769","https://openalex.org/W1499578337","https://openalex.org/W1638498331","https://openalex.org/W1971955404","https://openalex.org/W2001895000","https://openalex.org/W2017927472","https://openalex.org/W2037621308","https://openalex.org/W2046385387","https://openalex.org/W2054821087","https://openalex.org/W2101916976","https://openalex.org/W2105916176","https://openalex.org/W2107422873","https://openalex.org/W2115734610","https://openalex.org/W2124260943","https://openalex.org/W2126290670","https://openalex.org/W2129819572","https://openalex.org/W2129905273","https://openalex.org/W2131006320","https://openalex.org/W2132355119","https://openalex.org/W2133003941","https://openalex.org/W2133059825","https://openalex.org/W2137345842","https://openalex.org/W2145860405","https://openalex.org/W2150330984","https://openalex.org/W2154917588","https://openalex.org/W2160337655","https://openalex.org/W2163288162","https://openalex.org/W2166934660","https://openalex.org/W2168112956","https://openalex.org/W4248721357","https://openalex.org/W6629966464","https://openalex.org/W6636754427","https://openalex.org/W6663840415","https://openalex.org/W6678620355","https://openalex.org/W6682396209"],"related_works":["https://openalex.org/W4384788979","https://openalex.org/W2914048681","https://openalex.org/W2511178891","https://openalex.org/W2126676984","https://openalex.org/W2806679586","https://openalex.org/W178060743","https://openalex.org/W3216131935","https://openalex.org/W2909390414","https://openalex.org/W2954509079","https://openalex.org/W1984282557"],"abstract_inverted_index":{"MOTIVATION:":[0],"Automated":[1],"fluorescence":[2],"microscopes":[3],"produce":[4],"massive":[5],"amounts":[6],"of":[7,15,24,31,45,48,53,71,98,145,151,166,220,250],"images":[8,244],"observing":[9],"cells,":[10,35,205],"often":[11,78],"in":[12,68,115,130,137,179,194],"four":[13],"dimensions":[14],"space":[16],"and":[17,29,36,65,153,217,223,229],"time.":[18],"This":[19],"study":[20],"addresses":[21],"two":[22,161],"tasks":[23,150],"time-lapse":[25],"imaging":[26,44],"analyses;":[27],"detection":[28],"tracking":[30,76,154,184,237],"the":[32,87,111,131,138,141,146,155,167,173,180,191,200,215,221,226,230,234],"many":[33],"imaged":[34],"it":[37],"is":[38,239],"especially":[39],"intended":[40],"for":[41],"4D":[42],"live-cell":[43],"neuronal":[46],"nuclei":[47],"Caenorhabditis":[49],"elegans.":[50],"The":[51,105,127,149,164,183,236],"cells":[52,156,222],"interest":[54],"appear":[55],"as":[56],"slightly":[57],"deformed":[58],"ellipsoidal":[59],"forms.":[60],"They":[61],"are":[62,133,157,169,258],"densely":[63],"distributed,":[64],"move":[66],"rapidly":[67],"a":[69,91,123,208],"series":[70],"3D":[72,120,243],"images.":[73],"Thus,":[74],"existing":[75],"methods":[77],"fail":[79],"because":[80],"more":[81],"than":[82],"one":[83,95],"tracker":[84,92,201],"will":[85],"follow":[86],"same":[88],"target":[89],"or":[90],"transits":[93],"from":[94,202],"to":[96,117,135,176,189,213,224],"other":[97],"different":[99],"targets":[100],"during":[101],"rapid":[102],"moves.":[103],"RESULTS:":[104],"present":[106],"method":[107,175,185],"begins":[108],"by":[109,171],"performing":[110],"kernel":[112],"density":[113,147],"estimation":[114],"order":[116],"convert":[118],"each":[119,195,246],"image":[121,132,178,227],"into":[122],"smooth,":[124],"continuous":[125],"function.":[126,148],"cell":[128],"bodies":[129],"assumed":[134],"lie":[136],"regions":[139],"near":[140,190],"multiple":[142,204],"local":[143,192],"maxima":[144,193],"detecting":[152],"then":[158],"addressed":[159],"with":[160,241],"hill-climbing":[162],"algorithms.":[163],"positions":[165],"trackers":[168],"initialized":[170],"applying":[172],"cell-detection":[174],"an":[177],"first":[181],"frame.":[182],"keeps":[186],"attacking":[187],"them":[188],"subsequent":[196],"image.":[197],"To":[198],"prevent":[199],"following":[203],"we":[206],"use":[207],"Markov":[209],"random":[210],"field":[211],"(MRF)":[212],"model":[214],"spatial":[216],"temporal":[218],"covariation":[219],"maximize":[225],"forces":[228],"MRF-induced":[231],"constraint":[232],"on":[233],"trackers.":[235],"procedure":[238],"demonstrated":[240],"dynamic":[242],"that":[245],"contain":[247],">100":[248],"neurons":[249],"C.elegans.":[251],"AVAILABILITY:":[252],"http://daweb.ism.ac.jp/yoshidalab/crest/ismb2014":[253,261],"SUPPLEMENTARY":[254],"INFORMATION:":[255],"Supplementary":[256],"data":[257],"available":[259],"at":[260]},"counts_by_year":[{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":25},{"year":2019,"cited_by_count":3},{"year":2017,"cited_by_count":7},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":3}],"updated_date":"2026-06-16T07:32:37.131356","created_date":"2025-10-10T00:00:00"}
