{"id":"https://openalex.org/W2114792961","doi":"https://doi.org/10.1093/bioinformatics/btu208","title":"DSRC 2\u2014Industry-oriented compression of FASTQ files","display_name":"DSRC 2\u2014Industry-oriented compression of FASTQ files","publication_year":2014,"publication_date":"2014-04-18","ids":{"openalex":"https://openalex.org/W2114792961","doi":"https://doi.org/10.1093/bioinformatics/btu208","mag":"2114792961","pmid":"https://pubmed.ncbi.nlm.nih.gov/24747219"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btu208","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btu208","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/30/15/2213/48924887/bioinformatics_30_15_2213.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/30/15/2213/48924887/bioinformatics_30_15_2213.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5076395273","display_name":"\u0141ukasz Roguski","orcid":"https://orcid.org/0000-0003-2764-962X"},"institutions":[{"id":"https://openalex.org/I3017851245","display_name":"Polish-Japanese Academy of Information Technology","ror":"https://ror.org/01v542j61","country_code":"PL","type":"education","lineage":["https://openalex.org/I3017851245"]},{"id":"https://openalex.org/I119004910","display_name":"Silesian University of Technology","ror":"https://ror.org/02dyjk442","country_code":"PL","type":"education","lineage":["https://openalex.org/I119004910"]}],"countries":["PL"],"is_corresponding":true,"raw_author_name":"\u0141ukasz Roguski","raw_affiliation_strings":["1 Polish-Japanese Institute of Information Technology, 02-008 Warszawa and 2 Institute of Informatics, Silesian University of Technology, 44-100 Gliwice, Poland"],"affiliations":[{"raw_affiliation_string":"1 Polish-Japanese Institute of Information Technology, 02-008 Warszawa and 2 Institute of Informatics, Silesian University of Technology, 44-100 Gliwice, Poland","institution_ids":["https://openalex.org/I3017851245","https://openalex.org/I119004910"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5041822808","display_name":"Sebastian Deorowicz","orcid":"https://orcid.org/0000-0002-9496-733X"},"institutions":[{"id":"https://openalex.org/I3017851245","display_name":"Polish-Japanese Academy of Information Technology","ror":"https://ror.org/01v542j61","country_code":"PL","type":"education","lineage":["https://openalex.org/I3017851245"]},{"id":"https://openalex.org/I119004910","display_name":"Silesian University of Technology","ror":"https://ror.org/02dyjk442","country_code":"PL","type":"education","lineage":["https://openalex.org/I119004910"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Sebastian Deorowicz","raw_affiliation_strings":["1 Polish-Japanese Institute of Information Technology, 02-008 Warszawa and 2 Institute of Informatics, Silesian University of Technology, 44-100 Gliwice, Poland"],"affiliations":[{"raw_affiliation_string":"1 Polish-Japanese Institute of Information Technology, 02-008 Warszawa and 2 Institute of Informatics, Silesian University of Technology, 44-100 Gliwice, Poland","institution_ids":["https://openalex.org/I3017851245","https://openalex.org/I119004910"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5076395273"],"corresponding_institution_ids":["https://openalex.org/I119004910","https://openalex.org/I3017851245"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":14.4275,"has_fulltext":false,"cited_by_count":109,"citation_normalized_percentile":{"value":0.98954325,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":100},"biblio":{"volume":"30","issue":"15","first_page":"2213","last_page":"2215"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9976999759674072,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9976999759674072,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9937000274658203,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10602","display_name":"Glycosylation and Glycoproteins Research","score":0.9671000242233276,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7972246408462524},{"id":"https://openalex.org/keywords/python","display_name":"Python (programming language)","score":0.6804600954055786},{"id":"https://openalex.org/keywords/dedicated-short-range-communications","display_name":"Dedicated short-range communications","score":0.6416254043579102},{"id":"https://openalex.org/keywords/documentation","display_name":"Documentation","score":0.6129451990127563},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.5014257431030273},{"id":"https://openalex.org/keywords/huffman-coding","display_name":"Huffman coding","score":0.419586181640625},{"id":"https://openalex.org/keywords/data-compression","display_name":"Data compression","score":0.40101736783981323},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.3551161587238312},{"id":"https://openalex.org/keywords/embedded-system","display_name":"Embedded system","score":0.35395315289497375},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.3349109888076782},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.325020968914032},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.11120933294296265}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7972246408462524},{"id":"https://openalex.org/C519991488","wikidata":"https://www.wikidata.org/wiki/Q28865","display_name":"Python (programming language)","level":2,"score":0.6804600954055786},{"id":"https://openalex.org/C53140260","wikidata":"https://www.wikidata.org/wiki/Q1182198","display_name":"Dedicated short-range communications","level":3,"score":0.6416254043579102},{"id":"https://openalex.org/C56666940","wikidata":"https://www.wikidata.org/wiki/Q788790","display_name":"Documentation","level":2,"score":0.6129451990127563},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5014257431030273},{"id":"https://openalex.org/C46900642","wikidata":"https://www.wikidata.org/wiki/Q2647","display_name":"Huffman coding","level":3,"score":0.419586181640625},{"id":"https://openalex.org/C78548338","wikidata":"https://www.wikidata.org/wiki/Q2493","display_name":"Data compression","level":2,"score":0.40101736783981323},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3551161587238312},{"id":"https://openalex.org/C149635348","wikidata":"https://www.wikidata.org/wiki/Q193040","display_name":"Embedded system","level":1,"score":0.35395315289497375},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.3349109888076782},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.325020968914032},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.11120933294296265},{"id":"https://openalex.org/C555944384","wikidata":"https://www.wikidata.org/wiki/Q249","display_name":"Wireless","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004282","descriptor_name":"Documentation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004282","descriptor_name":"Documentation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004282","descriptor_name":"Documentation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007221","descriptor_name":"Industry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007221","descriptor_name":"Industry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007221","descriptor_name":"Industry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013997","descriptor_name":"Time Factors","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013997","descriptor_name":"Time Factors","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013997","descriptor_name":"Time Factors","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D044962","descriptor_name":"Data Compression","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D044962","descriptor_name":"Data Compression","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D044962","descriptor_name":"Data Compression","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btu208","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btu208","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/30/15/2213/48924887/bioinformatics_30_15_2213.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:24747219","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24747219","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btu208","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btu208","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/30/15/2213/48924887/bioinformatics_30_15_2213.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.6399999856948853,"display_name":"Industry, innovation and infrastructure","id":"https://metadata.un.org/sdg/9"}],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2114792961.pdf","grobid_xml":"https://content.openalex.org/works/W2114792961.grobid-xml"},"referenced_works_count":8,"referenced_works":["https://openalex.org/W1580101844","https://openalex.org/W1984017713","https://openalex.org/W2006088692","https://openalex.org/W2092880969","https://openalex.org/W2138196010","https://openalex.org/W2166588423","https://openalex.org/W2167943254","https://openalex.org/W2169873962"],"related_works":["https://openalex.org/W2011446102","https://openalex.org/W2337581757","https://openalex.org/W2158701093","https://openalex.org/W2352725890","https://openalex.org/W3119430538","https://openalex.org/W2756410301","https://openalex.org/W3028580730","https://openalex.org/W120892575","https://openalex.org/W2787192521","https://openalex.org/W2181792186"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2026,"cited_by_count":4},{"year":2025,"cited_by_count":9},{"year":2024,"cited_by_count":6},{"year":2023,"cited_by_count":6},{"year":2022,"cited_by_count":7},{"year":2021,"cited_by_count":11},{"year":2020,"cited_by_count":11},{"year":2019,"cited_by_count":12},{"year":2018,"cited_by_count":9},{"year":2017,"cited_by_count":11},{"year":2016,"cited_by_count":8},{"year":2015,"cited_by_count":14},{"year":2014,"cited_by_count":1}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2016-06-24T00:00:00"}
