{"id":"https://openalex.org/W2141298826","doi":"https://doi.org/10.1093/bioinformatics/btu203","title":"MRMPROBS suite for metabolomics using large-scale MRM assays","display_name":"MRMPROBS suite for metabolomics using large-scale MRM assays","publication_year":2014,"publication_date":"2014-04-20","ids":{"openalex":"https://openalex.org/W2141298826","doi":"https://doi.org/10.1093/bioinformatics/btu203","mag":"2141298826","pmid":"https://pubmed.ncbi.nlm.nih.gov/24753485"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btu203","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btu203","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/30/16/2379/48926198/bioinformatics_30_16_2379.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/30/16/2379/48926198/bioinformatics_30_16_2379.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5044693559","display_name":"Hiroshi Tsugawa","orcid":"https://orcid.org/0000-0002-2015-3958"},"institutions":[{"id":"https://openalex.org/I113198587","display_name":"National Institute of Genetics","ror":"https://ror.org/02xg1m795","country_code":"JP","type":"facility","lineage":["https://openalex.org/I113198587","https://openalex.org/I1319490839","https://openalex.org/I4210158934"]},{"id":"https://openalex.org/I4210100240","display_name":"RIKEN Center for Sustainable Resource Science","ror":"https://ror.org/010rf2m76","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4210100240","https://openalex.org/I4210110652"]},{"id":"https://openalex.org/I98285908","display_name":"Osaka University","ror":"https://ror.org/035t8zc32","country_code":"JP","type":"education","lineage":["https://openalex.org/I98285908"]}],"countries":["JP"],"is_corresponding":true,"raw_author_name":"Hiroshi Tsugawa","raw_affiliation_strings":["1 \u00a01RIKEN Center for Sustainable Resource Science, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan 2Department of Biotechnology, Graduate School of Engineering, Osaka University, Suita, Osaka 565-0871, Japan 3Reifycs Incorporated, 1-6-12 Nishishinbashi, Minato-ku, Tokyo 105-0003, Japan and 4National Institute of Genetics, Mishima, Shizuoka 411-8540, Japan"],"affiliations":[{"raw_affiliation_string":"1 \u00a01RIKEN Center for Sustainable Resource Science, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan 2Department of Biotechnology, Graduate School of Engineering, Osaka University, Suita, Osaka 565-0871, Japan 3Reifycs Incorporated, 1-6-12 Nishishinbashi, Minato-ku, Tokyo 105-0003, Japan and 4National Institute of Genetics, Mishima, Shizuoka 411-8540, Japan","institution_ids":["https://openalex.org/I113198587","https://openalex.org/I4210100240","https://openalex.org/I98285908"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087248445","display_name":"Mitsuhiro Kanazawa","orcid":null},"institutions":[{"id":"https://openalex.org/I98285908","display_name":"Osaka University","ror":"https://ror.org/035t8zc32","country_code":"JP","type":"education","lineage":["https://openalex.org/I98285908"]},{"id":"https://openalex.org/I113198587","display_name":"National Institute of Genetics","ror":"https://ror.org/02xg1m795","country_code":"JP","type":"facility","lineage":["https://openalex.org/I113198587","https://openalex.org/I1319490839","https://openalex.org/I4210158934"]},{"id":"https://openalex.org/I4210100240","display_name":"RIKEN Center for Sustainable Resource Science","ror":"https://ror.org/010rf2m76","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4210100240","https://openalex.org/I4210110652"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Mitsuhiro Kanazawa","raw_affiliation_strings":["1 \u00a01RIKEN Center for Sustainable Resource Science, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan 2Department of Biotechnology, Graduate School of Engineering, Osaka University, Suita, Osaka 565-0871, Japan 3Reifycs Incorporated, 1-6-12 Nishishinbashi, Minato-ku, Tokyo 105-0003, Japan and 4National Institute of Genetics, Mishima, Shizuoka 411-8540, Japan"],"affiliations":[{"raw_affiliation_string":"1 \u00a01RIKEN Center for Sustainable Resource Science, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan 2Department of Biotechnology, Graduate School of Engineering, Osaka University, Suita, Osaka 565-0871, Japan 3Reifycs Incorporated, 1-6-12 Nishishinbashi, Minato-ku, Tokyo 105-0003, Japan and 4National Institute of Genetics, Mishima, Shizuoka 411-8540, Japan","institution_ids":["https://openalex.org/I113198587","https://openalex.org/I4210100240","https://openalex.org/I98285908"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067322916","display_name":"Atsushi Ogiwara","orcid":null},"institutions":[{"id":"https://openalex.org/I113198587","display_name":"National Institute of Genetics","ror":"https://ror.org/02xg1m795","country_code":"JP","type":"facility","lineage":["https://openalex.org/I113198587","https://openalex.org/I1319490839","https://openalex.org/I4210158934"]},{"id":"https://openalex.org/I98285908","display_name":"Osaka University","ror":"https://ror.org/035t8zc32","country_code":"JP","type":"education","lineage":["https://openalex.org/I98285908"]},{"id":"https://openalex.org/I4210100240","display_name":"RIKEN Center for Sustainable Resource Science","ror":"https://ror.org/010rf2m76","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4210100240","https://openalex.org/I4210110652"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Atsushi Ogiwara","raw_affiliation_strings":["1 \u00a01RIKEN Center for Sustainable Resource Science, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan 2Department of Biotechnology, Graduate School of Engineering, Osaka University, Suita, Osaka 565-0871, Japan 3Reifycs Incorporated, 1-6-12 Nishishinbashi, Minato-ku, Tokyo 105-0003, Japan and 4National Institute of Genetics, Mishima, Shizuoka 411-8540, Japan"],"affiliations":[{"raw_affiliation_string":"1 \u00a01RIKEN Center for Sustainable Resource Science, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan 2Department of Biotechnology, Graduate School of Engineering, Osaka University, Suita, Osaka 565-0871, Japan 3Reifycs Incorporated, 1-6-12 Nishishinbashi, Minato-ku, Tokyo 105-0003, Japan and 4National Institute of Genetics, Mishima, Shizuoka 411-8540, Japan","institution_ids":["https://openalex.org/I113198587","https://openalex.org/I4210100240","https://openalex.org/I98285908"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5064001841","display_name":"Masanori Arita","orcid":"https://orcid.org/0000-0001-6706-0487"},"institutions":[{"id":"https://openalex.org/I113198587","display_name":"National Institute of Genetics","ror":"https://ror.org/02xg1m795","country_code":"JP","type":"facility","lineage":["https://openalex.org/I113198587","https://openalex.org/I1319490839","https://openalex.org/I4210158934"]},{"id":"https://openalex.org/I4210100240","display_name":"RIKEN Center for Sustainable Resource Science","ror":"https://ror.org/010rf2m76","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4210100240","https://openalex.org/I4210110652"]},{"id":"https://openalex.org/I98285908","display_name":"Osaka University","ror":"https://ror.org/035t8zc32","country_code":"JP","type":"education","lineage":["https://openalex.org/I98285908"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Masanori Arita","raw_affiliation_strings":["1 \u00a01RIKEN Center for Sustainable Resource Science, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan 2Department of Biotechnology, Graduate School of Engineering, Osaka University, Suita, Osaka 565-0871, Japan 3Reifycs Incorporated, 1-6-12 Nishishinbashi, Minato-ku, Tokyo 105-0003, Japan and 4National Institute of Genetics, Mishima, Shizuoka 411-8540, Japan"],"affiliations":[{"raw_affiliation_string":"1 \u00a01RIKEN Center for Sustainable Resource Science, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan 2Department of Biotechnology, Graduate School of Engineering, Osaka University, Suita, Osaka 565-0871, Japan 3Reifycs Incorporated, 1-6-12 Nishishinbashi, Minato-ku, Tokyo 105-0003, Japan and 4National Institute of Genetics, Mishima, Shizuoka 411-8540, Japan","institution_ids":["https://openalex.org/I113198587","https://openalex.org/I4210100240","https://openalex.org/I98285908"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5044693559"],"corresponding_institution_ids":["https://openalex.org/I113198587","https://openalex.org/I4210100240","https://openalex.org/I98285908"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":1.8538,"has_fulltext":true,"cited_by_count":106,"citation_normalized_percentile":{"value":0.85595407,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":100},"biblio":{"volume":"30","issue":"16","first_page":"2379","last_page":"2380"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10908","display_name":"Analytical Chemistry and Chromatography","score":0.9855999946594238,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11667","display_name":"Advanced Chemical Sensor Technologies","score":0.9837999939918518,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7010812759399414},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.6068850755691528},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.5349346995353699},{"id":"https://openalex.org/keywords/software-suite","display_name":"Software suite","score":0.5182121396064758},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.5074614882469177},{"id":"https://openalex.org/keywords/graphical-user-interface","display_name":"Graphical user interface","score":0.4656881093978882},{"id":"https://openalex.org/keywords/scale","display_name":"Scale (ratio)","score":0.4449017643928528},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.43477439880371094},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.4322876036167145},{"id":"https://openalex.org/keywords/mit-license","display_name":"MIT License","score":0.42389070987701416},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.41510581970214844},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.2672507166862488},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.10163065791130066}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7010812759399414},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.6068850755691528},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.5349346995353699},{"id":"https://openalex.org/C2778736646","wikidata":"https://www.wikidata.org/wiki/Q1143070","display_name":"Software suite","level":3,"score":0.5182121396064758},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.5074614882469177},{"id":"https://openalex.org/C37789001","wikidata":"https://www.wikidata.org/wiki/Q782543","display_name":"Graphical user interface","level":2,"score":0.4656881093978882},{"id":"https://openalex.org/C2778755073","wikidata":"https://www.wikidata.org/wiki/Q10858537","display_name":"Scale (ratio)","level":2,"score":0.4449017643928528},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.43477439880371094},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.4322876036167145},{"id":"https://openalex.org/C174183944","wikidata":"https://www.wikidata.org/wiki/Q334661","display_name":"MIT License","level":3,"score":0.42389070987701416},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.41510581970214844},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.2672507166862488},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.10163065791130066},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055432","descriptor_name":"Metabolomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D055432","descriptor_name":"Metabolomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D055432","descriptor_name":"Metabolomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btu203","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btu203","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/30/16/2379/48926198/bioinformatics_30_16_2379.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:24753485","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24753485","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btu203","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btu203","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/30/16/2379/48926198/bioinformatics_30_16_2379.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Industry, innovation and infrastructure","score":0.5799999833106995,"id":"https://metadata.un.org/sdg/9"}],"awards":[{"id":"https://openalex.org/G6267471473","display_name":null,"funder_award_id":"Grant-in-Aid","funder_id":"https://openalex.org/F4320320912","funder_display_name":"Ministry of Education, Culture, Sports, Science and Technology"},{"id":"https://openalex.org/G7599130655","display_name":null,"funder_award_id":"Grant","funder_id":"https://openalex.org/F4320320912","funder_display_name":"Ministry of Education, Culture, Sports, Science and Technology"}],"funders":[{"id":"https://openalex.org/F4320320912","display_name":"Ministry of Education, Culture, Sports, Science and Technology","ror":"https://ror.org/048rj2z13"},{"id":"https://openalex.org/F4320338124","display_name":"Strategic International Collaborative Research Program","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2141298826.pdf","grobid_xml":"https://content.openalex.org/works/W2141298826.grobid-xml"},"referenced_works_count":7,"referenced_works":["https://openalex.org/W1966205618","https://openalex.org/W1984926446","https://openalex.org/W2023535481","https://openalex.org/W2024081693","https://openalex.org/W2037833102","https://openalex.org/W2081465448","https://openalex.org/W2109606373"],"related_works":["https://openalex.org/W2098339479","https://openalex.org/W3214341251","https://openalex.org/W2604408404","https://openalex.org/W1981336497","https://openalex.org/W4200403781","https://openalex.org/W1985445940","https://openalex.org/W2146567033","https://openalex.org/W2133233871","https://openalex.org/W3217131165","https://openalex.org/W4297965067"],"abstract_inverted_index":{"MRMPROBS":[0],"is":[1],"available":[2],"for":[3],"Windows":[4],"OS":[5],"under":[6],"the":[7],"creative-commons":[8],"by-attribution":[9],"license":[10],"at":[11],"http://prime.psc.riken.jp.":[12]},"counts_by_year":[{"year":2026,"cited_by_count":5},{"year":2025,"cited_by_count":12},{"year":2024,"cited_by_count":13},{"year":2023,"cited_by_count":7},{"year":2022,"cited_by_count":34},{"year":2021,"cited_by_count":7},{"year":2020,"cited_by_count":8},{"year":2019,"cited_by_count":4},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":5},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":6}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
