{"id":"https://openalex.org/W2122231878","doi":"https://doi.org/10.1093/bioinformatics/btu105","title":"Challenges in RNA virus bioinformatics","display_name":"Challenges in RNA virus bioinformatics","publication_year":2014,"publication_date":"2014-03-03","ids":{"openalex":"https://openalex.org/W2122231878","doi":"https://doi.org/10.1093/bioinformatics/btu105","mag":"2122231878","pmid":"https://pubmed.ncbi.nlm.nih.gov/24590443"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btu105","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btu105","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/30/13/1793/17140911/btu105.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"review","indexed_in":["crossref","datacite","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/30/13/1793/17140911/btu105.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5041475009","display_name":"Manja Marz","orcid":"https://orcid.org/0000-0003-4783-8823"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I153845743","display_name":"Moscow Institute of Physics and Technology","ror":"https://ror.org/00v0z9322","country_code":"RU","type":"education","lineage":["https://openalex.org/I153845743"]},{"id":"https://openalex.org/I2799391451","display_name":"University Hospital Bonn","ror":"https://ror.org/01xnwqx93","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2799391451"]},{"id":"https://openalex.org/I3018134672","display_name":"Helmholtz Zentrum M\u00fcnchen","ror":"https://ror.org/00cfam450","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I3018134672"]},{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]},{"id":"https://openalex.org/I4210100097","display_name":"Institute of Bioinformatics and Systems Biology","ror":"https://ror.org/0127fwn18","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I3018134672","https://openalex.org/I4210100097"]},{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]},{"id":"https://openalex.org/I76198965","display_name":"Friedrich Schiller University Jena","ror":"https://ror.org/05qpz1x62","country_code":"DE","type":"education","lineage":["https://openalex.org/I76198965"]}],"countries":["CH","DE","RU"],"is_corresponding":true,"raw_author_name":"Manja Marz","raw_affiliation_strings":["1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and","1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and Computer Science, Insti"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and","institution_ids":["https://openalex.org/I76198965","https://openalex.org/I153845743"]},{"raw_affiliation_string":"1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and Computer Science, Insti","institution_ids":["https://openalex.org/I4210100097","https://openalex.org/I12708293","https://openalex.org/I153845743","https://openalex.org/I3018134672","https://openalex.org/I76198965","https://openalex.org/I35440088","https://openalex.org/I2799391451","https://openalex.org/I62916508"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035497488","display_name":"Niko Beerenwinkel","orcid":"https://orcid.org/0000-0002-0573-6119"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I153845743","display_name":"Moscow Institute of Physics and Technology","ror":"https://ror.org/00v0z9322","country_code":"RU","type":"education","lineage":["https://openalex.org/I153845743"]},{"id":"https://openalex.org/I2799391451","display_name":"University Hospital Bonn","ror":"https://ror.org/01xnwqx93","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2799391451"]},{"id":"https://openalex.org/I3018134672","display_name":"Helmholtz Zentrum M\u00fcnchen","ror":"https://ror.org/00cfam450","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I3018134672"]},{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]},{"id":"https://openalex.org/I4210100097","display_name":"Institute of Bioinformatics and Systems Biology","ror":"https://ror.org/0127fwn18","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I3018134672","https://openalex.org/I4210100097"]},{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]},{"id":"https://openalex.org/I76198965","display_name":"Friedrich Schiller University Jena","ror":"https://ror.org/05qpz1x62","country_code":"DE","type":"education","lineage":["https://openalex.org/I76198965"]}],"countries":["CH","DE","RU"],"is_corresponding":false,"raw_author_name":"Niko Beerenwinkel","raw_affiliation_strings":["1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and","1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and Computer Science, Insti"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and","institution_ids":["https://openalex.org/I76198965","https://openalex.org/I153845743"]},{"raw_affiliation_string":"1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and Computer Science, Insti","institution_ids":["https://openalex.org/I4210100097","https://openalex.org/I12708293","https://openalex.org/I153845743","https://openalex.org/I3018134672","https://openalex.org/I76198965","https://openalex.org/I35440088","https://openalex.org/I2799391451","https://openalex.org/I62916508"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011461272","display_name":"Christian Drosten","orcid":"https://orcid.org/0000-0001-7923-0519"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I153845743","display_name":"Moscow Institute of Physics and Technology","ror":"https://ror.org/00v0z9322","country_code":"RU","type":"education","lineage":["https://openalex.org/I153845743"]},{"id":"https://openalex.org/I2799391451","display_name":"University Hospital Bonn","ror":"https://ror.org/01xnwqx93","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2799391451"]},{"id":"https://openalex.org/I3018134672","display_name":"Helmholtz Zentrum M\u00fcnchen","ror":"https://ror.org/00cfam450","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I3018134672"]},{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]},{"id":"https://openalex.org/I4210100097","display_name":"Institute of Bioinformatics and Systems Biology","ror":"https://ror.org/0127fwn18","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I3018134672","https://openalex.org/I4210100097"]},{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]},{"id":"https://openalex.org/I76198965","display_name":"Friedrich Schiller University Jena","ror":"https://ror.org/05qpz1x62","country_code":"DE","type":"education","lineage":["https://openalex.org/I76198965"]}],"countries":["CH","DE","RU"],"is_corresponding":false,"raw_author_name":"Christian Drosten","raw_affiliation_strings":["1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and","1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and Computer Science, Insti"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and","institution_ids":["https://openalex.org/I76198965","https://openalex.org/I153845743"]},{"raw_affiliation_string":"1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and Computer Science, Insti","institution_ids":["https://openalex.org/I4210100097","https://openalex.org/I12708293","https://openalex.org/I153845743","https://openalex.org/I3018134672","https://openalex.org/I76198965","https://openalex.org/I35440088","https://openalex.org/I2799391451","https://openalex.org/I62916508"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028802154","display_name":"Markus Fricke","orcid":null},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I153845743","display_name":"Moscow Institute of Physics and Technology","ror":"https://ror.org/00v0z9322","country_code":"RU","type":"education","lineage":["https://openalex.org/I153845743"]},{"id":"https://openalex.org/I2799391451","display_name":"University Hospital Bonn","ror":"https://ror.org/01xnwqx93","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2799391451"]},{"id":"https://openalex.org/I3018134672","display_name":"Helmholtz Zentrum M\u00fcnchen","ror":"https://ror.org/00cfam450","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I3018134672"]},{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]},{"id":"https://openalex.org/I4210100097","display_name":"Institute of Bioinformatics and Systems Biology","ror":"https://ror.org/0127fwn18","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I3018134672","https://openalex.org/I4210100097"]},{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]},{"id":"https://openalex.org/I76198965","display_name":"Friedrich Schiller University Jena","ror":"https://ror.org/05qpz1x62","country_code":"DE","type":"education","lineage":["https://openalex.org/I76198965"]}],"countries":["CH","DE","RU"],"is_corresponding":false,"raw_author_name":"Markus Fricke","raw_affiliation_strings":["1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and","1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and Computer Science, Insti"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and","institution_ids":["https://openalex.org/I76198965","https://openalex.org/I153845743"]},{"raw_affiliation_string":"1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and Computer Science, Insti","institution_ids":["https://openalex.org/I4210100097","https://openalex.org/I12708293","https://openalex.org/I153845743","https://openalex.org/I3018134672","https://openalex.org/I76198965","https://openalex.org/I35440088","https://openalex.org/I2799391451","https://openalex.org/I62916508"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060795824","display_name":"Dmitrij Frishman","orcid":"https://orcid.org/0000-0002-9006-4707"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I153845743","display_name":"Moscow Institute of Physics and Technology","ror":"https://ror.org/00v0z9322","country_code":"RU","type":"education","lineage":["https://openalex.org/I153845743"]},{"id":"https://openalex.org/I2799391451","display_name":"University Hospital Bonn","ror":"https://ror.org/01xnwqx93","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2799391451"]},{"id":"https://openalex.org/I3018134672","display_name":"Helmholtz Zentrum M\u00fcnchen","ror":"https://ror.org/00cfam450","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I3018134672"]},{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]},{"id":"https://openalex.org/I4210100097","display_name":"Institute of Bioinformatics and Systems Biology","ror":"https://ror.org/0127fwn18","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I3018134672","https://openalex.org/I4210100097"]},{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]},{"id":"https://openalex.org/I76198965","display_name":"Friedrich Schiller University Jena","ror":"https://ror.org/05qpz1x62","country_code":"DE","type":"education","lineage":["https://openalex.org/I76198965"]}],"countries":["CH","DE","RU"],"is_corresponding":false,"raw_author_name":"Dmitrij Frishman","raw_affiliation_strings":["1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and","1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and Computer Science, Insti"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and","institution_ids":["https://openalex.org/I76198965","https://openalex.org/I153845743"]},{"raw_affiliation_string":"1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and Computer Science, Insti","institution_ids":["https://openalex.org/I4210100097","https://openalex.org/I12708293","https://openalex.org/I153845743","https://openalex.org/I3018134672","https://openalex.org/I76198965","https://openalex.org/I35440088","https://openalex.org/I2799391451","https://openalex.org/I62916508"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011771355","display_name":"Ivo L. Hofacker","orcid":"https://orcid.org/0000-0001-7132-0800"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I153845743","display_name":"Moscow Institute of Physics and Technology","ror":"https://ror.org/00v0z9322","country_code":"RU","type":"education","lineage":["https://openalex.org/I153845743"]},{"id":"https://openalex.org/I2799391451","display_name":"University Hospital Bonn","ror":"https://ror.org/01xnwqx93","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2799391451"]},{"id":"https://openalex.org/I3018134672","display_name":"Helmholtz Zentrum M\u00fcnchen","ror":"https://ror.org/00cfam450","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I3018134672"]},{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]},{"id":"https://openalex.org/I4210100097","display_name":"Institute of Bioinformatics and Systems Biology","ror":"https://ror.org/0127fwn18","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I3018134672","https://openalex.org/I4210100097"]},{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]},{"id":"https://openalex.org/I76198965","display_name":"Friedrich Schiller University Jena","ror":"https://ror.org/05qpz1x62","country_code":"DE","type":"education","lineage":["https://openalex.org/I76198965"]}],"countries":["CH","DE","RU"],"is_corresponding":false,"raw_author_name":"Ivo L. Hofacker","raw_affiliation_strings":["1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and","1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and Computer Science, Insti"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and","institution_ids":["https://openalex.org/I76198965","https://openalex.org/I153845743"]},{"raw_affiliation_string":"1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and Computer Science, Insti","institution_ids":["https://openalex.org/I4210100097","https://openalex.org/I12708293","https://openalex.org/I153845743","https://openalex.org/I3018134672","https://openalex.org/I76198965","https://openalex.org/I35440088","https://openalex.org/I2799391451","https://openalex.org/I62916508"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044970240","display_name":"Dieter Hoffmann","orcid":"https://orcid.org/0000-0003-3566-3341"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I153845743","display_name":"Moscow Institute of Physics and Technology","ror":"https://ror.org/00v0z9322","country_code":"RU","type":"education","lineage":["https://openalex.org/I153845743"]},{"id":"https://openalex.org/I2799391451","display_name":"University Hospital Bonn","ror":"https://ror.org/01xnwqx93","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2799391451"]},{"id":"https://openalex.org/I3018134672","display_name":"Helmholtz Zentrum M\u00fcnchen","ror":"https://ror.org/00cfam450","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I3018134672"]},{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]},{"id":"https://openalex.org/I4210100097","display_name":"Institute of Bioinformatics and Systems Biology","ror":"https://ror.org/0127fwn18","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I3018134672","https://openalex.org/I4210100097"]},{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]},{"id":"https://openalex.org/I76198965","display_name":"Friedrich Schiller University Jena","ror":"https://ror.org/05qpz1x62","country_code":"DE","type":"education","lineage":["https://openalex.org/I76198965"]}],"countries":["CH","DE","RU"],"is_corresponding":false,"raw_author_name":"Dieter Hoffmann","raw_affiliation_strings":["1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and","1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and Computer Science, Insti"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and","institution_ids":["https://openalex.org/I76198965","https://openalex.org/I153845743"]},{"raw_affiliation_string":"1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and Computer Science, Insti","institution_ids":["https://openalex.org/I4210100097","https://openalex.org/I12708293","https://openalex.org/I153845743","https://openalex.org/I3018134672","https://openalex.org/I76198965","https://openalex.org/I35440088","https://openalex.org/I2799391451","https://openalex.org/I62916508"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016253883","display_name":"Martin Middendorf","orcid":"https://orcid.org/0000-0002-5426-1092"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I153845743","display_name":"Moscow Institute of Physics and Technology","ror":"https://ror.org/00v0z9322","country_code":"RU","type":"education","lineage":["https://openalex.org/I153845743"]},{"id":"https://openalex.org/I2799391451","display_name":"University Hospital Bonn","ror":"https://ror.org/01xnwqx93","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2799391451"]},{"id":"https://openalex.org/I3018134672","display_name":"Helmholtz Zentrum M\u00fcnchen","ror":"https://ror.org/00cfam450","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I3018134672"]},{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]},{"id":"https://openalex.org/I4210100097","display_name":"Institute of Bioinformatics and Systems Biology","ror":"https://ror.org/0127fwn18","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I3018134672","https://openalex.org/I4210100097"]},{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]},{"id":"https://openalex.org/I76198965","display_name":"Friedrich Schiller University Jena","ror":"https://ror.org/05qpz1x62","country_code":"DE","type":"education","lineage":["https://openalex.org/I76198965"]}],"countries":["CH","DE","RU"],"is_corresponding":false,"raw_author_name":"Martin Middendorf","raw_affiliation_strings":["1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and","1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and Computer Science, Insti"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and","institution_ids":["https://openalex.org/I76198965","https://openalex.org/I153845743"]},{"raw_affiliation_string":"1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and Computer Science, Insti","institution_ids":["https://openalex.org/I4210100097","https://openalex.org/I12708293","https://openalex.org/I153845743","https://openalex.org/I3018134672","https://openalex.org/I76198965","https://openalex.org/I35440088","https://openalex.org/I2799391451","https://openalex.org/I62916508"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051653794","display_name":"Thomas Rattei","orcid":"https://orcid.org/0000-0002-0592-7791"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I153845743","display_name":"Moscow Institute of Physics and Technology","ror":"https://ror.org/00v0z9322","country_code":"RU","type":"education","lineage":["https://openalex.org/I153845743"]},{"id":"https://openalex.org/I2799391451","display_name":"University Hospital Bonn","ror":"https://ror.org/01xnwqx93","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2799391451"]},{"id":"https://openalex.org/I3018134672","display_name":"Helmholtz Zentrum M\u00fcnchen","ror":"https://ror.org/00cfam450","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I3018134672"]},{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]},{"id":"https://openalex.org/I4210100097","display_name":"Institute of Bioinformatics and Systems Biology","ror":"https://ror.org/0127fwn18","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I3018134672","https://openalex.org/I4210100097"]},{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]},{"id":"https://openalex.org/I76198965","display_name":"Friedrich Schiller University Jena","ror":"https://ror.org/05qpz1x62","country_code":"DE","type":"education","lineage":["https://openalex.org/I76198965"]}],"countries":["CH","DE","RU"],"is_corresponding":false,"raw_author_name":"Thomas Rattei","raw_affiliation_strings":["1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and","1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and Computer Science, Insti"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and","institution_ids":["https://openalex.org/I76198965","https://openalex.org/I153845743"]},{"raw_affiliation_string":"1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and Computer Science, Insti","institution_ids":["https://openalex.org/I4210100097","https://openalex.org/I12708293","https://openalex.org/I153845743","https://openalex.org/I3018134672","https://openalex.org/I76198965","https://openalex.org/I35440088","https://openalex.org/I2799391451","https://openalex.org/I62916508"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016104736","display_name":"Peter F. Stadler","orcid":"https://orcid.org/0000-0002-5016-5191"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I153845743","display_name":"Moscow Institute of Physics and Technology","ror":"https://ror.org/00v0z9322","country_code":"RU","type":"education","lineage":["https://openalex.org/I153845743"]},{"id":"https://openalex.org/I2799391451","display_name":"University Hospital Bonn","ror":"https://ror.org/01xnwqx93","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2799391451"]},{"id":"https://openalex.org/I3018134672","display_name":"Helmholtz Zentrum M\u00fcnchen","ror":"https://ror.org/00cfam450","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I3018134672"]},{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]},{"id":"https://openalex.org/I4210100097","display_name":"Institute of Bioinformatics and Systems Biology","ror":"https://ror.org/0127fwn18","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I3018134672","https://openalex.org/I4210100097"]},{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]},{"id":"https://openalex.org/I76198965","display_name":"Friedrich Schiller University Jena","ror":"https://ror.org/05qpz1x62","country_code":"DE","type":"education","lineage":["https://openalex.org/I76198965"]}],"countries":["CH","DE","RU"],"is_corresponding":false,"raw_author_name":"Peter F. Stadler","raw_affiliation_strings":["1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and","1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and Computer Science, Insti"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and","institution_ids":["https://openalex.org/I76198965","https://openalex.org/I153845743"]},{"raw_affiliation_string":"1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and Computer Science, Insti","institution_ids":["https://openalex.org/I4210100097","https://openalex.org/I12708293","https://openalex.org/I153845743","https://openalex.org/I3018134672","https://openalex.org/I76198965","https://openalex.org/I35440088","https://openalex.org/I2799391451","https://openalex.org/I62916508"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5060717574","display_name":"Armin T\u00f6pfer","orcid":"https://orcid.org/0000-0003-1637-1466"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I153845743","display_name":"Moscow Institute of Physics and Technology","ror":"https://ror.org/00v0z9322","country_code":"RU","type":"education","lineage":["https://openalex.org/I153845743"]},{"id":"https://openalex.org/I2799391451","display_name":"University Hospital Bonn","ror":"https://ror.org/01xnwqx93","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2799391451"]},{"id":"https://openalex.org/I3018134672","display_name":"Helmholtz Zentrum M\u00fcnchen","ror":"https://ror.org/00cfam450","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I3018134672"]},{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]},{"id":"https://openalex.org/I4210100097","display_name":"Institute of Bioinformatics and Systems Biology","ror":"https://ror.org/0127fwn18","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I3018134672","https://openalex.org/I4210100097"]},{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]},{"id":"https://openalex.org/I76198965","display_name":"Friedrich Schiller University Jena","ror":"https://ror.org/05qpz1x62","country_code":"DE","type":"education","lineage":["https://openalex.org/I76198965"]}],"countries":["CH","DE","RU"],"is_corresponding":false,"raw_author_name":"Armin T\u00f6pfer","raw_affiliation_strings":["1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and","1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and Computer Science, Insti"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and","institution_ids":["https://openalex.org/I76198965","https://openalex.org/I153845743"]},{"raw_affiliation_string":"1 Friedrich-Schiller-University Jena, Faculty of Mathematics und Computer Science, Leutragraben 1, 07743 Jena, Germany, 2 Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 3 SIB Swiss Institute of Bioinformatics, CH-4058 Basel, Switzerland, 4 Universit\u00e4tsklinikum Bonn, Institut f\u00fcr Virologie, Sigmund-Freud-Str. 25, 53127 Bonn, 5 Technische Universit\u00e4t Muenchen, Wissenschaftszentrum Weihenstephan, Am Forum 1, 85354 Freising, 6 Helmholtz Center Munich\u2013German Research Center for Environmental Health (GmbH), Institute of Bioinformatics and Systems Biology, Ingolst\u00e4dter Landstra\u00dfe 1, D-85764 Neuherberg, Germany, 7 Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia, 8 Institut f\u00fcr theoretische Chemie, Universit\u00e4t Wien, W\u00e4hringerstra\u00dfe 17, A-1090 Wien, Austria, 9 Institute of Virology, Technical University of Munich, Trogerstr. 30, 81675 M\u00fcnchen, Germany, 10 University of Leipzig, Faculty of Mathematics and Computer Science, Insti","institution_ids":["https://openalex.org/I4210100097","https://openalex.org/I12708293","https://openalex.org/I153845743","https://openalex.org/I3018134672","https://openalex.org/I76198965","https://openalex.org/I35440088","https://openalex.org/I2799391451","https://openalex.org/I62916508"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":11,"corresponding_author_ids":["https://openalex.org/A5041475009"],"corresponding_institution_ids":["https://openalex.org/I12708293","https://openalex.org/I153845743","https://openalex.org/I2799391451","https://openalex.org/I3018134672","https://openalex.org/I35440088","https://openalex.org/I4210100097","https://openalex.org/I62916508","https://openalex.org/I76198965"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":1.9917,"has_fulltext":true,"cited_by_count":62,"citation_normalized_percentile":{"value":0.86558435,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"30","issue":"13","first_page":"1793","last_page":"1799"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.3025999963283539,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.3025999963283539,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11048","display_name":"Bacteriophages and microbial interactions","score":0.2703000009059906,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.041200000792741776,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.5227625370025635},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.5183014273643494},{"id":"https://openalex.org/keywords/presentation","display_name":"Presentation (obstetrics)","score":0.4927370846271515},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.46649619936943054},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4343603253364563},{"id":"https://openalex.org/keywords/dna-sequencing","display_name":"DNA sequencing","score":0.43292665481567383},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.41108155250549316},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.41046109795570374},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.40814268589019775},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.35124653577804565},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3485938310623169},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.18237146735191345},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.16864410042762756}],"concepts":[{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.5227625370025635},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5183014273643494},{"id":"https://openalex.org/C2777601897","wikidata":"https://www.wikidata.org/wiki/Q3409113","display_name":"Presentation (obstetrics)","level":2,"score":0.4927370846271515},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.46649619936943054},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4343603253364563},{"id":"https://openalex.org/C51679486","wikidata":"https://www.wikidata.org/wiki/Q380546","display_name":"DNA sequencing","level":3,"score":0.43292665481567383},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.41108155250549316},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.41046109795570374},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.40814268589019775},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.35124653577804565},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3485938310623169},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.18237146735191345},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.16864410042762756},{"id":"https://openalex.org/C126838900","wikidata":"https://www.wikidata.org/wiki/Q77604","display_name":"Radiology","level":1,"score":0.0},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012328","descriptor_name":"RNA Viruses","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012328","descriptor_name":"RNA Viruses","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012328","descriptor_name":"RNA Viruses","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012367","descriptor_name":"RNA, Viral","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012367","descriptor_name":"RNA, Viral","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012367","descriptor_name":"RNA, Viral","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012367","descriptor_name":"RNA, Viral","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012367","descriptor_name":"RNA, Viral","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012367","descriptor_name":"RNA, Viral","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D019143","descriptor_name":"Evolution, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019143","descriptor_name":"Evolution, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019143","descriptor_name":"Evolution, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":11,"locations":[{"id":"doi:10.1093/bioinformatics/btu105","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btu105","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/30/13/1793/17140911/btu105.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:24590443","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24590443","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:www.zora.uzh.ch:154825","is_oa":true,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4306401281","display_name":"Zurich Open Repository and Archive (University of Zurich)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I202697423","host_organization_name":"University of Zurich","host_organization_lineage":["https://openalex.org/I202697423"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Marz, Manja; Beerenwinkel, Niko; Drosten, Christian; Fricke, Markus; Frishman, Dmitrij; Hofacker, Ivo L; Hoffmann, Dieter; Middendorf, Martin; Rattei, Thomas; Stadler, Peter F; T\u00f6pfer, Armin  (2014). Challenges in RNA virus bioinformatics.  Bioinformatics, 30(13):1793-1799.","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.940.3903","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.940.3903","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://bioinformatics.oxfordjournals.org/content/early/2014/03/14/bioinformatics.btu105.full.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.960.4220","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.960.4220","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://bioinformatics.oxfordjournals.org/content/early/2014/03/03/bioinformatics.btu105.full.pdf","raw_type":"text"},{"id":"pmh:oai:edoc.mpg.de:708487","is_oa":false,"landing_page_url":"http://edoc.mpg.de/708487","pdf_url":null,"source":{"id":"https://openalex.org/S4406922265","display_name":"Max Planck Institute for Plasma Physics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics, v.30, 1793-1799 (2014)","raw_type":"Article"},{"id":"pmh:oai:europepmc.org:6068340","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7110044","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:opus-zb.helmholtz-muenchen.de:30770","is_oa":false,"landing_page_url":"https://push-zb.helmholtz-muenchen.de/frontdoor.php?source_opus=30770","pdf_url":null,"source":{"id":"https://openalex.org/S4377196115","display_name":"Site cant be reached","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics 30, 1793-1799 (2014)","raw_type":"article"},{"id":"pmh:oai:www.research-collection.ethz.ch:20.500.11850/86390","is_oa":true,"landing_page_url":"http://hdl.handle.net/20.500.11850/86390","pdf_url":null,"source":{"id":"https://openalex.org/S4306402302","display_name":"Repository for Publications and Research Data (ETH Zurich)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I35440088","host_organization_name":"ETH Zurich","host_organization_lineage":["https://openalex.org/I35440088"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics, 30 (13)","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"doi:10.3929/ethz-b-000086390","is_oa":true,"landing_page_url":"https://doi.org/10.3929/ethz-b-000086390","pdf_url":null,"source":{"id":"https://openalex.org/S7407051236","display_name":"ETH Z\u00fcrich Research Collection","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article-journal"},{"id":"doi:10.5167/uzh-154825","is_oa":true,"landing_page_url":"https://doi.org/10.5167/uzh-154825","pdf_url":null,"source":{"id":"https://openalex.org/S7407051291","display_name":"Universit\u00e4t Z\u00fcrich, ZORA","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article-journal"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btu105","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btu105","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/30/13/1793/17140911/btu105.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/15","score":0.4699999988079071,"display_name":"Life in Land"}],"awards":[{"id":"https://openalex.org/G4549481004","display_name":null,"funder_award_id":"MI 439/14-1","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G5281118731","display_name":null,"funder_award_id":"SPP 1596","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G7578079922","display_name":null,"funder_award_id":"/14-1","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320320879","display_name":"Deutsche Forschungsgemeinschaft","ror":"https://ror.org/018mejw64"},{"id":"https://openalex.org/F4320320924","display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung","ror":"https://ror.org/00yjd3n13"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2122231878.pdf","grobid_xml":"https://content.openalex.org/works/W2122231878.grobid-xml"},"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W4387426029","https://openalex.org/W4254162896","https://openalex.org/W1477999932","https://openalex.org/W4388792380","https://openalex.org/W4386731653","https://openalex.org/W2376001620","https://openalex.org/W2925303117","https://openalex.org/W4285219045","https://openalex.org/W3167529338","https://openalex.org/W2380556100"],"abstract_inverted_index":{"MOTIVATION:":[0],"Computer-assisted":[1],"studies":[2],"of":[3,8,14,18,41,90,96,113,147,172],"structure,":[4],"function":[5],"and":[6,23,33,66,110,139,149,166,170],"evolution":[7,171],"viruses":[9,82,121],"remains":[10],"a":[11],"neglected":[12],"area":[13],"research.":[15],"The":[16,94],"attention":[17],"bioinformaticians":[19],"to":[20,62,100,125,131],"this":[21,97],"interesting":[22],"challenging":[24],"field":[25],"is":[26,37,99],"far":[27],"from":[28],"commensurate":[29],"with":[30,58],"its":[31],"medical":[32],"biotechnological":[34],"importance.":[35],"It":[36],"telling":[38],"that":[39,122],"out":[40],">200":[42],"talks":[43],"held":[44],"at":[45],"ISMB":[46],"2013,":[47],"the":[48,88,107,168],"largest":[49],"international":[50],"bioinformatics":[51,68,104,128],"conference,":[52],"only":[53],"one":[54],"presentation":[55],"explicitly":[56],"dealt":[57],"viruses.":[59,173],"In":[60],"contrast":[61],"many":[63,126],"broad,":[64],"established":[65],"well-organized":[67],"communities":[69],"(e.g.":[70],"structural":[71],"genomics,":[72],"ontologies,":[73],"next-generation":[74],"sequencing,":[75],"expression":[76],"analysis),":[77],"research":[78],"groups":[79],"focusing":[80],"on":[81,87,119],"can":[83],"probably":[84],"be":[85],"counted":[86],"fingers":[89],"two":[91],"hands.":[92],"RESULTS:":[93],"purpose":[95],"review":[98],"increase":[101],"awareness":[102],"among":[103],"researchers":[105],"about":[106],"pressing":[108],"needs":[109],"unsolved":[111],"problems":[112,124],"computational":[114],"virology.":[115],"We":[116,143],"focus":[117],"primarily":[118],"RNA":[120,159],"pose":[123],"standard":[127],"analyses":[129],"owing":[130],"their":[132],"compact":[133],"genome":[134],"organization,":[135],"fast":[136],"mutation":[137],"rate":[138],"low":[140],"evolutionary":[141],"conservation.":[142],"provide":[144],"an":[145],"overview":[146],"tools":[148],"algorithms":[150],"for":[151],"handling":[152],"viral":[153,162],"sequencing":[154],"data,":[155],"detecting":[156],"functionally":[157],"important":[158],"structures,":[160],"classifying":[161],"proteins":[163],"into":[164],"families":[165],"investigating":[167],"origin":[169]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":6},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":9},{"year":2021,"cited_by_count":9},{"year":2020,"cited_by_count":5},{"year":2019,"cited_by_count":6},{"year":2018,"cited_by_count":5},{"year":2017,"cited_by_count":5},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":5},{"year":2014,"cited_by_count":1}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
