{"id":"https://openalex.org/W2132293925","doi":"https://doi.org/10.1093/bioinformatics/btu072","title":"SegAnnDB: interactive Web-based genomic segmentation","display_name":"SegAnnDB: interactive Web-based genomic segmentation","publication_year":2014,"publication_date":"2014-02-03","ids":{"openalex":"https://openalex.org/W2132293925","doi":"https://doi.org/10.1093/bioinformatics/btu072","mag":"2132293925","pmid":"https://pubmed.ncbi.nlm.nih.gov/24493034"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btu072","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btu072","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/30/11/1539/48928420/bioinformatics_30_11_1539.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/30/11/1539/48928420/bioinformatics_30_11_1539.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5035679840","display_name":"Toby Dylan Hocking","orcid":"https://orcid.org/0000-0002-3146-0865"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I4210161954","display_name":"D\u00e9partement d'Informatique","ror":"https://ror.org/05y6rqs46","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I2746051580","https://openalex.org/I29607241","https://openalex.org/I4210159245","https://openalex.org/I4210161954"]},{"id":"https://openalex.org/I70768539","display_name":"\u00c9cole Nationale Sup\u00e9rieure des Mines de Paris","ror":"https://ror.org/04y8cs423","country_code":"FR","type":"education","lineage":["https://openalex.org/I190752583","https://openalex.org/I2746051580","https://openalex.org/I70768539"]},{"id":"https://openalex.org/I80043","display_name":"Institut Curie","ror":"https://ror.org/04t0gwh46","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I80043"]},{"id":"https://openalex.org/I88467170","display_name":"Universit\u00e9 d'\u00c9vry Val-d'Essonne","ror":"https://ror.org/00e96v939","country_code":"FR","type":"education","lineage":["https://openalex.org/I277688954","https://openalex.org/I88467170"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Toby D. Hocking","raw_affiliation_strings":["1 Department of Computer Science, Tokyo Institute of Technology, Tokyo 152-8552, Japan, 2Institut Curie, 26 rue d\u2019Ulm, 75248 Paris Cedex 05, 3INSERM U900, Paris F-75248, France, 4Mines ParisTech, Centre for Computational Biology, 77300 Fontainebleau, 5Unit\u00e9 de Recherche en G\u00e9nomique V\u00e9g\u00e9tale INRA-CNRS-Universit\u00e9 d\u2019Evry Val d\u2019Essonne, \u00c9vry 91057, France, 6INSERM U830, Paris F-75248, France, 7Aichi Cancer Center Research Institute, 1-1 Kanokoden, Chikusa-ku, Nagoya-city 464-8681, Japan and 8INRIA\u2013Sierra Project-Team, D\u00e9partement d\u2019Informatique de l\u2019\u00c9cole Normale Sup\u00e9rieure, Paris F-75013, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Computer Science, Tokyo Institute of Technology, Tokyo 152-8552, Japan, 2Institut Curie, 26 rue d\u2019Ulm, 75248 Paris Cedex 05, 3INSERM U900, Paris F-75248, France, 4Mines ParisTech, Centre for Computational Biology, 77300 Fontainebleau, 5Unit\u00e9 de Recherche en G\u00e9nomique V\u00e9g\u00e9tale INRA-CNRS-Universit\u00e9 d\u2019Evry Val d\u2019Essonne, \u00c9vry 91057, France, 6INSERM U830, Paris F-75248, France, 7Aichi Cancer Center Research Institute, 1-1 Kanokoden, Chikusa-ku, Nagoya-city 464-8681, Japan and 8INRIA\u2013Sierra Project-Team, D\u00e9partement d\u2019Informatique de l\u2019\u00c9cole Normale Sup\u00e9rieure, Paris F-75013, France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I70768539","https://openalex.org/I4210161954","https://openalex.org/I80043","https://openalex.org/I88467170","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074876525","display_name":"Valentina Boeva","orcid":"https://orcid.org/0000-0002-4382-7185"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I4210161954","display_name":"D\u00e9partement d'Informatique","ror":"https://ror.org/05y6rqs46","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I2746051580","https://openalex.org/I29607241","https://openalex.org/I4210159245","https://openalex.org/I4210161954"]},{"id":"https://openalex.org/I70768539","display_name":"\u00c9cole Nationale Sup\u00e9rieure des Mines de Paris","ror":"https://ror.org/04y8cs423","country_code":"FR","type":"education","lineage":["https://openalex.org/I190752583","https://openalex.org/I2746051580","https://openalex.org/I70768539"]},{"id":"https://openalex.org/I80043","display_name":"Institut Curie","ror":"https://ror.org/04t0gwh46","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I80043"]},{"id":"https://openalex.org/I88467170","display_name":"Universit\u00e9 d'\u00c9vry Val-d'Essonne","ror":"https://ror.org/00e96v939","country_code":"FR","type":"education","lineage":["https://openalex.org/I277688954","https://openalex.org/I88467170"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Valentina Boeva","raw_affiliation_strings":["1 Department of Computer Science, Tokyo Institute of Technology, Tokyo 152-8552, Japan, 2Institut Curie, 26 rue d\u2019Ulm, 75248 Paris Cedex 05, 3INSERM U900, Paris F-75248, France, 4Mines ParisTech, Centre for Computational Biology, 77300 Fontainebleau, 5Unit\u00e9 de Recherche en G\u00e9nomique V\u00e9g\u00e9tale INRA-CNRS-Universit\u00e9 d\u2019Evry Val d\u2019Essonne, \u00c9vry 91057, France, 6INSERM U830, Paris F-75248, France, 7Aichi Cancer Center Research Institute, 1-1 Kanokoden, Chikusa-ku, Nagoya-city 464-8681, Japan and 8INRIA\u2013Sierra Project-Team, D\u00e9partement d\u2019Informatique de l\u2019\u00c9cole Normale Sup\u00e9rieure, Paris F-75013, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Computer Science, Tokyo Institute of Technology, Tokyo 152-8552, Japan, 2Institut Curie, 26 rue d\u2019Ulm, 75248 Paris Cedex 05, 3INSERM U900, Paris F-75248, France, 4Mines ParisTech, Centre for Computational Biology, 77300 Fontainebleau, 5Unit\u00e9 de Recherche en G\u00e9nomique V\u00e9g\u00e9tale INRA-CNRS-Universit\u00e9 d\u2019Evry Val d\u2019Essonne, \u00c9vry 91057, France, 6INSERM U830, Paris F-75248, France, 7Aichi Cancer Center Research Institute, 1-1 Kanokoden, Chikusa-ku, Nagoya-city 464-8681, Japan and 8INRIA\u2013Sierra Project-Team, D\u00e9partement d\u2019Informatique de l\u2019\u00c9cole Normale Sup\u00e9rieure, Paris F-75013, France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I70768539","https://openalex.org/I4210161954","https://openalex.org/I80043","https://openalex.org/I88467170","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103237769","display_name":"Guillem Rigaill","orcid":"https://orcid.org/0000-0002-7176-7511"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I4210088668","display_name":"Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement","ror":"https://ror.org/003vg9w96","country_code":"FR","type":"government","lineage":["https://openalex.org/I4210088668"]},{"id":"https://openalex.org/I4210161954","display_name":"D\u00e9partement d'Informatique","ror":"https://ror.org/05y6rqs46","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I2746051580","https://openalex.org/I29607241","https://openalex.org/I4210159245","https://openalex.org/I4210161954"]},{"id":"https://openalex.org/I70768539","display_name":"\u00c9cole Nationale Sup\u00e9rieure des Mines de Paris","ror":"https://ror.org/04y8cs423","country_code":"FR","type":"education","lineage":["https://openalex.org/I190752583","https://openalex.org/I2746051580","https://openalex.org/I70768539"]},{"id":"https://openalex.org/I80043","display_name":"Institut Curie","ror":"https://ror.org/04t0gwh46","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I80043"]},{"id":"https://openalex.org/I88467170","display_name":"Universit\u00e9 d'\u00c9vry Val-d'Essonne","ror":"https://ror.org/00e96v939","country_code":"FR","type":"education","lineage":["https://openalex.org/I277688954","https://openalex.org/I88467170"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Guillem Rigaill","raw_affiliation_strings":["1 Department of Computer Science, Tokyo Institute of Technology, Tokyo 152-8552, Japan, 2Institut Curie, 26 rue d\u2019Ulm, 75248 Paris Cedex 05, 3INSERM U900, Paris F-75248, France, 4Mines ParisTech, Centre for Computational Biology, 77300 Fontainebleau, 5Unit\u00e9 de Recherche en G\u00e9nomique V\u00e9g\u00e9tale INRA-CNRS-Universit\u00e9 d\u2019Evry Val d\u2019Essonne, \u00c9vry 91057, France, 6INSERM U830, Paris F-75248, France, 7Aichi Cancer Center Research Institute, 1-1 Kanokoden, Chikusa-ku, Nagoya-city 464-8681, Japan and 8INRIA\u2013Sierra Project-Team, D\u00e9partement d\u2019Informatique de l\u2019\u00c9cole Normale Sup\u00e9rieure, Paris F-75013, France","INRA - Institut National de la Recherche Agronomique (France)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Computer Science, Tokyo Institute of Technology, Tokyo 152-8552, Japan, 2Institut Curie, 26 rue d\u2019Ulm, 75248 Paris Cedex 05, 3INSERM U900, Paris F-75248, France, 4Mines ParisTech, Centre for Computational Biology, 77300 Fontainebleau, 5Unit\u00e9 de Recherche en G\u00e9nomique V\u00e9g\u00e9tale INRA-CNRS-Universit\u00e9 d\u2019Evry Val d\u2019Essonne, \u00c9vry 91057, France, 6INSERM U830, Paris F-75248, France, 7Aichi Cancer Center Research Institute, 1-1 Kanokoden, Chikusa-ku, Nagoya-city 464-8681, Japan and 8INRIA\u2013Sierra Project-Team, D\u00e9partement d\u2019Informatique de l\u2019\u00c9cole Normale Sup\u00e9rieure, Paris F-75013, France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I70768539","https://openalex.org/I4210161954","https://openalex.org/I80043","https://openalex.org/I88467170","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"INRA - Institut National de la Recherche Agronomique (France)","institution_ids":["https://openalex.org/I4210088668"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072347237","display_name":"Gudrun Schleiermacher","orcid":"https://orcid.org/0000-0002-0133-5879"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I4210161954","display_name":"D\u00e9partement d'Informatique","ror":"https://ror.org/05y6rqs46","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I2746051580","https://openalex.org/I29607241","https://openalex.org/I4210159245","https://openalex.org/I4210161954"]},{"id":"https://openalex.org/I70768539","display_name":"\u00c9cole Nationale Sup\u00e9rieure des Mines de Paris","ror":"https://ror.org/04y8cs423","country_code":"FR","type":"education","lineage":["https://openalex.org/I190752583","https://openalex.org/I2746051580","https://openalex.org/I70768539"]},{"id":"https://openalex.org/I80043","display_name":"Institut Curie","ror":"https://ror.org/04t0gwh46","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I80043"]},{"id":"https://openalex.org/I88467170","display_name":"Universit\u00e9 d'\u00c9vry Val-d'Essonne","ror":"https://ror.org/00e96v939","country_code":"FR","type":"education","lineage":["https://openalex.org/I277688954","https://openalex.org/I88467170"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Gudrun Schleiermacher","raw_affiliation_strings":["1 Department of Computer Science, Tokyo Institute of Technology, Tokyo 152-8552, Japan, 2Institut Curie, 26 rue d\u2019Ulm, 75248 Paris Cedex 05, 3INSERM U900, Paris F-75248, France, 4Mines ParisTech, Centre for Computational Biology, 77300 Fontainebleau, 5Unit\u00e9 de Recherche en G\u00e9nomique V\u00e9g\u00e9tale INRA-CNRS-Universit\u00e9 d\u2019Evry Val d\u2019Essonne, \u00c9vry 91057, France, 6INSERM U830, Paris F-75248, France, 7Aichi Cancer Center Research Institute, 1-1 Kanokoden, Chikusa-ku, Nagoya-city 464-8681, Japan and 8INRIA\u2013Sierra Project-Team, D\u00e9partement d\u2019Informatique de l\u2019\u00c9cole Normale Sup\u00e9rieure, Paris F-75013, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Computer Science, Tokyo Institute of Technology, Tokyo 152-8552, Japan, 2Institut Curie, 26 rue d\u2019Ulm, 75248 Paris Cedex 05, 3INSERM U900, Paris F-75248, France, 4Mines ParisTech, Centre for Computational Biology, 77300 Fontainebleau, 5Unit\u00e9 de Recherche en G\u00e9nomique V\u00e9g\u00e9tale INRA-CNRS-Universit\u00e9 d\u2019Evry Val d\u2019Essonne, \u00c9vry 91057, France, 6INSERM U830, Paris F-75248, France, 7Aichi Cancer Center Research Institute, 1-1 Kanokoden, Chikusa-ku, Nagoya-city 464-8681, Japan and 8INRIA\u2013Sierra Project-Team, D\u00e9partement d\u2019Informatique de l\u2019\u00c9cole Normale Sup\u00e9rieure, Paris F-75013, France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I70768539","https://openalex.org/I4210161954","https://openalex.org/I80043","https://openalex.org/I88467170","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058372540","display_name":"Isabelle Janoueix\u2010Lerosey","orcid":"https://orcid.org/0000-0003-0434-3003"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I4210161954","display_name":"D\u00e9partement d'Informatique","ror":"https://ror.org/05y6rqs46","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I2746051580","https://openalex.org/I29607241","https://openalex.org/I4210159245","https://openalex.org/I4210161954"]},{"id":"https://openalex.org/I70768539","display_name":"\u00c9cole Nationale Sup\u00e9rieure des Mines de Paris","ror":"https://ror.org/04y8cs423","country_code":"FR","type":"education","lineage":["https://openalex.org/I190752583","https://openalex.org/I2746051580","https://openalex.org/I70768539"]},{"id":"https://openalex.org/I80043","display_name":"Institut Curie","ror":"https://ror.org/04t0gwh46","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I80043"]},{"id":"https://openalex.org/I88467170","display_name":"Universit\u00e9 d'\u00c9vry Val-d'Essonne","ror":"https://ror.org/00e96v939","country_code":"FR","type":"education","lineage":["https://openalex.org/I277688954","https://openalex.org/I88467170"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Isabelle Janoueix-Lerosey","raw_affiliation_strings":["1 Department of Computer Science, Tokyo Institute of Technology, Tokyo 152-8552, Japan, 2Institut Curie, 26 rue d\u2019Ulm, 75248 Paris Cedex 05, 3INSERM U900, Paris F-75248, France, 4Mines ParisTech, Centre for Computational Biology, 77300 Fontainebleau, 5Unit\u00e9 de Recherche en G\u00e9nomique V\u00e9g\u00e9tale INRA-CNRS-Universit\u00e9 d\u2019Evry Val d\u2019Essonne, \u00c9vry 91057, France, 6INSERM U830, Paris F-75248, France, 7Aichi Cancer Center Research Institute, 1-1 Kanokoden, Chikusa-ku, Nagoya-city 464-8681, Japan and 8INRIA\u2013Sierra Project-Team, D\u00e9partement d\u2019Informatique de l\u2019\u00c9cole Normale Sup\u00e9rieure, Paris F-75013, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Computer Science, Tokyo Institute of Technology, Tokyo 152-8552, Japan, 2Institut Curie, 26 rue d\u2019Ulm, 75248 Paris Cedex 05, 3INSERM U900, Paris F-75248, France, 4Mines ParisTech, Centre for Computational Biology, 77300 Fontainebleau, 5Unit\u00e9 de Recherche en G\u00e9nomique V\u00e9g\u00e9tale INRA-CNRS-Universit\u00e9 d\u2019Evry Val d\u2019Essonne, \u00c9vry 91057, France, 6INSERM U830, Paris F-75248, France, 7Aichi Cancer Center Research Institute, 1-1 Kanokoden, Chikusa-ku, Nagoya-city 464-8681, Japan and 8INRIA\u2013Sierra Project-Team, D\u00e9partement d\u2019Informatique de l\u2019\u00c9cole Normale Sup\u00e9rieure, Paris F-75013, France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I70768539","https://openalex.org/I4210161954","https://openalex.org/I80043","https://openalex.org/I88467170","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029619328","display_name":"Olivier Delattre","orcid":"https://orcid.org/0000-0002-8730-2276"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I4210161954","display_name":"D\u00e9partement d'Informatique","ror":"https://ror.org/05y6rqs46","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I2746051580","https://openalex.org/I29607241","https://openalex.org/I4210159245","https://openalex.org/I4210161954"]},{"id":"https://openalex.org/I70768539","display_name":"\u00c9cole Nationale Sup\u00e9rieure des Mines de Paris","ror":"https://ror.org/04y8cs423","country_code":"FR","type":"education","lineage":["https://openalex.org/I190752583","https://openalex.org/I2746051580","https://openalex.org/I70768539"]},{"id":"https://openalex.org/I80043","display_name":"Institut Curie","ror":"https://ror.org/04t0gwh46","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I80043"]},{"id":"https://openalex.org/I88467170","display_name":"Universit\u00e9 d'\u00c9vry Val-d'Essonne","ror":"https://ror.org/00e96v939","country_code":"FR","type":"education","lineage":["https://openalex.org/I277688954","https://openalex.org/I88467170"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Olivier Delattre","raw_affiliation_strings":["1 Department of Computer Science, Tokyo Institute of Technology, Tokyo 152-8552, Japan, 2Institut Curie, 26 rue d\u2019Ulm, 75248 Paris Cedex 05, 3INSERM U900, Paris F-75248, France, 4Mines ParisTech, Centre for Computational Biology, 77300 Fontainebleau, 5Unit\u00e9 de Recherche en G\u00e9nomique V\u00e9g\u00e9tale INRA-CNRS-Universit\u00e9 d\u2019Evry Val d\u2019Essonne, \u00c9vry 91057, France, 6INSERM U830, Paris F-75248, France, 7Aichi Cancer Center Research Institute, 1-1 Kanokoden, Chikusa-ku, Nagoya-city 464-8681, Japan and 8INRIA\u2013Sierra Project-Team, D\u00e9partement d\u2019Informatique de l\u2019\u00c9cole Normale Sup\u00e9rieure, Paris F-75013, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Computer Science, Tokyo Institute of Technology, Tokyo 152-8552, Japan, 2Institut Curie, 26 rue d\u2019Ulm, 75248 Paris Cedex 05, 3INSERM U900, Paris F-75248, France, 4Mines ParisTech, Centre for Computational Biology, 77300 Fontainebleau, 5Unit\u00e9 de Recherche en G\u00e9nomique V\u00e9g\u00e9tale INRA-CNRS-Universit\u00e9 d\u2019Evry Val d\u2019Essonne, \u00c9vry 91057, France, 6INSERM U830, Paris F-75248, France, 7Aichi Cancer Center Research Institute, 1-1 Kanokoden, Chikusa-ku, Nagoya-city 464-8681, Japan and 8INRIA\u2013Sierra Project-Team, D\u00e9partement d\u2019Informatique de l\u2019\u00c9cole Normale Sup\u00e9rieure, Paris F-75013, France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I70768539","https://openalex.org/I4210161954","https://openalex.org/I80043","https://openalex.org/I88467170","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051502783","display_name":"Wilfrid Richer","orcid":"https://orcid.org/0000-0003-1802-3529"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I4210161954","display_name":"D\u00e9partement d'Informatique","ror":"https://ror.org/05y6rqs46","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I2746051580","https://openalex.org/I29607241","https://openalex.org/I4210159245","https://openalex.org/I4210161954"]},{"id":"https://openalex.org/I70768539","display_name":"\u00c9cole Nationale Sup\u00e9rieure des Mines de Paris","ror":"https://ror.org/04y8cs423","country_code":"FR","type":"education","lineage":["https://openalex.org/I190752583","https://openalex.org/I2746051580","https://openalex.org/I70768539"]},{"id":"https://openalex.org/I80043","display_name":"Institut Curie","ror":"https://ror.org/04t0gwh46","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I80043"]},{"id":"https://openalex.org/I88467170","display_name":"Universit\u00e9 d'\u00c9vry Val-d'Essonne","ror":"https://ror.org/00e96v939","country_code":"FR","type":"education","lineage":["https://openalex.org/I277688954","https://openalex.org/I88467170"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Wilfrid Richer","raw_affiliation_strings":["1 Department of Computer Science, Tokyo Institute of Technology, Tokyo 152-8552, Japan, 2Institut Curie, 26 rue d\u2019Ulm, 75248 Paris Cedex 05, 3INSERM U900, Paris F-75248, France, 4Mines ParisTech, Centre for Computational Biology, 77300 Fontainebleau, 5Unit\u00e9 de Recherche en G\u00e9nomique V\u00e9g\u00e9tale INRA-CNRS-Universit\u00e9 d\u2019Evry Val d\u2019Essonne, \u00c9vry 91057, France, 6INSERM U830, Paris F-75248, France, 7Aichi Cancer Center Research Institute, 1-1 Kanokoden, Chikusa-ku, Nagoya-city 464-8681, Japan and 8INRIA\u2013Sierra Project-Team, D\u00e9partement d\u2019Informatique de l\u2019\u00c9cole Normale Sup\u00e9rieure, Paris F-75013, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Computer Science, Tokyo Institute of Technology, Tokyo 152-8552, Japan, 2Institut Curie, 26 rue d\u2019Ulm, 75248 Paris Cedex 05, 3INSERM U900, Paris F-75248, France, 4Mines ParisTech, Centre for Computational Biology, 77300 Fontainebleau, 5Unit\u00e9 de Recherche en G\u00e9nomique V\u00e9g\u00e9tale INRA-CNRS-Universit\u00e9 d\u2019Evry Val d\u2019Essonne, \u00c9vry 91057, France, 6INSERM U830, Paris F-75248, France, 7Aichi Cancer Center Research Institute, 1-1 Kanokoden, Chikusa-ku, Nagoya-city 464-8681, Japan and 8INRIA\u2013Sierra Project-Team, D\u00e9partement d\u2019Informatique de l\u2019\u00c9cole Normale Sup\u00e9rieure, Paris F-75013, France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I70768539","https://openalex.org/I4210161954","https://openalex.org/I80043","https://openalex.org/I88467170","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003479459","display_name":"Franck Bourdeaut","orcid":"https://orcid.org/0000-0001-9489-6781"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I4210161954","display_name":"D\u00e9partement d'Informatique","ror":"https://ror.org/05y6rqs46","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I2746051580","https://openalex.org/I29607241","https://openalex.org/I4210159245","https://openalex.org/I4210161954"]},{"id":"https://openalex.org/I70768539","display_name":"\u00c9cole Nationale Sup\u00e9rieure des Mines de Paris","ror":"https://ror.org/04y8cs423","country_code":"FR","type":"education","lineage":["https://openalex.org/I190752583","https://openalex.org/I2746051580","https://openalex.org/I70768539"]},{"id":"https://openalex.org/I80043","display_name":"Institut Curie","ror":"https://ror.org/04t0gwh46","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I80043"]},{"id":"https://openalex.org/I88467170","display_name":"Universit\u00e9 d'\u00c9vry Val-d'Essonne","ror":"https://ror.org/00e96v939","country_code":"FR","type":"education","lineage":["https://openalex.org/I277688954","https://openalex.org/I88467170"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Franck Bourdeaut","raw_affiliation_strings":["1 Department of Computer Science, Tokyo Institute of Technology, Tokyo 152-8552, Japan, 2Institut Curie, 26 rue d\u2019Ulm, 75248 Paris Cedex 05, 3INSERM U900, Paris F-75248, France, 4Mines ParisTech, Centre for Computational Biology, 77300 Fontainebleau, 5Unit\u00e9 de Recherche en G\u00e9nomique V\u00e9g\u00e9tale INRA-CNRS-Universit\u00e9 d\u2019Evry Val d\u2019Essonne, \u00c9vry 91057, France, 6INSERM U830, Paris F-75248, France, 7Aichi Cancer Center Research Institute, 1-1 Kanokoden, Chikusa-ku, Nagoya-city 464-8681, Japan and 8INRIA\u2013Sierra Project-Team, D\u00e9partement d\u2019Informatique de l\u2019\u00c9cole Normale Sup\u00e9rieure, Paris F-75013, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Computer Science, Tokyo Institute of Technology, Tokyo 152-8552, Japan, 2Institut Curie, 26 rue d\u2019Ulm, 75248 Paris Cedex 05, 3INSERM U900, Paris F-75248, France, 4Mines ParisTech, Centre for Computational Biology, 77300 Fontainebleau, 5Unit\u00e9 de Recherche en G\u00e9nomique V\u00e9g\u00e9tale INRA-CNRS-Universit\u00e9 d\u2019Evry Val d\u2019Essonne, \u00c9vry 91057, France, 6INSERM U830, Paris F-75248, France, 7Aichi Cancer Center Research Institute, 1-1 Kanokoden, Chikusa-ku, Nagoya-city 464-8681, Japan and 8INRIA\u2013Sierra Project-Team, D\u00e9partement d\u2019Informatique de l\u2019\u00c9cole Normale Sup\u00e9rieure, Paris F-75013, France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I70768539","https://openalex.org/I4210161954","https://openalex.org/I80043","https://openalex.org/I88467170","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004826185","display_name":"Miyuki Suguro","orcid":null},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I4210161954","display_name":"D\u00e9partement d'Informatique","ror":"https://ror.org/05y6rqs46","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I2746051580","https://openalex.org/I29607241","https://openalex.org/I4210159245","https://openalex.org/I4210161954"]},{"id":"https://openalex.org/I70768539","display_name":"\u00c9cole Nationale Sup\u00e9rieure des Mines de Paris","ror":"https://ror.org/04y8cs423","country_code":"FR","type":"education","lineage":["https://openalex.org/I190752583","https://openalex.org/I2746051580","https://openalex.org/I70768539"]},{"id":"https://openalex.org/I80043","display_name":"Institut Curie","ror":"https://ror.org/04t0gwh46","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I80043"]},{"id":"https://openalex.org/I88467170","display_name":"Universit\u00e9 d'\u00c9vry Val-d'Essonne","ror":"https://ror.org/00e96v939","country_code":"FR","type":"education","lineage":["https://openalex.org/I277688954","https://openalex.org/I88467170"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Miyuki Suguro","raw_affiliation_strings":["1 Department of Computer Science, Tokyo Institute of Technology, Tokyo 152-8552, Japan, 2Institut Curie, 26 rue d\u2019Ulm, 75248 Paris Cedex 05, 3INSERM U900, Paris F-75248, France, 4Mines ParisTech, Centre for Computational Biology, 77300 Fontainebleau, 5Unit\u00e9 de Recherche en G\u00e9nomique V\u00e9g\u00e9tale INRA-CNRS-Universit\u00e9 d\u2019Evry Val d\u2019Essonne, \u00c9vry 91057, France, 6INSERM U830, Paris F-75248, France, 7Aichi Cancer Center Research Institute, 1-1 Kanokoden, Chikusa-ku, Nagoya-city 464-8681, Japan and 8INRIA\u2013Sierra Project-Team, D\u00e9partement d\u2019Informatique de l\u2019\u00c9cole Normale Sup\u00e9rieure, Paris F-75013, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Computer Science, Tokyo Institute of Technology, Tokyo 152-8552, Japan, 2Institut Curie, 26 rue d\u2019Ulm, 75248 Paris Cedex 05, 3INSERM U900, Paris F-75248, France, 4Mines ParisTech, Centre for Computational Biology, 77300 Fontainebleau, 5Unit\u00e9 de Recherche en G\u00e9nomique V\u00e9g\u00e9tale INRA-CNRS-Universit\u00e9 d\u2019Evry Val d\u2019Essonne, \u00c9vry 91057, France, 6INSERM U830, Paris F-75248, France, 7Aichi Cancer Center Research Institute, 1-1 Kanokoden, Chikusa-ku, Nagoya-city 464-8681, Japan and 8INRIA\u2013Sierra Project-Team, D\u00e9partement d\u2019Informatique de l\u2019\u00c9cole Normale Sup\u00e9rieure, Paris F-75013, France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I70768539","https://openalex.org/I4210161954","https://openalex.org/I80043","https://openalex.org/I88467170","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111981181","display_name":"Masao Seto","orcid":null},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I4210161954","display_name":"D\u00e9partement d'Informatique","ror":"https://ror.org/05y6rqs46","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I2746051580","https://openalex.org/I29607241","https://openalex.org/I4210159245","https://openalex.org/I4210161954"]},{"id":"https://openalex.org/I70768539","display_name":"\u00c9cole Nationale Sup\u00e9rieure des Mines de Paris","ror":"https://ror.org/04y8cs423","country_code":"FR","type":"education","lineage":["https://openalex.org/I190752583","https://openalex.org/I2746051580","https://openalex.org/I70768539"]},{"id":"https://openalex.org/I80043","display_name":"Institut Curie","ror":"https://ror.org/04t0gwh46","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I80043"]},{"id":"https://openalex.org/I88467170","display_name":"Universit\u00e9 d'\u00c9vry Val-d'Essonne","ror":"https://ror.org/00e96v939","country_code":"FR","type":"education","lineage":["https://openalex.org/I277688954","https://openalex.org/I88467170"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Masao Seto","raw_affiliation_strings":["1 Department of Computer Science, Tokyo Institute of Technology, Tokyo 152-8552, Japan, 2Institut Curie, 26 rue d\u2019Ulm, 75248 Paris Cedex 05, 3INSERM U900, Paris F-75248, France, 4Mines ParisTech, Centre for Computational Biology, 77300 Fontainebleau, 5Unit\u00e9 de Recherche en G\u00e9nomique V\u00e9g\u00e9tale INRA-CNRS-Universit\u00e9 d\u2019Evry Val d\u2019Essonne, \u00c9vry 91057, France, 6INSERM U830, Paris F-75248, France, 7Aichi Cancer Center Research Institute, 1-1 Kanokoden, Chikusa-ku, Nagoya-city 464-8681, Japan and 8INRIA\u2013Sierra Project-Team, D\u00e9partement d\u2019Informatique de l\u2019\u00c9cole Normale Sup\u00e9rieure, Paris F-75013, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Computer Science, Tokyo Institute of Technology, Tokyo 152-8552, Japan, 2Institut Curie, 26 rue d\u2019Ulm, 75248 Paris Cedex 05, 3INSERM U900, Paris F-75248, France, 4Mines ParisTech, Centre for Computational Biology, 77300 Fontainebleau, 5Unit\u00e9 de Recherche en G\u00e9nomique V\u00e9g\u00e9tale INRA-CNRS-Universit\u00e9 d\u2019Evry Val d\u2019Essonne, \u00c9vry 91057, France, 6INSERM U830, Paris F-75248, France, 7Aichi Cancer Center Research Institute, 1-1 Kanokoden, Chikusa-ku, Nagoya-city 464-8681, Japan and 8INRIA\u2013Sierra Project-Team, D\u00e9partement d\u2019Informatique de l\u2019\u00c9cole Normale Sup\u00e9rieure, Paris F-75013, France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I70768539","https://openalex.org/I4210161954","https://openalex.org/I80043","https://openalex.org/I88467170","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5107863416","display_name":"Francis Bach","orcid":null},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I4210161954","display_name":"D\u00e9partement d'Informatique","ror":"https://ror.org/05y6rqs46","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I2746051580","https://openalex.org/I29607241","https://openalex.org/I4210159245","https://openalex.org/I4210161954"]},{"id":"https://openalex.org/I70768539","display_name":"\u00c9cole Nationale Sup\u00e9rieure des Mines de Paris","ror":"https://ror.org/04y8cs423","country_code":"FR","type":"education","lineage":["https://openalex.org/I190752583","https://openalex.org/I2746051580","https://openalex.org/I70768539"]},{"id":"https://openalex.org/I80043","display_name":"Institut Curie","ror":"https://ror.org/04t0gwh46","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I80043"]},{"id":"https://openalex.org/I88467170","display_name":"Universit\u00e9 d'\u00c9vry Val-d'Essonne","ror":"https://ror.org/00e96v939","country_code":"FR","type":"education","lineage":["https://openalex.org/I277688954","https://openalex.org/I88467170"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Francis Bach","raw_affiliation_strings":["1 Department of Computer Science, Tokyo Institute of Technology, Tokyo 152-8552, Japan, 2Institut Curie, 26 rue d\u2019Ulm, 75248 Paris Cedex 05, 3INSERM U900, Paris F-75248, France, 4Mines ParisTech, Centre for Computational Biology, 77300 Fontainebleau, 5Unit\u00e9 de Recherche en G\u00e9nomique V\u00e9g\u00e9tale INRA-CNRS-Universit\u00e9 d\u2019Evry Val d\u2019Essonne, \u00c9vry 91057, France, 6INSERM U830, Paris F-75248, France, 7Aichi Cancer Center Research Institute, 1-1 Kanokoden, Chikusa-ku, Nagoya-city 464-8681, Japan and 8INRIA\u2013Sierra Project-Team, D\u00e9partement d\u2019Informatique de l\u2019\u00c9cole Normale Sup\u00e9rieure, Paris F-75013, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Computer Science, Tokyo Institute of Technology, Tokyo 152-8552, Japan, 2Institut Curie, 26 rue d\u2019Ulm, 75248 Paris Cedex 05, 3INSERM U900, Paris F-75248, France, 4Mines ParisTech, Centre for Computational Biology, 77300 Fontainebleau, 5Unit\u00e9 de Recherche en G\u00e9nomique V\u00e9g\u00e9tale INRA-CNRS-Universit\u00e9 d\u2019Evry Val d\u2019Essonne, \u00c9vry 91057, France, 6INSERM U830, Paris F-75248, France, 7Aichi Cancer Center Research Institute, 1-1 Kanokoden, Chikusa-ku, Nagoya-city 464-8681, Japan and 8INRIA\u2013Sierra Project-Team, D\u00e9partement d\u2019Informatique de l\u2019\u00c9cole Normale Sup\u00e9rieure, Paris F-75013, France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I70768539","https://openalex.org/I4210161954","https://openalex.org/I80043","https://openalex.org/I88467170","https://openalex.org/I1294671590"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5064770739","display_name":"Jean\u2010Philippe Vert","orcid":"https://orcid.org/0000-0001-9510-8441"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I4210161954","display_name":"D\u00e9partement d'Informatique","ror":"https://ror.org/05y6rqs46","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I2746051580","https://openalex.org/I29607241","https://openalex.org/I4210159245","https://openalex.org/I4210161954"]},{"id":"https://openalex.org/I70768539","display_name":"\u00c9cole Nationale Sup\u00e9rieure des Mines de Paris","ror":"https://ror.org/04y8cs423","country_code":"FR","type":"education","lineage":["https://openalex.org/I190752583","https://openalex.org/I2746051580","https://openalex.org/I70768539"]},{"id":"https://openalex.org/I80043","display_name":"Institut Curie","ror":"https://ror.org/04t0gwh46","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I80043"]},{"id":"https://openalex.org/I88467170","display_name":"Universit\u00e9 d'\u00c9vry Val-d'Essonne","ror":"https://ror.org/00e96v939","country_code":"FR","type":"education","lineage":["https://openalex.org/I277688954","https://openalex.org/I88467170"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Jean-Philippe Vert","raw_affiliation_strings":["1 Department of Computer Science, Tokyo Institute of Technology, Tokyo 152-8552, Japan, 2Institut Curie, 26 rue d\u2019Ulm, 75248 Paris Cedex 05, 3INSERM U900, Paris F-75248, France, 4Mines ParisTech, Centre for Computational Biology, 77300 Fontainebleau, 5Unit\u00e9 de Recherche en G\u00e9nomique V\u00e9g\u00e9tale INRA-CNRS-Universit\u00e9 d\u2019Evry Val d\u2019Essonne, \u00c9vry 91057, France, 6INSERM U830, Paris F-75248, France, 7Aichi Cancer Center Research Institute, 1-1 Kanokoden, Chikusa-ku, Nagoya-city 464-8681, Japan and 8INRIA\u2013Sierra Project-Team, D\u00e9partement d\u2019Informatique de l\u2019\u00c9cole Normale Sup\u00e9rieure, Paris F-75013, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Computer Science, Tokyo Institute of Technology, Tokyo 152-8552, Japan, 2Institut Curie, 26 rue d\u2019Ulm, 75248 Paris Cedex 05, 3INSERM U900, Paris F-75248, France, 4Mines ParisTech, Centre for Computational Biology, 77300 Fontainebleau, 5Unit\u00e9 de Recherche en G\u00e9nomique V\u00e9g\u00e9tale INRA-CNRS-Universit\u00e9 d\u2019Evry Val d\u2019Essonne, \u00c9vry 91057, France, 6INSERM U830, Paris F-75248, France, 7Aichi Cancer Center Research Institute, 1-1 Kanokoden, Chikusa-ku, Nagoya-city 464-8681, Japan and 8INRIA\u2013Sierra Project-Team, D\u00e9partement d\u2019Informatique de l\u2019\u00c9cole Normale Sup\u00e9rieure, Paris F-75013, France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I70768539","https://openalex.org/I4210161954","https://openalex.org/I80043","https://openalex.org/I88467170","https://openalex.org/I1294671590"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":12,"corresponding_author_ids":["https://openalex.org/A5035679840"],"corresponding_institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I154526488","https://openalex.org/I4210161954","https://openalex.org/I70768539","https://openalex.org/I80043","https://openalex.org/I88467170"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":2.3271,"has_fulltext":false,"cited_by_count":17,"citation_normalized_percentile":{"value":0.89095,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"30","issue":"11","first_page":"1539","last_page":"1546"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11213","display_name":"Genomic variations and chromosomal abnormalities","score":0.7646999955177307,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11213","display_name":"Genomic variations and chromosomal abnormalities","score":0.7646999955177307,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.04230000078678131,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.03880000114440918,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6845954060554504},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.6503559947013855},{"id":"https://openalex.org/keywords/source-code","display_name":"Source code","score":0.5921111702919006},{"id":"https://openalex.org/keywords/genome-browser","display_name":"Genome browser","score":0.5553669333457947},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.5076955556869507},{"id":"https://openalex.org/keywords/web-application","display_name":"Web application","score":0.4615497589111328},{"id":"https://openalex.org/keywords/code","display_name":"Code (set theory)","score":0.45668306946754456},{"id":"https://openalex.org/keywords/chromosome","display_name":"Chromosome","score":0.42477336525917053},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.39604946970939636},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3352035880088806},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.31815528869628906},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2910204231739044},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.27091115713119507},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.20240193605422974},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.15586432814598083},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.0839335024356842},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.06871688365936279}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6845954060554504},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.6503559947013855},{"id":"https://openalex.org/C43126263","wikidata":"https://www.wikidata.org/wiki/Q128751","display_name":"Source code","level":2,"score":0.5921111702919006},{"id":"https://openalex.org/C2781148417","wikidata":"https://www.wikidata.org/wiki/Q5533486","display_name":"Genome browser","level":5,"score":0.5553669333457947},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5076955556869507},{"id":"https://openalex.org/C118643609","wikidata":"https://www.wikidata.org/wiki/Q189210","display_name":"Web application","level":2,"score":0.4615497589111328},{"id":"https://openalex.org/C2776760102","wikidata":"https://www.wikidata.org/wiki/Q5139990","display_name":"Code (set theory)","level":3,"score":0.45668306946754456},{"id":"https://openalex.org/C30481170","wikidata":"https://www.wikidata.org/wiki/Q37748","display_name":"Chromosome","level":3,"score":0.42477336525917053},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.39604946970939636},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3352035880088806},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.31815528869628906},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2910204231739044},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.27091115713119507},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.20240193605422974},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.15586432814598083},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0839335024356842},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.06871688365936279}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D056905","descriptor_name":"Chromosome Breakpoints","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056905","descriptor_name":"Chromosome Breakpoints","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056905","descriptor_name":"Chromosome Breakpoints","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056905","descriptor_name":"Chromosome Breakpoints","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056915","descriptor_name":"DNA Copy Number Variations","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D056915","descriptor_name":"DNA Copy Number Variations","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D056915","descriptor_name":"DNA Copy Number Variations","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D056915","descriptor_name":"DNA Copy Number Variations","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1093/bioinformatics/btu072","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btu072","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/30/11/1539/48928420/bioinformatics_30_11_1539.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:24493034","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24493034","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:HAL:hal-01101868v1","is_oa":false,"landing_page_url":"https://minesparis-psl.hal.science/hal-01101868","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics, 2014, 30 (11), pp.1539-1546. ⟨10.1093/bioinformatics/btu072⟩","raw_type":"Journal articles"},{"id":"pmh:oai:europepmc.org:3004102","is_oa":true,"landing_page_url":"http://europepmc.org/articles/PMC4029035","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:4029035","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4029035","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btu072","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btu072","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/30/11/1539/48928420/bioinformatics_30_11_1539.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Partnerships for the goals","id":"https://metadata.un.org/sdg/17","score":0.49000000953674316}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W2132293925.pdf"},"referenced_works_count":29,"referenced_works":["https://openalex.org/W44337756","https://openalex.org/W116021062","https://openalex.org/W1501909305","https://openalex.org/W2057217795","https://openalex.org/W2091781764","https://openalex.org/W2109788084","https://openalex.org/W2119934409","https://openalex.org/W2121743948","https://openalex.org/W2124435172","https://openalex.org/W2128016314","https://openalex.org/W2129016996","https://openalex.org/W2133360710","https://openalex.org/W2134672574","https://openalex.org/W2135415614","https://openalex.org/W2140494954","https://openalex.org/W2140888103","https://openalex.org/W2148879747","https://openalex.org/W2160566798","https://openalex.org/W2163022769","https://openalex.org/W2168871277","https://openalex.org/W2171777347","https://openalex.org/W2530014580","https://openalex.org/W2550599154","https://openalex.org/W2885727518","https://openalex.org/W4210347168","https://openalex.org/W4245662196","https://openalex.org/W6601816629","https://openalex.org/W6684983487","https://openalex.org/W6729584005"],"related_works":["https://openalex.org/W2168783124","https://openalex.org/W2126958666","https://openalex.org/W4230394123","https://openalex.org/W4229794866","https://openalex.org/W2916427899","https://openalex.org/W2127640118","https://openalex.org/W2950949680","https://openalex.org/W2986925253","https://openalex.org/W2176686025","https://openalex.org/W2132522861"],"abstract_inverted_index":{"MOTIVATION:":[0],"DNA":[1],"copy":[2,103],"number":[3,104],"profiles":[4,62],"characterize":[5],"regions":[6],"of":[7,79,95],"chromosome":[8],"gains,":[9],"losses":[10],"and":[11,40,63,82,89,91,129],"breakpoints":[12,113],"in":[13],"tumor":[14],"genomes.":[15],"Although":[16],"many":[17],"models":[18,41],"have":[19],"been":[20],"proposed":[21],"to":[22,101],"detect":[23],"these":[24],"alterations,":[25],"it":[26],"is":[27,32,134],"not":[28],"clear":[29],"which":[30],"model":[31,78],"appropriate":[33],"before":[34],"visual":[35],"inspection":[36],"the":[37,61,71,80,93,119],"signal,":[38],"noise":[39],"for":[42,55],"a":[43,50,76,130],"particular":[44],"profile.":[45],"RESULTS:":[46],"We":[47],"propose":[48],"SegAnnDB,":[49],"Web-based":[51],"computer":[52],"vision":[53],"system":[54],"genomic":[56],"segmentation:":[57],"first,":[58],"visually":[59],"inspect":[60],"manually":[64],"annotate":[65],"altered":[66],"regions,":[67],"then":[68],"SegAnnDB":[69,84],"determines":[70],"precise":[72],"alteration":[73],"locations":[74],"using":[75],"mathematical":[77],"data":[81],"annotations.":[83],"facilitates":[85],"collaboration":[86],"between":[87],"biologists":[88],"bioinformaticians,":[90],"uses":[92],"University":[94],"California,":[96],"Santa":[97],"Cruz":[98],"genome":[99],"browser":[100],"visualize":[102],"alterations":[105],"alongside":[106],"known":[107],"genes.":[108],"AVAILABILITY":[109],"AND":[110],"IMPLEMENTATION:":[111],"The":[112],"project":[114],"on":[115],"INRIA":[116],"GForge":[117],"hosts":[118],"source":[120],"code,":[121],"an":[122],"Amazon":[123],"Machine":[124],"Image":[125],"can":[126],"be":[127],"launched":[128],"demonstration":[131],"Web":[132],"site":[133],"http://bioviz.rocq.inria.fr.":[135]},"counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":5},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":3}],"updated_date":"2026-06-23T06:36:01.041984","created_date":"2025-10-10T00:00:00"}