{"id":"https://openalex.org/W2119109208","doi":"https://doi.org/10.1093/bioinformatics/btu037","title":"MEMBPLUGIN: studying membrane complexity in VMD","display_name":"MEMBPLUGIN: studying membrane complexity in VMD","publication_year":2014,"publication_date":"2014-01-21","ids":{"openalex":"https://openalex.org/W2119109208","doi":"https://doi.org/10.1093/bioinformatics/btu037","mag":"2119109208","pmid":"https://pubmed.ncbi.nlm.nih.gov/24451625"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btu037","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btu037","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/30/10/1478/49859797/bioinformatics_30_10_1478.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/30/10/1478/49859797/bioinformatics_30_10_1478.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5003500154","display_name":"Ram\u00f3n Guix\u00e0-Gonz\u00e1lez","orcid":"https://orcid.org/0000-0003-0397-9800"},"institutions":[{"id":"https://openalex.org/I166825849","display_name":"Tampere University","ror":"https://ror.org/033003e23","country_code":"FI","type":"education","lineage":["https://openalex.org/I166825849"]},{"id":"https://openalex.org/I4210133110","display_name":"Tampere University","ror":null,"country_code":"FI","type":null,"lineage":["https://openalex.org/I4210133110"]},{"id":"https://openalex.org/I170486558","display_name":"Pompeu Fabra University","ror":"https://ror.org/04n0g0b29","country_code":"ES","type":"education","lineage":["https://openalex.org/I170486558"]},{"id":"https://openalex.org/I4210155236","display_name":"National Research Council","ror":"https://ror.org/04zaypm56","country_code":"IT","type":"funder","lineage":["https://openalex.org/I4210155236"]}],"countries":["ES","FI","IT"],"is_corresponding":true,"raw_author_name":"Ramon Guix\u00e0-Gonz\u00e1lez","raw_affiliation_strings":["1 Pharmacoinformatics group, Research Programme on Biomedical Informatics (GRIB), Universitat Pompeu Fabra (UPF)-Hospital del Mar Medical Research Institute (IMIM), Barcelona, Spain, 2Department of Physics, Tampere University of Technology, Tampere, Finland and 3Institute of Biomedical Engineering, National Research Council of Italy (ISIB-CNR), Padua, Italy"],"affiliations":[{"raw_affiliation_string":"1 Pharmacoinformatics group, Research Programme on Biomedical Informatics (GRIB), Universitat Pompeu Fabra (UPF)-Hospital del Mar Medical Research Institute (IMIM), Barcelona, Spain, 2Department of Physics, Tampere University of Technology, Tampere, Finland and 3Institute of Biomedical Engineering, National Research Council of Italy (ISIB-CNR), Padua, Italy","institution_ids":["https://openalex.org/I166825849","https://openalex.org/I4210155236","https://openalex.org/I4210133110","https://openalex.org/I170486558"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079194779","display_name":"Ismael Rodr\u00edguez\u2010Espigares","orcid":"https://orcid.org/0000-0002-1602-8679"},"institutions":[{"id":"https://openalex.org/I166825849","display_name":"Tampere University","ror":"https://ror.org/033003e23","country_code":"FI","type":"education","lineage":["https://openalex.org/I166825849"]},{"id":"https://openalex.org/I4210133110","display_name":"Tampere University","ror":null,"country_code":"FI","type":null,"lineage":["https://openalex.org/I4210133110"]},{"id":"https://openalex.org/I170486558","display_name":"Pompeu Fabra University","ror":"https://ror.org/04n0g0b29","country_code":"ES","type":"education","lineage":["https://openalex.org/I170486558"]},{"id":"https://openalex.org/I4210155236","display_name":"National Research Council","ror":"https://ror.org/04zaypm56","country_code":"IT","type":"funder","lineage":["https://openalex.org/I4210155236"]}],"countries":["ES","FI","IT"],"is_corresponding":false,"raw_author_name":"Ismael Rodriguez-Espigares","raw_affiliation_strings":["1 Pharmacoinformatics group, Research Programme on Biomedical Informatics (GRIB), Universitat Pompeu Fabra (UPF)-Hospital del Mar Medical Research Institute (IMIM), Barcelona, Spain, 2Department of Physics, Tampere University of Technology, Tampere, Finland and 3Institute of Biomedical Engineering, National Research Council of Italy (ISIB-CNR), Padua, Italy"],"affiliations":[{"raw_affiliation_string":"1 Pharmacoinformatics group, Research Programme on Biomedical Informatics (GRIB), Universitat Pompeu Fabra (UPF)-Hospital del Mar Medical Research Institute (IMIM), Barcelona, Spain, 2Department of Physics, Tampere University of Technology, Tampere, Finland and 3Institute of Biomedical Engineering, National Research Council of Italy (ISIB-CNR), Padua, Italy","institution_ids":["https://openalex.org/I166825849","https://openalex.org/I4210155236","https://openalex.org/I4210133110","https://openalex.org/I170486558"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054352727","display_name":"Juan Manuel Ram\u00edrez\u2010Anguita","orcid":"https://orcid.org/0000-0002-8509-0927"},"institutions":[{"id":"https://openalex.org/I4210155236","display_name":"National Research Council","ror":"https://ror.org/04zaypm56","country_code":"IT","type":"funder","lineage":["https://openalex.org/I4210155236"]},{"id":"https://openalex.org/I170486558","display_name":"Pompeu Fabra University","ror":"https://ror.org/04n0g0b29","country_code":"ES","type":"education","lineage":["https://openalex.org/I170486558"]},{"id":"https://openalex.org/I166825849","display_name":"Tampere University","ror":"https://ror.org/033003e23","country_code":"FI","type":"education","lineage":["https://openalex.org/I166825849"]},{"id":"https://openalex.org/I4210133110","display_name":"Tampere University","ror":null,"country_code":"FI","type":null,"lineage":["https://openalex.org/I4210133110"]}],"countries":["ES","FI","IT"],"is_corresponding":false,"raw_author_name":"Juan Manuel Ram\u00edrez-Anguita","raw_affiliation_strings":["1 Pharmacoinformatics group, Research Programme on Biomedical Informatics (GRIB), Universitat Pompeu Fabra (UPF)-Hospital del Mar Medical Research Institute (IMIM), Barcelona, Spain, 2Department of Physics, Tampere University of Technology, Tampere, Finland and 3Institute of Biomedical Engineering, National Research Council of Italy (ISIB-CNR), Padua, Italy"],"affiliations":[{"raw_affiliation_string":"1 Pharmacoinformatics group, Research Programme on Biomedical Informatics (GRIB), Universitat Pompeu Fabra (UPF)-Hospital del Mar Medical Research Institute (IMIM), Barcelona, Spain, 2Department of Physics, Tampere University of Technology, Tampere, Finland and 3Institute of Biomedical Engineering, National Research Council of Italy (ISIB-CNR), Padua, Italy","institution_ids":["https://openalex.org/I166825849","https://openalex.org/I4210155236","https://openalex.org/I4210133110","https://openalex.org/I170486558"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032041509","display_name":"Pau Carri\u00f3-Gaspar","orcid":null},"institutions":[{"id":"https://openalex.org/I4210155236","display_name":"National Research Council","ror":"https://ror.org/04zaypm56","country_code":"IT","type":"funder","lineage":["https://openalex.org/I4210155236"]},{"id":"https://openalex.org/I170486558","display_name":"Pompeu Fabra University","ror":"https://ror.org/04n0g0b29","country_code":"ES","type":"education","lineage":["https://openalex.org/I170486558"]},{"id":"https://openalex.org/I4210133110","display_name":"Tampere University","ror":null,"country_code":"FI","type":null,"lineage":["https://openalex.org/I4210133110"]},{"id":"https://openalex.org/I166825849","display_name":"Tampere University","ror":"https://ror.org/033003e23","country_code":"FI","type":"education","lineage":["https://openalex.org/I166825849"]}],"countries":["ES","FI","IT"],"is_corresponding":false,"raw_author_name":"Pau Carri\u00f3-Gaspar","raw_affiliation_strings":["1 Pharmacoinformatics group, Research Programme on Biomedical Informatics (GRIB), Universitat Pompeu Fabra (UPF)-Hospital del Mar Medical Research Institute (IMIM), Barcelona, Spain, 2Department of Physics, Tampere University of Technology, Tampere, Finland and 3Institute of Biomedical Engineering, National Research Council of Italy (ISIB-CNR), Padua, Italy"],"affiliations":[{"raw_affiliation_string":"1 Pharmacoinformatics group, Research Programme on Biomedical Informatics (GRIB), Universitat Pompeu Fabra (UPF)-Hospital del Mar Medical Research Institute (IMIM), Barcelona, Spain, 2Department of Physics, Tampere University of Technology, Tampere, Finland and 3Institute of Biomedical Engineering, National Research Council of Italy (ISIB-CNR), Padua, Italy","institution_ids":["https://openalex.org/I166825849","https://openalex.org/I4210155236","https://openalex.org/I4210133110","https://openalex.org/I170486558"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075124865","display_name":"Hector Martinez\u2010Seara","orcid":"https://orcid.org/0000-0001-9716-1713"},"institutions":[{"id":"https://openalex.org/I4210133110","display_name":"Tampere University","ror":null,"country_code":"FI","type":null,"lineage":["https://openalex.org/I4210133110"]},{"id":"https://openalex.org/I4210155236","display_name":"National Research Council","ror":"https://ror.org/04zaypm56","country_code":"IT","type":"funder","lineage":["https://openalex.org/I4210155236"]},{"id":"https://openalex.org/I166825849","display_name":"Tampere University","ror":"https://ror.org/033003e23","country_code":"FI","type":"education","lineage":["https://openalex.org/I166825849"]},{"id":"https://openalex.org/I170486558","display_name":"Pompeu Fabra University","ror":"https://ror.org/04n0g0b29","country_code":"ES","type":"education","lineage":["https://openalex.org/I170486558"]}],"countries":["ES","FI","IT"],"is_corresponding":false,"raw_author_name":"Hector Martinez-Seara","raw_affiliation_strings":["1 Pharmacoinformatics group, Research Programme on Biomedical Informatics (GRIB), Universitat Pompeu Fabra (UPF)-Hospital del Mar Medical Research Institute (IMIM), Barcelona, Spain, 2Department of Physics, Tampere University of Technology, Tampere, Finland and 3Institute of Biomedical Engineering, National Research Council of Italy (ISIB-CNR), Padua, Italy"],"affiliations":[{"raw_affiliation_string":"1 Pharmacoinformatics group, Research Programme on Biomedical Informatics (GRIB), Universitat Pompeu Fabra (UPF)-Hospital del Mar Medical Research Institute (IMIM), Barcelona, Spain, 2Department of Physics, Tampere University of Technology, Tampere, Finland and 3Institute of Biomedical Engineering, National Research Council of Italy (ISIB-CNR), Padua, Italy","institution_ids":["https://openalex.org/I166825849","https://openalex.org/I4210155236","https://openalex.org/I4210133110","https://openalex.org/I170486558"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052899068","display_name":"Toni Giorgino","orcid":"https://orcid.org/0000-0001-6449-0596"},"institutions":[{"id":"https://openalex.org/I4210133110","display_name":"Tampere University","ror":null,"country_code":"FI","type":null,"lineage":["https://openalex.org/I4210133110"]},{"id":"https://openalex.org/I166825849","display_name":"Tampere University","ror":"https://ror.org/033003e23","country_code":"FI","type":"education","lineage":["https://openalex.org/I166825849"]},{"id":"https://openalex.org/I170486558","display_name":"Pompeu Fabra University","ror":"https://ror.org/04n0g0b29","country_code":"ES","type":"education","lineage":["https://openalex.org/I170486558"]},{"id":"https://openalex.org/I4210155236","display_name":"National Research Council","ror":"https://ror.org/04zaypm56","country_code":"IT","type":"funder","lineage":["https://openalex.org/I4210155236"]}],"countries":["ES","FI","IT"],"is_corresponding":false,"raw_author_name":"Toni Giorgino","raw_affiliation_strings":["1 Pharmacoinformatics group, Research Programme on Biomedical Informatics (GRIB), Universitat Pompeu Fabra (UPF)-Hospital del Mar Medical Research Institute (IMIM), Barcelona, Spain, 2Department of Physics, Tampere University of Technology, Tampere, Finland and 3Institute of Biomedical Engineering, National Research Council of Italy (ISIB-CNR), Padua, Italy"],"affiliations":[{"raw_affiliation_string":"1 Pharmacoinformatics group, Research Programme on Biomedical Informatics (GRIB), Universitat Pompeu Fabra (UPF)-Hospital del Mar Medical Research Institute (IMIM), Barcelona, Spain, 2Department of Physics, Tampere University of Technology, Tampere, Finland and 3Institute of Biomedical Engineering, National Research Council of Italy (ISIB-CNR), Padua, Italy","institution_ids":["https://openalex.org/I166825849","https://openalex.org/I4210155236","https://openalex.org/I4210133110","https://openalex.org/I170486558"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5069377650","display_name":"Jana Selent","orcid":"https://orcid.org/0000-0002-1844-4449"},"institutions":[{"id":"https://openalex.org/I166825849","display_name":"Tampere University","ror":"https://ror.org/033003e23","country_code":"FI","type":"education","lineage":["https://openalex.org/I166825849"]},{"id":"https://openalex.org/I170486558","display_name":"Pompeu Fabra University","ror":"https://ror.org/04n0g0b29","country_code":"ES","type":"education","lineage":["https://openalex.org/I170486558"]},{"id":"https://openalex.org/I4210133110","display_name":"Tampere University","ror":null,"country_code":"FI","type":null,"lineage":["https://openalex.org/I4210133110"]},{"id":"https://openalex.org/I4210155236","display_name":"National Research Council","ror":"https://ror.org/04zaypm56","country_code":"IT","type":"funder","lineage":["https://openalex.org/I4210155236"]}],"countries":["ES","FI","IT"],"is_corresponding":false,"raw_author_name":"Jana Selent","raw_affiliation_strings":["1 Pharmacoinformatics group, Research Programme on Biomedical Informatics (GRIB), Universitat Pompeu Fabra (UPF)-Hospital del Mar Medical Research Institute (IMIM), Barcelona, Spain, 2Department of Physics, Tampere University of Technology, Tampere, Finland and 3Institute of Biomedical Engineering, National Research Council of Italy (ISIB-CNR), Padua, Italy"],"affiliations":[{"raw_affiliation_string":"1 Pharmacoinformatics group, Research Programme on Biomedical Informatics (GRIB), Universitat Pompeu Fabra (UPF)-Hospital del Mar Medical Research Institute (IMIM), Barcelona, Spain, 2Department of Physics, Tampere University of Technology, Tampere, Finland and 3Institute of Biomedical Engineering, National Research Council of Italy (ISIB-CNR), Padua, Italy","institution_ids":["https://openalex.org/I166825849","https://openalex.org/I4210155236","https://openalex.org/I4210133110","https://openalex.org/I170486558"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5003500154"],"corresponding_institution_ids":["https://openalex.org/I166825849","https://openalex.org/I170486558","https://openalex.org/I4210133110","https://openalex.org/I4210155236"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":5.9892,"has_fulltext":true,"cited_by_count":312,"citation_normalized_percentile":{"value":0.97162173,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":100},"biblio":{"volume":"30","issue":"10","first_page":"1478","last_page":"1480"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10407","display_name":"Lipid Membrane Structure and Behavior","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10407","display_name":"Lipid Membrane Structure and Behavior","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11582","display_name":"Nanopore and Nanochannel Transport Studies","score":0.9973999857902527,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/scripting-language","display_name":"Scripting language","score":0.7784005403518677},{"id":"https://openalex.org/keywords/plug-in","display_name":"Plug-in","score":0.7518743276596069},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6709734201431274},{"id":"https://openalex.org/keywords/source-code","display_name":"Source code","score":0.6473097801208496},{"id":"https://openalex.org/keywords/graphical-user-interface","display_name":"Graphical user interface","score":0.5465599298477173},{"id":"https://openalex.org/keywords/membrane","display_name":"Membrane","score":0.5265291929244995},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.4914451837539673},{"id":"https://openalex.org/keywords/python","display_name":"Python (programming language)","score":0.48644256591796875},{"id":"https://openalex.org/keywords/molecular-dynamics","display_name":"Molecular dynamics","score":0.46346014738082886},{"id":"https://openalex.org/keywords/interface","display_name":"Interface (matter)","score":0.44102028012275696},{"id":"https://openalex.org/keywords/documentation","display_name":"Documentation","score":0.4333762526512146},{"id":"https://openalex.org/keywords/code","display_name":"Code (set theory)","score":0.4248705506324768},{"id":"https://openalex.org/keywords/computational-science","display_name":"Computational science","score":0.34334132075309753},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.2378925383090973},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.09649389982223511},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.09158539772033691},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.08322030305862427}],"concepts":[{"id":"https://openalex.org/C61423126","wikidata":"https://www.wikidata.org/wiki/Q187432","display_name":"Scripting language","level":2,"score":0.7784005403518677},{"id":"https://openalex.org/C4924752","wikidata":"https://www.wikidata.org/wiki/Q184148","display_name":"Plug-in","level":2,"score":0.7518743276596069},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6709734201431274},{"id":"https://openalex.org/C43126263","wikidata":"https://www.wikidata.org/wiki/Q128751","display_name":"Source code","level":2,"score":0.6473097801208496},{"id":"https://openalex.org/C37789001","wikidata":"https://www.wikidata.org/wiki/Q782543","display_name":"Graphical user interface","level":2,"score":0.5465599298477173},{"id":"https://openalex.org/C41625074","wikidata":"https://www.wikidata.org/wiki/Q176088","display_name":"Membrane","level":2,"score":0.5265291929244995},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.4914451837539673},{"id":"https://openalex.org/C519991488","wikidata":"https://www.wikidata.org/wiki/Q28865","display_name":"Python (programming language)","level":2,"score":0.48644256591796875},{"id":"https://openalex.org/C59593255","wikidata":"https://www.wikidata.org/wiki/Q901663","display_name":"Molecular dynamics","level":2,"score":0.46346014738082886},{"id":"https://openalex.org/C113843644","wikidata":"https://www.wikidata.org/wiki/Q901882","display_name":"Interface (matter)","level":4,"score":0.44102028012275696},{"id":"https://openalex.org/C56666940","wikidata":"https://www.wikidata.org/wiki/Q788790","display_name":"Documentation","level":2,"score":0.4333762526512146},{"id":"https://openalex.org/C2776760102","wikidata":"https://www.wikidata.org/wiki/Q5139990","display_name":"Code (set theory)","level":3,"score":0.4248705506324768},{"id":"https://openalex.org/C459310","wikidata":"https://www.wikidata.org/wiki/Q117801","display_name":"Computational science","level":1,"score":0.34334132075309753},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.2378925383090973},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.09649389982223511},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.09158539772033691},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.08322030305862427},{"id":"https://openalex.org/C147597530","wikidata":"https://www.wikidata.org/wiki/Q369472","display_name":"Computational chemistry","level":1,"score":0.0},{"id":"https://openalex.org/C129307140","wikidata":"https://www.wikidata.org/wiki/Q6795880","display_name":"Maximum bubble pressure method","level":3,"score":0.0},{"id":"https://openalex.org/C157915830","wikidata":"https://www.wikidata.org/wiki/Q2928001","display_name":"Bubble","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008563","descriptor_name":"Membrane Lipids","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D008563","descriptor_name":"Membrane Lipids","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D008563","descriptor_name":"Membrane Lipids","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D008563","descriptor_name":"Membrane Lipids","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008563","descriptor_name":"Membrane Lipids","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008563","descriptor_name":"Membrane Lipids","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008565","descriptor_name":"Membrane Proteins","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D008565","descriptor_name":"Membrane Proteins","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D008565","descriptor_name":"Membrane Proteins","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D008565","descriptor_name":"Membrane Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008565","descriptor_name":"Membrane Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008565","descriptor_name":"Membrane Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008565","descriptor_name":"Membrane Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D008565","descriptor_name":"Membrane Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D008565","descriptor_name":"Membrane Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056004","descriptor_name":"Molecular Dynamics Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D056004","descriptor_name":"Molecular Dynamics Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D056004","descriptor_name":"Molecular Dynamics Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btu037","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btu037","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/30/10/1478/49859797/bioinformatics_30_10_1478.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:24451625","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24451625","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btu037","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btu037","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/30/10/1478/49859797/bioinformatics_30_10_1478.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G7779868532","display_name":null,"funder_award_id":"FEDER","funder_id":"https://openalex.org/F4320334923","funder_display_name":"Instituto de Salud Carlos III"}],"funders":[{"id":"https://openalex.org/F4320334923","display_name":"Instituto de Salud Carlos III","ror":"https://ror.org/00ca2c886"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2119109208.pdf","grobid_xml":"https://content.openalex.org/works/W2119109208.grobid-xml"},"referenced_works_count":12,"referenced_works":["https://openalex.org/W1587026990","https://openalex.org/W1969461041","https://openalex.org/W2029667189","https://openalex.org/W2054666552","https://openalex.org/W2066414494","https://openalex.org/W2121682672","https://openalex.org/W2125872855","https://openalex.org/W2153504150","https://openalex.org/W2157075780","https://openalex.org/W2168269595","https://openalex.org/W2179386188","https://openalex.org/W4230096730"],"related_works":["https://openalex.org/W3023169329","https://openalex.org/W4389470870","https://openalex.org/W2782165897","https://openalex.org/W4300438041","https://openalex.org/W2093416473","https://openalex.org/W2054104202","https://openalex.org/W2139703748","https://openalex.org/W2761254753","https://openalex.org/W1024825291","https://openalex.org/W2188981919"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2026,"cited_by_count":8},{"year":2025,"cited_by_count":47},{"year":2024,"cited_by_count":40},{"year":2023,"cited_by_count":34},{"year":2022,"cited_by_count":40},{"year":2021,"cited_by_count":33},{"year":2020,"cited_by_count":28},{"year":2019,"cited_by_count":20},{"year":2018,"cited_by_count":20},{"year":2017,"cited_by_count":19},{"year":2016,"cited_by_count":17},{"year":2015,"cited_by_count":5},{"year":2014,"cited_by_count":1}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}