{"id":"https://openalex.org/W2157290971","doi":"https://doi.org/10.1093/bioinformatics/btt689","title":"LipidGO: database for lipid-related GO terms and applications","display_name":"LipidGO: database for lipid-related GO terms and applications","publication_year":2013,"publication_date":"2013-12-01","ids":{"openalex":"https://openalex.org/W2157290971","doi":"https://doi.org/10.1093/bioinformatics/btt689","mag":"2157290971","pmid":"https://pubmed.ncbi.nlm.nih.gov/24297518"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btt689","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btt689","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/30/7/1043/17148041/btt689.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/30/7/1043/17148041/btt689.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5003315480","display_name":"Mengyuan Fan","orcid":null},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Mengyuan Fan","raw_affiliation_strings":["1 Department of Computer Science, National University of Singapore, 2NUS Graduate School of Integrative Science and Engineering, National University of Singapore, Singapore, 3National Research Foundation, Singapore, 4Department of Biochemistry and 5Department of Pathology, National University of Singapore, Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Computer Science, National University of Singapore, 2NUS Graduate School of Integrative Science and Engineering, National University of Singapore, Singapore, 3National Research Foundation, Singapore, 4Department of Biochemistry and 5Department of Pathology, National University of Singapore, Singapore","institution_ids":["https://openalex.org/I165932596"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058861955","display_name":"Hong Sang Low","orcid":null},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Hong Sang Low","raw_affiliation_strings":["1 Department of Computer Science, National University of Singapore, 2NUS Graduate School of Integrative Science and Engineering, National University of Singapore, Singapore, 3National Research Foundation, Singapore, 4Department of Biochemistry and 5Department of Pathology, National University of Singapore, Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Computer Science, National University of Singapore, 2NUS Graduate School of Integrative Science and Engineering, National University of Singapore, Singapore, 3National Research Foundation, Singapore, 4Department of Biochemistry and 5Department of Pathology, National University of Singapore, Singapore","institution_ids":["https://openalex.org/I165932596"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065829677","display_name":"Hufeng Zhou","orcid":"https://orcid.org/0000-0001-9382-5674"},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Hufeng Zhou","raw_affiliation_strings":["1 Department of Computer Science, National University of Singapore, 2NUS Graduate School of Integrative Science and Engineering, National University of Singapore, Singapore, 3National Research Foundation, Singapore, 4Department of Biochemistry and 5Department of Pathology, National University of Singapore, Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Computer Science, National University of Singapore, 2NUS Graduate School of Integrative Science and Engineering, National University of Singapore, Singapore, 3National Research Foundation, Singapore, 4Department of Biochemistry and 5Department of Pathology, National University of Singapore, Singapore","institution_ids":["https://openalex.org/I165932596"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076808018","display_name":"Markus R. Wenk","orcid":"https://orcid.org/0000-0001-5447-7881"},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Markus R. Wenk","raw_affiliation_strings":["1 Department of Computer Science, National University of Singapore, 2NUS Graduate School of Integrative Science and Engineering, National University of Singapore, Singapore, 3National Research Foundation, Singapore, 4Department of Biochemistry and 5Department of Pathology, National University of Singapore, Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Computer Science, National University of Singapore, 2NUS Graduate School of Integrative Science and Engineering, National University of Singapore, Singapore, 3National Research Foundation, Singapore, 4Department of Biochemistry and 5Department of Pathology, National University of Singapore, Singapore","institution_ids":["https://openalex.org/I165932596"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5012381970","display_name":"Limsoon Wong","orcid":"https://orcid.org/0000-0003-1241-5441"},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]}],"countries":["SG"],"is_corresponding":true,"raw_author_name":"Limsoon Wong","raw_affiliation_strings":["1 Department of Computer Science, National University of Singapore, 2NUS Graduate School of Integrative Science and Engineering, National University of Singapore, Singapore, 3National Research Foundation, Singapore, 4Department of Biochemistry and 5Department of Pathology, National University of Singapore, Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Computer Science, National University of Singapore, 2NUS Graduate School of Integrative Science and Engineering, National University of Singapore, Singapore, 3National Research Foundation, Singapore, 4Department of Biochemistry and 5Department of Pathology, National University of Singapore, Singapore","institution_ids":["https://openalex.org/I165932596"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5012381970"],"corresponding_institution_ids":["https://openalex.org/I165932596"],"apc_list":{"value":3989,"currency":"USD","value_usd":3989},"apc_paid":null,"fwci":0.1374,"has_fulltext":true,"cited_by_count":3,"citation_normalized_percentile":{"value":0.5531577,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"30","issue":"7","first_page":"1043","last_page":"1044"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.7612000107765198,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.7612000107765198,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.09459999948740005,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13127","display_name":"Biotin and Related Studies","score":0.034699998795986176,"subfield":{"id":"https://openalex.org/subfields/1307","display_name":"Cell Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5934560298919678},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.4357507526874542},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.39966243505477905},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.32783031463623047},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.14790001511573792}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5934560298919678},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.4357507526874542},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.39966243505477905},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.32783031463623047},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.14790001511573792}],"mesh":[{"descriptor_ui":"D008055","descriptor_name":"Lipids","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D008055","descriptor_name":"Lipids","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D008055","descriptor_name":"Lipids","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D050356","descriptor_name":"Lipid Metabolism","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D050356","descriptor_name":"Lipid Metabolism","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D050356","descriptor_name":"Lipid Metabolism","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btt689","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btt689","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/30/7/1043/17148041/btt689.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:24297518","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24297518","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":"Journal Article"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btt689","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btt689","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/30/7/1043/17148041/btt689.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1779897266","display_name":null,"funder_award_id":"2007\u201004","funder_id":"https://openalex.org/F4320320709","funder_display_name":"National Research Foundation Singapore"}],"funders":[{"id":"https://openalex.org/F4320320671","display_name":"National Research Foundation","ror":"https://ror.org/05s0g1g46"},{"id":"https://openalex.org/F4320320709","display_name":"National Research Foundation Singapore","ror":"https://ror.org/03cpyc314"},{"id":"https://openalex.org/F4320322724","display_name":"Ministry of Education, India","ror":"https://ror.org/048xjjh50"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2157290971.pdf","grobid_xml":"https://content.openalex.org/works/W2157290971.grobid-xml"},"referenced_works_count":5,"referenced_works":["https://openalex.org/W1975783279","https://openalex.org/W2023885834","https://openalex.org/W2103017472","https://openalex.org/W2127563440","https://openalex.org/W2141545183"],"related_works":["https://openalex.org/W4387497383","https://openalex.org/W2948807893","https://openalex.org/W2778153218","https://openalex.org/W2748952813","https://openalex.org/W1531601525","https://openalex.org/W2078814861","https://openalex.org/W2527526854","https://openalex.org/W2062208111","https://openalex.org/W1976181487","https://openalex.org/W1986764834"],"abstract_inverted_index":{"MOTIVATION:":[0],"Lipid,":[1],"an":[2],"essential":[3],"class":[4],"of":[5,19,40,107,113,120,130],"biomolecules,":[6],"is":[7,28,84,101,122,155],"receiving":[8],"increasing":[9],"attention":[10],"in":[11,52,59,140],"the":[12,17,29,128],"research":[13,51],"community,":[14],"especially":[15],"with":[16],"development":[18],"analytical":[20],"technique":[21],"like":[22],"mass":[23],"spectrometry.":[24],"Gene":[25],"Ontology":[26],"(GO)":[27],"de":[30],"facto":[31],"standard":[32],"function":[33,58,61],"annotation":[34],"scheme":[35],"for":[36],"gene":[37,108,138],"products.":[38],"Identification":[39],"both":[41],"explicit":[42],"and":[43,74,143],"implicit":[44],"lipid-related":[45,76,91,137,148],"GO":[46,77,82,92,114],"terms":[47,93,115],"will":[48],"help":[49],"lipid":[50,57,123],"many":[53],"ways,":[54],"e.g.":[55],"assigning":[56],"protein":[60],"prediction.":[62],"RESULTS:":[63],"We":[64],"have":[65],"constructed":[66,85],"a":[67,99,105,111],"Web":[68],"site":[69],"'LipidGO'":[70,131],"that":[71,86],"facilitates":[72],"browsing":[73],"searching":[75],"terms.":[78],"An":[79],"expandable":[80],"hierarchical":[81],"tree":[83],"allows":[87],"users":[88],"to":[89,103,116],"find":[90,117],"easily.":[94],"To":[95],"support":[96],"large-scale":[97],"analysis,":[98],"user":[100],"able":[102],"upload":[104],"list":[106,112],"products":[109,139],"or":[110],"out":[118],"which":[119],"them":[121],"related.":[124],"Finally,":[125],"we":[126],"demonstrate":[127],"usefulness":[129],"by":[132],"two":[133],"applications:":[134],"(i)":[135],"identifying":[136],"model":[141],"organisms":[142],"(ii)":[144],"discovering":[145],"potential":[146],"novel":[147],"molecular":[149],"functions":[150],"AVAILABILITY":[151],"AND":[152],"IMPLEMENTATION:":[153],"LipidGO":[154],"available":[156],"at":[157],"http://compbio.ddns.comp.nus.edu.sg/%7elipidgo/index.php.":[158]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2014,"cited_by_count":1}],"updated_date":"2026-08-21T09:56:20.448147","created_date":"2025-10-10T00:00:00"}
