{"id":"https://openalex.org/W2149427764","doi":"https://doi.org/10.1093/bioinformatics/btt631","title":"StochDecomp\u2014Matlab package for noise decomposition in stochastic biochemical systems","display_name":"StochDecomp\u2014Matlab package for noise decomposition in stochastic biochemical systems","publication_year":2013,"publication_date":"2013-11-04","ids":{"openalex":"https://openalex.org/W2149427764","doi":"https://doi.org/10.1093/bioinformatics/btt631","mag":"2149427764","pmid":"https://pubmed.ncbi.nlm.nih.gov/24191070"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btt631","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btt631","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5083420446","display_name":"Tomasz Jetka","orcid":"https://orcid.org/0000-0001-7449-9818"},"institutions":[{"id":"https://openalex.org/I4210087266","display_name":"Institute of Computer Science","ror":"https://ror.org/003fvp964","country_code":"PL","type":"facility","lineage":["https://openalex.org/I4210087266","https://openalex.org/I99542240"]},{"id":"https://openalex.org/I4210119410","display_name":"Institute of Fundamental Technological Research","ror":"https://ror.org/03fs4aq04","country_code":"PL","type":"facility","lineage":["https://openalex.org/I4210119410","https://openalex.org/I99542240"]},{"id":"https://openalex.org/I4654613","display_name":"University of Warsaw","ror":"https://ror.org/039bjqg32","country_code":"PL","type":"education","lineage":["https://openalex.org/I4654613"]},{"id":"https://openalex.org/I99542240","display_name":"Polish Academy of Sciences","ror":"https://ror.org/01dr6c206","country_code":"PL","type":"government","lineage":["https://openalex.org/I99542240"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Tomasz Jetka","raw_affiliation_strings":["1 Institute of Fundamental Technological Research, 2Institute of Computer Science, Polish Academy of Sciences, Warsaw, Poland, 3Faculty of Mathematics Informatics and Mechanics, Institute of Informatics, University of Warsaw, Warsaw, Poland and 4Division of Molecular Biosciences, Imperial College London, London, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Institute of Fundamental Technological Research, 2Institute of Computer Science, Polish Academy of Sciences, Warsaw, Poland, 3Faculty of Mathematics Informatics and Mechanics, Institute of Informatics, University of Warsaw, Warsaw, Poland and 4Division of Molecular Biosciences, Imperial College London, London, UK","institution_ids":["https://openalex.org/I4210087266","https://openalex.org/I4210119410","https://openalex.org/I4654613","https://openalex.org/I99542240"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039242385","display_name":"Agata Charzy\u0144ska","orcid":"https://orcid.org/0000-0003-4761-9831"},"institutions":[{"id":"https://openalex.org/I4210087266","display_name":"Institute of Computer Science","ror":"https://ror.org/003fvp964","country_code":"PL","type":"facility","lineage":["https://openalex.org/I4210087266","https://openalex.org/I99542240"]},{"id":"https://openalex.org/I4210119410","display_name":"Institute of Fundamental Technological Research","ror":"https://ror.org/03fs4aq04","country_code":"PL","type":"facility","lineage":["https://openalex.org/I4210119410","https://openalex.org/I99542240"]},{"id":"https://openalex.org/I4654613","display_name":"University of Warsaw","ror":"https://ror.org/039bjqg32","country_code":"PL","type":"education","lineage":["https://openalex.org/I4654613"]},{"id":"https://openalex.org/I99542240","display_name":"Polish Academy of Sciences","ror":"https://ror.org/01dr6c206","country_code":"PL","type":"government","lineage":["https://openalex.org/I99542240"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Agata Charzy\u0144ska","raw_affiliation_strings":["1 Institute of Fundamental Technological Research, 2Institute of Computer Science, Polish Academy of Sciences, Warsaw, Poland, 3Faculty of Mathematics Informatics and Mechanics, Institute of Informatics, University of Warsaw, Warsaw, Poland and 4Division of Molecular Biosciences, Imperial College London, London, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Institute of Fundamental Technological Research, 2Institute of Computer Science, Polish Academy of Sciences, Warsaw, Poland, 3Faculty of Mathematics Informatics and Mechanics, Institute of Informatics, University of Warsaw, Warsaw, Poland and 4Division of Molecular Biosciences, Imperial College London, London, UK","institution_ids":["https://openalex.org/I4210087266","https://openalex.org/I4210119410","https://openalex.org/I4654613","https://openalex.org/I99542240"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071617273","display_name":"Anna Gambin","orcid":"https://orcid.org/0000-0003-3476-3017"},"institutions":[{"id":"https://openalex.org/I4210087266","display_name":"Institute of Computer Science","ror":"https://ror.org/003fvp964","country_code":"PL","type":"facility","lineage":["https://openalex.org/I4210087266","https://openalex.org/I99542240"]},{"id":"https://openalex.org/I4210119410","display_name":"Institute of Fundamental Technological Research","ror":"https://ror.org/03fs4aq04","country_code":"PL","type":"facility","lineage":["https://openalex.org/I4210119410","https://openalex.org/I99542240"]},{"id":"https://openalex.org/I4654613","display_name":"University of Warsaw","ror":"https://ror.org/039bjqg32","country_code":"PL","type":"education","lineage":["https://openalex.org/I4654613"]},{"id":"https://openalex.org/I99542240","display_name":"Polish Academy of Sciences","ror":"https://ror.org/01dr6c206","country_code":"PL","type":"government","lineage":["https://openalex.org/I99542240"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Anna Gambin","raw_affiliation_strings":["1 Institute of Fundamental Technological Research, 2Institute of Computer Science, Polish Academy of Sciences, Warsaw, Poland, 3Faculty of Mathematics Informatics and Mechanics, Institute of Informatics, University of Warsaw, Warsaw, Poland and 4Division of Molecular Biosciences, Imperial College London, London, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Institute of Fundamental Technological Research, 2Institute of Computer Science, Polish Academy of Sciences, Warsaw, Poland, 3Faculty of Mathematics Informatics and Mechanics, Institute of Informatics, University of Warsaw, Warsaw, Poland and 4Division of Molecular Biosciences, Imperial College London, London, UK","institution_ids":["https://openalex.org/I4210087266","https://openalex.org/I4210119410","https://openalex.org/I4654613","https://openalex.org/I99542240"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042789303","display_name":"Michael P. H. Stumpf","orcid":"https://orcid.org/0000-0002-3577-1222"},"institutions":[{"id":"https://openalex.org/I4210087266","display_name":"Institute of Computer Science","ror":"https://ror.org/003fvp964","country_code":"PL","type":"facility","lineage":["https://openalex.org/I4210087266","https://openalex.org/I99542240"]},{"id":"https://openalex.org/I4210119410","display_name":"Institute of Fundamental Technological Research","ror":"https://ror.org/03fs4aq04","country_code":"PL","type":"facility","lineage":["https://openalex.org/I4210119410","https://openalex.org/I99542240"]},{"id":"https://openalex.org/I4654613","display_name":"University of Warsaw","ror":"https://ror.org/039bjqg32","country_code":"PL","type":"education","lineage":["https://openalex.org/I4654613"]},{"id":"https://openalex.org/I99542240","display_name":"Polish Academy of Sciences","ror":"https://ror.org/01dr6c206","country_code":"PL","type":"government","lineage":["https://openalex.org/I99542240"]}],"countries":["PL"],"is_corresponding":true,"raw_author_name":"Michael P.H. Stumpf","raw_affiliation_strings":["1 Institute of Fundamental Technological Research, 2Institute of Computer Science, Polish Academy of Sciences, Warsaw, Poland, 3Faculty of Mathematics Informatics and Mechanics, Institute of Informatics, University of Warsaw, Warsaw, Poland and 4Division of Molecular Biosciences, Imperial College London, London, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Institute of Fundamental Technological Research, 2Institute of Computer Science, Polish Academy of Sciences, Warsaw, Poland, 3Faculty of Mathematics Informatics and Mechanics, Institute of Informatics, University of Warsaw, Warsaw, Poland and 4Division of Molecular Biosciences, Imperial College London, London, UK","institution_ids":["https://openalex.org/I4210087266","https://openalex.org/I4210119410","https://openalex.org/I4654613","https://openalex.org/I99542240"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5020204733","display_name":"Micha\u0142 Komorowski","orcid":"https://orcid.org/0000-0002-7293-0042"},"institutions":[{"id":"https://openalex.org/I4210087266","display_name":"Institute of Computer Science","ror":"https://ror.org/003fvp964","country_code":"PL","type":"facility","lineage":["https://openalex.org/I4210087266","https://openalex.org/I99542240"]},{"id":"https://openalex.org/I4210119410","display_name":"Institute of Fundamental Technological Research","ror":"https://ror.org/03fs4aq04","country_code":"PL","type":"facility","lineage":["https://openalex.org/I4210119410","https://openalex.org/I99542240"]},{"id":"https://openalex.org/I4654613","display_name":"University of Warsaw","ror":"https://ror.org/039bjqg32","country_code":"PL","type":"education","lineage":["https://openalex.org/I4654613"]},{"id":"https://openalex.org/I99542240","display_name":"Polish Academy of Sciences","ror":"https://ror.org/01dr6c206","country_code":"PL","type":"government","lineage":["https://openalex.org/I99542240"]}],"countries":["PL"],"is_corresponding":true,"raw_author_name":"Micha\u0142 Komorowski","raw_affiliation_strings":["1 Institute of Fundamental Technological Research, 2Institute of Computer Science, Polish Academy of Sciences, Warsaw, Poland, 3Faculty of Mathematics Informatics and Mechanics, Institute of Informatics, University of Warsaw, Warsaw, Poland and 4Division of Molecular Biosciences, Imperial College London, London, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Institute of Fundamental Technological Research, 2Institute of Computer Science, Polish Academy of Sciences, Warsaw, Poland, 3Faculty of Mathematics Informatics and Mechanics, Institute of Informatics, University of Warsaw, Warsaw, Poland and 4Division of Molecular Biosciences, Imperial College London, London, UK","institution_ids":["https://openalex.org/I4210087266","https://openalex.org/I4210119410","https://openalex.org/I4654613","https://openalex.org/I99542240"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5020204733","https://openalex.org/A5042789303"],"corresponding_institution_ids":["https://openalex.org/I4210087266","https://openalex.org/I4210119410","https://openalex.org/I4654613","https://openalex.org/I99542240"],"apc_list":{"value":3989,"currency":"USD","value_usd":3989},"apc_paid":null,"fwci":0.4123,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.63984407,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"30","issue":"1","first_page":"137","last_page":"138"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.6496000289916992,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.6496000289916992,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11513","display_name":"stochastic dynamics and bifurcation","score":0.04820000007748604,"subfield":{"id":"https://openalex.org/subfields/3109","display_name":"Statistical and Nonlinear Physics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10136","display_name":"Statistical Methods and Inference","score":0.018400000408291817,"subfield":{"id":"https://openalex.org/subfields/2613","display_name":"Statistics and Probability"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/noise","display_name":"Noise (video)","score":0.7505584955215454},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6772974729537964},{"id":"https://openalex.org/keywords/matlab","display_name":"MATLAB","score":0.5587846040725708},{"id":"https://openalex.org/keywords/inference","display_name":"Inference","score":0.5466790795326233},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.5367051362991333},{"id":"https://openalex.org/keywords/decomposition","display_name":"Decomposition","score":0.5325412154197693},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.4242458939552307},{"id":"https://openalex.org/keywords/bayesian-probability","display_name":"Bayesian probability","score":0.421689510345459},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.33414986729621887},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.19109907746315002},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.11118564009666443}],"concepts":[{"id":"https://openalex.org/C99498987","wikidata":"https://www.wikidata.org/wiki/Q2210247","display_name":"Noise (video)","level":3,"score":0.7505584955215454},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6772974729537964},{"id":"https://openalex.org/C2780365114","wikidata":"https://www.wikidata.org/wiki/Q169478","display_name":"MATLAB","level":2,"score":0.5587846040725708},{"id":"https://openalex.org/C2776214188","wikidata":"https://www.wikidata.org/wiki/Q408386","display_name":"Inference","level":2,"score":0.5466790795326233},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.5367051362991333},{"id":"https://openalex.org/C124681953","wikidata":"https://www.wikidata.org/wiki/Q339062","display_name":"Decomposition","level":2,"score":0.5325412154197693},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.4242458939552307},{"id":"https://openalex.org/C107673813","wikidata":"https://www.wikidata.org/wiki/Q812534","display_name":"Bayesian probability","level":2,"score":0.421689510345459},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.33414986729621887},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.19109907746315002},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.11118564009666443},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001669","descriptor_name":"Biochemical Phenomena","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001669","descriptor_name":"Biochemical Phenomena","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001669","descriptor_name":"Biochemical Phenomena","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013269","descriptor_name":"Stochastic Processes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013269","descriptor_name":"Stochastic Processes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013269","descriptor_name":"Stochastic Processes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D050791","descriptor_name":"STAT Transcription Factors","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D050791","descriptor_name":"STAT Transcription Factors","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D050791","descriptor_name":"STAT Transcription Factors","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D053612","descriptor_name":"Janus Kinases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D053612","descriptor_name":"Janus Kinases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D053612","descriptor_name":"Janus Kinases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btt631","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btt631","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:24191070","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24191070","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":"Journal Article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G312646313","display_name":"Development of a high-throughput quantitative immunofluorescence method and stochastic modeling of signalling networks","funder_award_id":"BB/G530268/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G4795984044","display_name":"Mapping combinatorial stress responses in bacteria using chimeric proteins and probabilistic modelling","funder_award_id":"BB/G020434/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G7059294632","display_name":null,"funder_award_id":"BB/G020434/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G7525004261","display_name":null,"funder_award_id":"BB/G530268/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"}],"funders":[{"id":"https://openalex.org/F4320334629","display_name":"Biotechnology and Biological Sciences Research Council","ror":"https://ror.org/00cwqg982"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":9,"referenced_works":["https://openalex.org/W1974974415","https://openalex.org/W1986206712","https://openalex.org/W1992911524","https://openalex.org/W2102787760","https://openalex.org/W2112185150","https://openalex.org/W2141049087","https://openalex.org/W2143894094","https://openalex.org/W2151389393","https://openalex.org/W2171750046"],"related_works":["https://openalex.org/W4251298892","https://openalex.org/W2356013541","https://openalex.org/W2385444679","https://openalex.org/W3133868776","https://openalex.org/W2360644005","https://openalex.org/W2350667299","https://openalex.org/W2365027229","https://openalex.org/W4229851301","https://openalex.org/W2349721879","https://openalex.org/W2385577065"],"abstract_inverted_index":{"MOTIVATION:":[0],"Stochasticity":[1],"is":[2,124,132],"an":[3],"indispensable":[4],"aspect":[5],"of":[6,32,41,63,70,139],"biochemical":[7,22,90],"processes":[8],"at":[9],"the":[10,16,30,67,75,84,98,103,127],"cellular":[11],"level.":[12],"Studies":[13],"on":[14,126],"how":[15,83],"noise":[17,54,85,104,129],"enters":[18,86],"and":[19,51,87,95],"propagates":[20,88],"in":[21,34,89],"systems":[23],"provided":[24],"us":[25,59],"with":[26,118],"non-trivial":[27],"insights":[28],"into":[29],"origins":[31],"stochasticity,":[33],"total,":[35],"however,":[36],"they":[37],"constitute":[38],"a":[39,49,71,136],"patchwork":[40],"different":[42],"theoretical":[43],"analyses.":[44],"RESULTS:":[45],"Here":[46],"we":[47],"present":[48],"flexible":[50],"widely":[52],"applicable":[53],"decomposition":[55],"tool":[56],"that":[57,102],"allows":[58],"to":[60,66,81,134],"calculate":[61],"contributions":[62,105],"individual":[64,108],"reactions":[65,109],"total":[68],"variability":[69],"system's":[72],"output.":[73],"With":[74],"package":[76],"it":[77],"is,":[78],"therefore,":[79],"possible":[80],"quantify":[82],"systems.":[91,141],"We":[92],"also":[93],"demonstrate":[94],"exemplify":[96],"using":[97],"JAK-STAT":[99],"signalling":[100],"pathway":[101],"resulting":[106],"from":[107,113],"can":[110],"be":[111],"inferred":[112],"data":[114,116],"experimental":[115],"along":[117],"Bayesian":[119],"parameter":[120],"inference.":[121],"The":[122],"method":[123],"based":[125],"linear":[128],"approximation,":[130],"which":[131],"assumed":[133],"provide":[135],"reasonable":[137],"representation":[138],"analyzed":[140],"AVAILABILITY":[142],"AND":[143],"IMPLEMENTATION:":[144],"http://sourceforge.net/p/stochdecomp/":[145]},"counts_by_year":[{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":1}],"updated_date":"2026-08-21T09:56:20.448147","created_date":"2025-10-10T00:00:00"}
