{"id":"https://openalex.org/W2166999091","doi":"https://doi.org/10.1093/bioinformatics/btt608","title":"Identification of important regressor groups, subgroups and individuals via regularization methods: application to gut microbiome data","display_name":"Identification of important regressor groups, subgroups and individuals via regularization methods: application to gut microbiome data","publication_year":2013,"publication_date":"2013-10-24","ids":{"openalex":"https://openalex.org/W2166999091","doi":"https://doi.org/10.1093/bioinformatics/btt608","mag":"2166999091","pmid":"https://pubmed.ncbi.nlm.nih.gov/24162467"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btt608","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btt608","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/30/6/831/48920388/bioinformatics_30_6_831.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/30/6/831/48920388/bioinformatics_30_6_831.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5113720094","display_name":"Tanya P. Garcia","orcid":"https://orcid.org/0000-0001-9900-4025"},"institutions":[{"id":"https://openalex.org/I125029298","display_name":"Texas A&M Health Science Center","ror":"https://ror.org/01tx6pn92","country_code":"US","type":"education","lineage":["https://openalex.org/I125029298","https://openalex.org/I91045830"]},{"id":"https://openalex.org/I129604602","display_name":"The University of Sydney","ror":"https://ror.org/0384j8v12","country_code":"AU","type":"education","lineage":["https://openalex.org/I129604602"]},{"id":"https://openalex.org/I91045830","display_name":"Texas A&M University","ror":"https://ror.org/01f5ytq51","country_code":"US","type":"education","lineage":["https://openalex.org/I91045830"]}],"countries":["AU","US"],"is_corresponding":true,"raw_author_name":"Tanya P. Garcia","raw_affiliation_strings":["1 Department of Epidemiology & Biostatistics, School of Rural Public Health, Texas A&M Health Science Center, College Station, TX 77843-1266, USA, 2School of Mathematics and Statistics, University of Sydney, NSW 2006 Australia, 3Department of Statistics, Texas A&M University, College Station, TX 77843-3143, USA and 4Department of Poultry Science, Intercollegiate Faculty of Nutrition, Texas A&M University, College Station, TX 77840, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Epidemiology & Biostatistics, School of Rural Public Health, Texas A&M Health Science Center, College Station, TX 77843-1266, USA, 2School of Mathematics and Statistics, University of Sydney, NSW 2006 Australia, 3Department of Statistics, Texas A&M University, College Station, TX 77843-3143, USA and 4Department of Poultry Science, Intercollegiate Faculty of Nutrition, Texas A&M University, College Station, TX 77840, USA","institution_ids":["https://openalex.org/I125029298","https://openalex.org/I129604602","https://openalex.org/I91045830"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047479105","display_name":"Samuel M\u00fcller","orcid":"https://orcid.org/0000-0002-3087-8127"},"institutions":[{"id":"https://openalex.org/I125029298","display_name":"Texas A&M Health Science Center","ror":"https://ror.org/01tx6pn92","country_code":"US","type":"education","lineage":["https://openalex.org/I125029298","https://openalex.org/I91045830"]},{"id":"https://openalex.org/I129604602","display_name":"The University of Sydney","ror":"https://ror.org/0384j8v12","country_code":"AU","type":"education","lineage":["https://openalex.org/I129604602"]},{"id":"https://openalex.org/I91045830","display_name":"Texas A&M University","ror":"https://ror.org/01f5ytq51","country_code":"US","type":"education","lineage":["https://openalex.org/I91045830"]}],"countries":["AU","US"],"is_corresponding":false,"raw_author_name":"Samuel M\u00fcller","raw_affiliation_strings":["1 Department of Epidemiology & Biostatistics, School of Rural Public Health, Texas A&M Health Science Center, College Station, TX 77843-1266, USA, 2School of Mathematics and Statistics, University of Sydney, NSW 2006 Australia, 3Department of Statistics, Texas A&M University, College Station, TX 77843-3143, USA and 4Department of Poultry Science, Intercollegiate Faculty of Nutrition, Texas A&M University, College Station, TX 77840, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Epidemiology & Biostatistics, School of Rural Public Health, Texas A&M Health Science Center, College Station, TX 77843-1266, USA, 2School of Mathematics and Statistics, University of Sydney, NSW 2006 Australia, 3Department of Statistics, Texas A&M University, College Station, TX 77843-3143, USA and 4Department of Poultry Science, Intercollegiate Faculty of Nutrition, Texas A&M University, College Station, TX 77840, USA","institution_ids":["https://openalex.org/I125029298","https://openalex.org/I129604602","https://openalex.org/I91045830"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000822072","display_name":"Raymond J. Carroll","orcid":"https://orcid.org/0000-0002-5465-9682"},"institutions":[{"id":"https://openalex.org/I125029298","display_name":"Texas A&M Health Science Center","ror":"https://ror.org/01tx6pn92","country_code":"US","type":"education","lineage":["https://openalex.org/I125029298","https://openalex.org/I91045830"]},{"id":"https://openalex.org/I129604602","display_name":"The University of Sydney","ror":"https://ror.org/0384j8v12","country_code":"AU","type":"education","lineage":["https://openalex.org/I129604602"]},{"id":"https://openalex.org/I91045830","display_name":"Texas A&M University","ror":"https://ror.org/01f5ytq51","country_code":"US","type":"education","lineage":["https://openalex.org/I91045830"]}],"countries":["AU","US"],"is_corresponding":false,"raw_author_name":"Raymond J. Carroll","raw_affiliation_strings":["1 Department of Epidemiology & Biostatistics, School of Rural Public Health, Texas A&M Health Science Center, College Station, TX 77843-1266, USA, 2School of Mathematics and Statistics, University of Sydney, NSW 2006 Australia, 3Department of Statistics, Texas A&M University, College Station, TX 77843-3143, USA and 4Department of Poultry Science, Intercollegiate Faculty of Nutrition, Texas A&M University, College Station, TX 77840, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Epidemiology & Biostatistics, School of Rural Public Health, Texas A&M Health Science Center, College Station, TX 77843-1266, USA, 2School of Mathematics and Statistics, University of Sydney, NSW 2006 Australia, 3Department of Statistics, Texas A&M University, College Station, TX 77843-3143, USA and 4Department of Poultry Science, Intercollegiate Faculty of Nutrition, Texas A&M University, College Station, TX 77840, USA","institution_ids":["https://openalex.org/I125029298","https://openalex.org/I129604602","https://openalex.org/I91045830"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5111567373","display_name":"Rosemary L. Walzem","orcid":null},"institutions":[{"id":"https://openalex.org/I125029298","display_name":"Texas A&M Health Science Center","ror":"https://ror.org/01tx6pn92","country_code":"US","type":"education","lineage":["https://openalex.org/I125029298","https://openalex.org/I91045830"]},{"id":"https://openalex.org/I129604602","display_name":"The University of Sydney","ror":"https://ror.org/0384j8v12","country_code":"AU","type":"education","lineage":["https://openalex.org/I129604602"]},{"id":"https://openalex.org/I91045830","display_name":"Texas A&M University","ror":"https://ror.org/01f5ytq51","country_code":"US","type":"education","lineage":["https://openalex.org/I91045830"]}],"countries":["AU","US"],"is_corresponding":false,"raw_author_name":"Rosemary L. Walzem","raw_affiliation_strings":["1 Department of Epidemiology & Biostatistics, School of Rural Public Health, Texas A&M Health Science Center, College Station, TX 77843-1266, USA, 2School of Mathematics and Statistics, University of Sydney, NSW 2006 Australia, 3Department of Statistics, Texas A&M University, College Station, TX 77843-3143, USA and 4Department of Poultry Science, Intercollegiate Faculty of Nutrition, Texas A&M University, College Station, TX 77840, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Epidemiology & Biostatistics, School of Rural Public Health, Texas A&M Health Science Center, College Station, TX 77843-1266, USA, 2School of Mathematics and Statistics, University of Sydney, NSW 2006 Australia, 3Department of Statistics, Texas A&M University, College Station, TX 77843-3143, USA and 4Department of Poultry Science, Intercollegiate Faculty of Nutrition, Texas A&M University, College Station, TX 77840, USA","institution_ids":["https://openalex.org/I125029298","https://openalex.org/I129604602","https://openalex.org/I91045830"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5113720094"],"corresponding_institution_ids":["https://openalex.org/I125029298","https://openalex.org/I129604602","https://openalex.org/I91045830"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.9634,"has_fulltext":false,"cited_by_count":41,"citation_normalized_percentile":{"value":0.7524905,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"30","issue":"6","first_page":"831","last_page":"837"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10066","display_name":"Gut microbiota and health","score":0.9807000160217285,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10066","display_name":"Gut microbiota and health","score":0.9807000160217285,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11288","display_name":"Clostridium difficile and Clostridium perfringens research","score":0.004699999932199717,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10845","display_name":"Advanced Causal Inference Techniques","score":0.0012000000569969416,"subfield":{"id":"https://openalex.org/subfields/2613","display_name":"Statistics and Probability"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.661801815032959},{"id":"https://openalex.org/keywords/microbiome","display_name":"Microbiome","score":0.6114327311515808},{"id":"https://openalex.org/keywords/gut-microbiome","display_name":"Gut microbiome","score":0.6112396717071533},{"id":"https://openalex.org/keywords/regularization","display_name":"Regularization (linguistics)","score":0.5793892741203308},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.48334142565727234},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4718632400035858},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.355341374874115},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3122061789035797},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2913942337036133},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.2804795503616333},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.2676292657852173},{"id":"https://openalex.org/keywords/ecology","display_name":"Ecology","score":0.07799211144447327}],"concepts":[{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.661801815032959},{"id":"https://openalex.org/C143121216","wikidata":"https://www.wikidata.org/wiki/Q1330402","display_name":"Microbiome","level":2,"score":0.6114327311515808},{"id":"https://openalex.org/C3019978661","wikidata":"https://www.wikidata.org/wiki/Q739734","display_name":"Gut microbiome","level":3,"score":0.6112396717071533},{"id":"https://openalex.org/C2776135515","wikidata":"https://www.wikidata.org/wiki/Q17143721","display_name":"Regularization (linguistics)","level":2,"score":0.5793892741203308},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.48334142565727234},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4718632400035858},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.355341374874115},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3122061789035797},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2913942337036133},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.2804795503616333},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.2676292657852173},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.07799211144447327}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D041981","descriptor_name":"Gastrointestinal Tract","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D041981","descriptor_name":"Gastrointestinal Tract","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D041981","descriptor_name":"Gastrointestinal Tract","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btt608","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btt608","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/30/6/831/48920388/bioinformatics_30_6_831.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:24162467","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24162467","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:europepmc.org:3323454","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3957069","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:opus.lib.uts.edu.au:10453/117872","is_oa":false,"landing_page_url":"http://hdl.handle.net/10453/117872","pdf_url":null,"source":{"id":"https://openalex.org/S4306401357","display_name":"UTS ePRESS (University of Technology Sydney)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I114017466","host_organization_name":"University of Technology Sydney","host_organization_lineage":["https://openalex.org/I114017466"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Journal Article"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btt608","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btt608","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/30/6/831/48920388/bioinformatics_30_6_831.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2417582528","display_name":null,"funder_award_id":"R25T-CA090301","funder_id":"https://openalex.org/F4320337351","funder_display_name":"National Cancer Institute"},{"id":"https://openalex.org/G2700991700","display_name":null,"funder_award_id":"(R37-CA057030)","funder_id":"https://openalex.org/F4320337351","funder_display_name":"National Cancer Institute"},{"id":"https://openalex.org/G3097535683","display_name":null,"funder_award_id":"R25 CA090301","funder_id":"https://openalex.org/F4320337351","funder_display_name":"National Cancer Institute"},{"id":"https://openalex.org/G5234310444","display_name":null,"funder_award_id":"R01 CA057030","funder_id":"https://openalex.org/F4320337351","funder_display_name":"National Cancer Institute"}],"funders":[{"id":"https://openalex.org/F4320337351","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81"}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W2166999091.pdf"},"referenced_works_count":36,"referenced_works":["https://openalex.org/W33214042","https://openalex.org/W1539012881","https://openalex.org/W1588282782","https://openalex.org/W1678521212","https://openalex.org/W1899259633","https://openalex.org/W1985882893","https://openalex.org/W1987371344","https://openalex.org/W1989376243","https://openalex.org/W1994309289","https://openalex.org/W1994897986","https://openalex.org/W2023615726","https://openalex.org/W2057411492","https://openalex.org/W2063978378","https://openalex.org/W2071423986","https://openalex.org/W2080818547","https://openalex.org/W2094054923","https://openalex.org/W2097478615","https://openalex.org/W2109907994","https://openalex.org/W2110065044","https://openalex.org/W2113328646","https://openalex.org/W2116846792","https://openalex.org/W2131415145","https://openalex.org/W2135046866","https://openalex.org/W2138019504","https://openalex.org/W2146482778","https://openalex.org/W2157539068","https://openalex.org/W2158940042","https://openalex.org/W2160450758","https://openalex.org/W2163552032","https://openalex.org/W2596585349","https://openalex.org/W3099503819","https://openalex.org/W3103144163","https://openalex.org/W6632282575","https://openalex.org/W6676181923","https://openalex.org/W6676664377","https://openalex.org/W6681413097"],"related_works":["https://openalex.org/W2994966085","https://openalex.org/W4293056667","https://openalex.org/W3044286215","https://openalex.org/W2621141937","https://openalex.org/W4312476285","https://openalex.org/W2793187602","https://openalex.org/W3044328089","https://openalex.org/W2333607221","https://openalex.org/W4213248990","https://openalex.org/W2902848561"],"abstract_inverted_index":{"MOTIVATION:":[0],"Gut":[1],"microbiota":[2,15,46,120],"can":[3],"be":[4,29],"classified":[5,48],"at":[6,23,49,72,162],"multiple":[7,73],"taxonomy":[8,25,51,74],"levels.":[9,75],"Strategies":[10],"to":[11,17,118],"use":[12],"changes":[13],"in":[14,142],"composition":[16],"effect":[18],"health":[19],"improvements":[20],"require":[21],"knowing":[22],"which":[24,88,124,146],"level":[26],"interventions":[27,132],"should":[28],"aimed.":[30],"Identifying":[31],"these":[32],"important":[33,70],"levels":[34,126],"is":[35,140,147],"difficult,":[36],"however,":[37],"because":[38],"most":[39,128],"statistical":[40],"methods":[41],"only":[42],"consider":[43],"when":[44],"the":[45,151],"are":[47,79,160],"one":[50],"level,":[52],"not":[53],"multiple.":[54],"RESULTS:":[55],"Using":[56],"L1":[57],"and":[58,105,111],"L2":[59],"regularizations,":[60],"we":[61,122],"developed":[62],"a":[63,82],"new":[64,138],"variable":[65],"selection":[66],"method":[67,95,117],"that":[68],"identifies":[69],"features":[71],"The":[76,137],"regularization":[77],"parameters":[78],"chosen":[80],"by":[81,130],"new,":[83],"data-adaptive,":[84],"repeated":[85],"cross-validation":[86],"approach,":[87],"performed":[89],"well.":[90],"In":[91],"simulation":[92],"studies,":[93],"our":[94,116],"outperformed":[96],"competing":[97],"methods:":[98],"it":[99],"more":[100],"often":[101],"selected":[102],"significant":[103],"variables,":[104],"had":[106],"small":[107],"false":[108],"discovery":[109],"rates":[110],"acceptable":[112],"false-positive":[113],"rates.":[114],"Applying":[115],"gut":[119],"data,":[121],"found":[123],"taxonomic":[125],"were":[127],"altered":[129],"specific":[131],"or":[133],"physiological":[134],"status.":[135],"AVAILABILITY:":[136],"approach":[139],"implemented":[141],"an":[143],"R":[144],"package,":[145],"freely":[148],"available":[149,161],"from":[150],"corresponding":[152],"author.":[153],"CONTACT:":[154],"tpgarcia@srph.tamhsc.edu":[155],"SUPPLEMENTARY":[156],"INFORMATION:":[157],"Supplementary":[158],"data":[159],"Bioinformatics":[163],"online.":[164]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":9},{"year":2019,"cited_by_count":4},{"year":2018,"cited_by_count":4},{"year":2017,"cited_by_count":8},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":4}],"updated_date":"2026-08-01T09:00:35.917206","created_date":"2025-10-10T00:00:00"}
