{"id":"https://openalex.org/W2161027665","doi":"https://doi.org/10.1093/bioinformatics/btt563","title":"Lep-MAP: fast and accurate linkage map construction for large SNP datasets","display_name":"Lep-MAP: fast and accurate linkage map construction for large SNP datasets","publication_year":2013,"publication_date":"2013-09-26","ids":{"openalex":"https://openalex.org/W2161027665","doi":"https://doi.org/10.1093/bioinformatics/btt563","mag":"2161027665","pmid":"https://pubmed.ncbi.nlm.nih.gov/24078685"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btt563","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btt563","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/29/24/3128/25024839/btt563.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/29/24/3128/25024839/btt563.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5043716467","display_name":"Pasi Rastas","orcid":"https://orcid.org/0000-0003-2768-1339"},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]}],"countries":["FI"],"is_corresponding":true,"raw_author_name":"Pasi Rastas","raw_affiliation_strings":["1 Department of Biosciences, Metapopulation Research Group, University of Helsinki, P.O. Box 65, FI-00014, Finland and 2Institute of Biotechnology, University of Helsinki, P.O. Box 56, FI-00014, Finland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Biosciences, Metapopulation Research Group, University of Helsinki, P.O. Box 65, FI-00014, Finland and 2Institute of Biotechnology, University of Helsinki, P.O. Box 56, FI-00014, Finland","institution_ids":["https://openalex.org/I133731052"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048842264","display_name":"Lars Paul\u00edn","orcid":"https://orcid.org/0000-0003-0923-1254"},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Lars Paulin","raw_affiliation_strings":["1 Department of Biosciences, Metapopulation Research Group, University of Helsinki, P.O. Box 65, FI-00014, Finland and 2Institute of Biotechnology, University of Helsinki, P.O. Box 56, FI-00014, Finland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Biosciences, Metapopulation Research Group, University of Helsinki, P.O. Box 65, FI-00014, Finland and 2Institute of Biotechnology, University of Helsinki, P.O. Box 56, FI-00014, Finland","institution_ids":["https://openalex.org/I133731052"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028523124","display_name":"Ilkka Hanski","orcid":null},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Ilkka Hanski","raw_affiliation_strings":["1 Department of Biosciences, Metapopulation Research Group, University of Helsinki, P.O. Box 65, FI-00014, Finland and 2Institute of Biotechnology, University of Helsinki, P.O. Box 56, FI-00014, Finland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Biosciences, Metapopulation Research Group, University of Helsinki, P.O. Box 65, FI-00014, Finland and 2Institute of Biotechnology, University of Helsinki, P.O. Box 56, FI-00014, Finland","institution_ids":["https://openalex.org/I133731052"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050088970","display_name":"Rainer Lehtonen","orcid":"https://orcid.org/0000-0002-8343-0318"},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Rainer Lehtonen","raw_affiliation_strings":["1 Department of Biosciences, Metapopulation Research Group, University of Helsinki, P.O. Box 65, FI-00014, Finland and 2Institute of Biotechnology, University of Helsinki, P.O. Box 56, FI-00014, Finland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Biosciences, Metapopulation Research Group, University of Helsinki, P.O. Box 65, FI-00014, Finland and 2Institute of Biotechnology, University of Helsinki, P.O. Box 56, FI-00014, Finland","institution_ids":["https://openalex.org/I133731052"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5008533865","display_name":"Petri Auvinen","orcid":"https://orcid.org/0000-0002-3947-4778"},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Petri Auvinen","raw_affiliation_strings":["1 Department of Biosciences, Metapopulation Research Group, University of Helsinki, P.O. Box 65, FI-00014, Finland and 2Institute of Biotechnology, University of Helsinki, P.O. Box 56, FI-00014, Finland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Biosciences, Metapopulation Research Group, University of Helsinki, P.O. Box 65, FI-00014, Finland and 2Institute of Biotechnology, University of Helsinki, P.O. Box 56, FI-00014, Finland","institution_ids":["https://openalex.org/I133731052"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5043716467"],"corresponding_institution_ids":["https://openalex.org/I133731052"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":7.3334,"has_fulltext":true,"cited_by_count":127,"citation_normalized_percentile":{"value":0.97468281,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":96,"max":100},"biblio":{"volume":"29","issue":"24","first_page":"3128","last_page":"3134"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10012","display_name":"Genetic diversity and population structure","score":0.6197999715805054,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10012","display_name":"Genetic diversity and population structure","score":0.6197999715805054,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.14020000398159027,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11974","display_name":"Lepidoptera: Biology and Taxonomy","score":0.07400000095367432,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/linkage","display_name":"Linkage (software)","score":0.776447057723999},{"id":"https://openalex.org/keywords/snp","display_name":"SNP","score":0.6984702348709106},{"id":"https://openalex.org/keywords/genetic-linkage-map","display_name":"Genetic linkage map","score":0.6129482984542847},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.554976224899292},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.4409593939781189},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.40219902992248535},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.33487847447395325},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.32621335983276367},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2914271354675293},{"id":"https://openalex.org/keywords/gene-mapping","display_name":"Gene mapping","score":0.20611023902893066},{"id":"https://openalex.org/keywords/single-nucleotide-polymorphism","display_name":"Single-nucleotide polymorphism","score":0.1759757101535797},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.0676228404045105},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.05539423227310181},{"id":"https://openalex.org/keywords/genotype","display_name":"Genotype","score":0.05094149708747864}],"concepts":[{"id":"https://openalex.org/C31266012","wikidata":"https://www.wikidata.org/wiki/Q6554340","display_name":"Linkage (software)","level":3,"score":0.776447057723999},{"id":"https://openalex.org/C139275648","wikidata":"https://www.wikidata.org/wiki/Q17134011","display_name":"SNP","level":5,"score":0.6984702348709106},{"id":"https://openalex.org/C2910604640","wikidata":"https://www.wikidata.org/wiki/Q843863","display_name":"Genetic linkage map","level":5,"score":0.6129482984542847},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.554976224899292},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.4409593939781189},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.40219902992248535},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.33487847447395325},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.32621335983276367},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2914271354675293},{"id":"https://openalex.org/C122735190","wikidata":"https://www.wikidata.org/wiki/Q715789","display_name":"Gene mapping","level":4,"score":0.20611023902893066},{"id":"https://openalex.org/C153209595","wikidata":"https://www.wikidata.org/wiki/Q501128","display_name":"Single-nucleotide polymorphism","level":4,"score":0.1759757101535797},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0676228404045105},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.05539423227310181},{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.05094149708747864},{"id":"https://openalex.org/C30481170","wikidata":"https://www.wikidata.org/wiki/Q37748","display_name":"Chromosome","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006239","descriptor_name":"Haplotypes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006239","descriptor_name":"Haplotypes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006239","descriptor_name":"Haplotypes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007915","descriptor_name":"Lepidoptera","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D007915","descriptor_name":"Lepidoptera","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D007915","descriptor_name":"Lepidoptera","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D008040","descriptor_name":"Genetic Linkage","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008040","descriptor_name":"Genetic Linkage","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008040","descriptor_name":"Genetic Linkage","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008126","descriptor_name":"Lod Score","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008126","descriptor_name":"Lod Score","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008126","descriptor_name":"Lod Score","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008540","descriptor_name":"Meiosis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D008540","descriptor_name":"Meiosis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D008540","descriptor_name":"Meiosis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019476","descriptor_name":"Insect Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D019476","descriptor_name":"Insect Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D019476","descriptor_name":"Insect Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btt563","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btt563","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/29/24/3128/25024839/btt563.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:24078685","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24078685","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:europepmc.org:3408194","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4433499","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btt563","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btt563","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/29/24/3128/25024839/btt563.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/17","score":0.47999998927116394,"display_name":"Partnerships for the goals"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2161027665.pdf","grobid_xml":"https://content.openalex.org/works/W2161027665.grobid-xml"},"referenced_works_count":34,"referenced_works":["https://openalex.org/W96717503","https://openalex.org/W625539674","https://openalex.org/W1916874742","https://openalex.org/W1971877999","https://openalex.org/W1980073965","https://openalex.org/W1980615011","https://openalex.org/W1998158007","https://openalex.org/W2009570821","https://openalex.org/W2011039300","https://openalex.org/W2017428806","https://openalex.org/W2024060531","https://openalex.org/W2031354115","https://openalex.org/W2048619346","https://openalex.org/W2082812376","https://openalex.org/W2095882149","https://openalex.org/W2100402143","https://openalex.org/W2100642871","https://openalex.org/W2103441770","https://openalex.org/W2108234281","https://openalex.org/W2112238757","https://openalex.org/W2116053845","https://openalex.org/W2118428126","https://openalex.org/W2119896452","https://openalex.org/W2123385088","https://openalex.org/W2128430914","https://openalex.org/W2143107741","https://openalex.org/W2145758748","https://openalex.org/W2164031281","https://openalex.org/W2166754225","https://openalex.org/W2342204193","https://openalex.org/W4245668478","https://openalex.org/W4285719527","https://openalex.org/W4388310941","https://openalex.org/W6603918257"],"related_works":["https://openalex.org/W4282976635","https://openalex.org/W2362702199","https://openalex.org/W2067086158","https://openalex.org/W2350014578","https://openalex.org/W2971935265","https://openalex.org/W2377745469","https://openalex.org/W2388530532","https://openalex.org/W2052099747","https://openalex.org/W2036087730","https://openalex.org/W2348791338"],"abstract_inverted_index":{"MOTIVATION:":[0],"Current":[1],"high-throughput":[2],"sequencing":[3,201],"technologies":[4],"allow":[5],"cost-efficient":[6],"genotyping":[7],"of":[8,10,17,39,76,140,176],"millions":[9],"single":[11],"nucleotide":[12],"polymorphisms":[13],"(SNPs)":[14],"for":[15,26,34,94],"hundreds":[16],"samples.":[18],"However,":[19],"the":[20,177,207,223,227],"tools":[21],"that":[22,160],"are":[23,30,229],"currently":[24],"available":[25,230],"constructing":[27,95],"linkage":[28,67,97,128,174],"maps":[29,38,98],"not":[31],"well":[32,63],"suited":[33],"large":[35,40],"datasets.":[36],"Linkage":[37],"datasets":[41,228],"would":[42],"be":[43],"helpful":[44],"in":[45,65,149,154,156,206],"de":[46],"novo":[47],"genome":[48,53,77],"assembly":[49],"by":[50,57,131],"facilitating":[51],"comprehensive":[52],"validation":[54],"and":[55,68,79,107,110,125,142,167,226],"refinement":[56],"enabling":[58],"chimeric":[59],"scaffold":[60],"detection,":[61],"as":[62,64],"family-based":[66],"association":[69],"studies,":[70],"quantitative":[71],"trait":[72],"locus":[73],"mapping,":[74],"analysis":[75],"synteny":[78],"other":[80,144,163],"complex":[81],"genomic":[82],"data":[83,120,189],"analyses.":[84],"RESULTS:":[85],"We":[86,158,170],"describe":[87],"a":[88,137,172,193],"novel":[89,194],"tool,":[90],"called":[91],"Lepidoptera-MAP":[92],"(Lep-MAP),":[93],"accurate":[96],"with":[99,146,183,192,222],"ultradense":[100],"genome-wide":[101,173],"SNP":[102],"data.":[103,169],"Lep-MAP":[104,161],"is":[105,204],"fast":[106],"memory":[108],"efficient":[109],"largely":[111],"automated,":[112],"requiring":[113],"minimal":[114],"user":[115],"interaction.":[116],"It":[117],"uses":[118],"simultaneously":[119],"on":[121,165],"multiple":[122],"outbred":[123],"families":[124],"can":[126],"increase":[127],"map":[129,175],"accuracy":[130],"taking":[132],"into":[133],"account":[134],"achiasmatic":[135],"meiosis,":[136],"special":[138],"feature":[139],"Lepidoptera":[141],"some":[143],"taxa":[145],"no":[147],"recombination":[148,153],"one":[150],"sex":[151],"(no":[152],"females":[155],"Lepidoptera).":[157],"demonstrate":[159],"outperforms":[162],"methods":[164],"real":[166],"simulated":[168],"construct":[171],"Glanville":[178],"fritillary":[179],"butterfly":[180],"(Melitaea":[181],"cinxia)":[182],"over":[184],"40":[185],"000":[186],"SNPs.":[187],"The":[188],"were":[190],"generated":[191],"in-house":[195],"SOLiD":[196],"restriction":[197],"site-associated":[198],"DNA":[199],"tag":[200],"protocol,":[202],"which":[203],"described":[205],"online":[208],"supplementary":[209],"material.":[210],"AVAILABILITY":[211],"AND":[212],"IMPLEMENTATION:":[213],"Java":[214],"source":[215],"code":[216],"under":[217],"GNU":[218],"general":[219],"public":[220],"license":[221],"compiled":[224],"classes":[225],"from":[231],"http://sourceforge.net/users/lep-map.":[232]},"counts_by_year":[{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":8},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":5},{"year":2020,"cited_by_count":14},{"year":2019,"cited_by_count":15},{"year":2018,"cited_by_count":19},{"year":2017,"cited_by_count":24},{"year":2016,"cited_by_count":12},{"year":2015,"cited_by_count":13},{"year":2014,"cited_by_count":7}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
