{"id":"https://openalex.org/W2118521406","doi":"https://doi.org/10.1093/bioinformatics/btt480","title":"A new statistic for identifying batch effects in high-throughput genomic data that uses guided principal component analysis","display_name":"A new statistic for identifying batch effects in high-throughput genomic data that uses guided principal component analysis","publication_year":2013,"publication_date":"2013-08-19","ids":{"openalex":"https://openalex.org/W2118521406","doi":"https://doi.org/10.1093/bioinformatics/btt480","mag":"2118521406","pmid":"https://pubmed.ncbi.nlm.nih.gov/23958724"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btt480","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btt480","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/29/22/2877/17099626/btt480.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/29/22/2877/17099626/btt480.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5020349673","display_name":"Sarah E. Reese","orcid":"https://orcid.org/0000-0002-2127-1454"},"institutions":[{"id":"https://openalex.org/I184840846","display_name":"Virginia Commonwealth University","ror":"https://ror.org/02nkdxk79","country_code":"US","type":"education","lineage":["https://openalex.org/I184840846"]},{"id":"https://openalex.org/I1330342723","display_name":"Mayo Clinic","ror":"https://ror.org/02qp3tb03","country_code":"US","type":"funder","lineage":["https://openalex.org/I1330342723"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Sarah E. Reese","raw_affiliation_strings":["1 Department of Biostatistics, 2Biostatistics Shared Resource Core, VCU Massey Cancer Center, Virginia Commonwealth University, Richmond, VA 23284, USA, 3Division of Biomedical Statistics and Informatics and 4Division of Epidemiology, Department of Health Sciences Research, Mayo Clinic, Rochester, MN 55905, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Biostatistics, 2Biostatistics Shared Resource Core, VCU Massey Cancer Center, Virginia Commonwealth University, Richmond, VA 23284, USA, 3Division of Biomedical Statistics and Informatics and 4Division of Epidemiology, Department of Health Sciences Research, Mayo Clinic, Rochester, MN 55905, USA","institution_ids":["https://openalex.org/I184840846","https://openalex.org/I1330342723"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070476953","display_name":"Kellie J. Archer","orcid":"https://orcid.org/0000-0003-1555-5781"},"institutions":[{"id":"https://openalex.org/I184840846","display_name":"Virginia Commonwealth University","ror":"https://ror.org/02nkdxk79","country_code":"US","type":"education","lineage":["https://openalex.org/I184840846"]},{"id":"https://openalex.org/I1330342723","display_name":"Mayo Clinic","ror":"https://ror.org/02qp3tb03","country_code":"US","type":"funder","lineage":["https://openalex.org/I1330342723"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kellie J. Archer","raw_affiliation_strings":["1 Department of Biostatistics, 2Biostatistics Shared Resource Core, VCU Massey Cancer Center, Virginia Commonwealth University, Richmond, VA 23284, USA, 3Division of Biomedical Statistics and Informatics and 4Division of Epidemiology, Department of Health Sciences Research, Mayo Clinic, Rochester, MN 55905, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Biostatistics, 2Biostatistics Shared Resource Core, VCU Massey Cancer Center, Virginia Commonwealth University, Richmond, VA 23284, USA, 3Division of Biomedical Statistics and Informatics and 4Division of Epidemiology, Department of Health Sciences Research, Mayo Clinic, Rochester, MN 55905, USA","institution_ids":["https://openalex.org/I184840846","https://openalex.org/I1330342723"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014433885","display_name":"Terry M. Therneau","orcid":"https://orcid.org/0000-0003-1490-6711"},"institutions":[{"id":"https://openalex.org/I184840846","display_name":"Virginia Commonwealth University","ror":"https://ror.org/02nkdxk79","country_code":"US","type":"education","lineage":["https://openalex.org/I184840846"]},{"id":"https://openalex.org/I1330342723","display_name":"Mayo Clinic","ror":"https://ror.org/02qp3tb03","country_code":"US","type":"funder","lineage":["https://openalex.org/I1330342723"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Terry M. Therneau","raw_affiliation_strings":["1 Department of Biostatistics, 2Biostatistics Shared Resource Core, VCU Massey Cancer Center, Virginia Commonwealth University, Richmond, VA 23284, USA, 3Division of Biomedical Statistics and Informatics and 4Division of Epidemiology, Department of Health Sciences Research, Mayo Clinic, Rochester, MN 55905, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Biostatistics, 2Biostatistics Shared Resource Core, VCU Massey Cancer Center, Virginia Commonwealth University, Richmond, VA 23284, USA, 3Division of Biomedical Statistics and Informatics and 4Division of Epidemiology, Department of Health Sciences Research, Mayo Clinic, Rochester, MN 55905, USA","institution_ids":["https://openalex.org/I184840846","https://openalex.org/I1330342723"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038589760","display_name":"Elizabeth J. Atkinson","orcid":"https://orcid.org/0000-0002-1191-3775"},"institutions":[{"id":"https://openalex.org/I184840846","display_name":"Virginia Commonwealth University","ror":"https://ror.org/02nkdxk79","country_code":"US","type":"education","lineage":["https://openalex.org/I184840846"]},{"id":"https://openalex.org/I1330342723","display_name":"Mayo Clinic","ror":"https://ror.org/02qp3tb03","country_code":"US","type":"funder","lineage":["https://openalex.org/I1330342723"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Elizabeth J. Atkinson","raw_affiliation_strings":["1 Department of Biostatistics, 2Biostatistics Shared Resource Core, VCU Massey Cancer Center, Virginia Commonwealth University, Richmond, VA 23284, USA, 3Division of Biomedical Statistics and Informatics and 4Division of Epidemiology, Department of Health Sciences Research, Mayo Clinic, Rochester, MN 55905, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Biostatistics, 2Biostatistics Shared Resource Core, VCU Massey Cancer Center, Virginia Commonwealth University, Richmond, VA 23284, USA, 3Division of Biomedical Statistics and Informatics and 4Division of Epidemiology, Department of Health Sciences Research, Mayo Clinic, Rochester, MN 55905, USA","institution_ids":["https://openalex.org/I184840846","https://openalex.org/I1330342723"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065185741","display_name":"Celine M. Vachon","orcid":"https://orcid.org/0000-0002-1962-9322"},"institutions":[{"id":"https://openalex.org/I184840846","display_name":"Virginia Commonwealth University","ror":"https://ror.org/02nkdxk79","country_code":"US","type":"education","lineage":["https://openalex.org/I184840846"]},{"id":"https://openalex.org/I1330342723","display_name":"Mayo Clinic","ror":"https://ror.org/02qp3tb03","country_code":"US","type":"funder","lineage":["https://openalex.org/I1330342723"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Celine M. Vachon","raw_affiliation_strings":["1 Department of Biostatistics, 2Biostatistics Shared Resource Core, VCU Massey Cancer Center, Virginia Commonwealth University, Richmond, VA 23284, USA, 3Division of Biomedical Statistics and Informatics and 4Division of Epidemiology, Department of Health Sciences Research, Mayo Clinic, Rochester, MN 55905, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Biostatistics, 2Biostatistics Shared Resource Core, VCU Massey Cancer Center, Virginia Commonwealth University, Richmond, VA 23284, USA, 3Division of Biomedical Statistics and Informatics and 4Division of Epidemiology, Department of Health Sciences Research, Mayo Clinic, Rochester, MN 55905, USA","institution_ids":["https://openalex.org/I184840846","https://openalex.org/I1330342723"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038946006","display_name":"Mariza de Andrade","orcid":"https://orcid.org/0000-0003-2329-2686"},"institutions":[{"id":"https://openalex.org/I184840846","display_name":"Virginia Commonwealth University","ror":"https://ror.org/02nkdxk79","country_code":"US","type":"education","lineage":["https://openalex.org/I184840846"]},{"id":"https://openalex.org/I1330342723","display_name":"Mayo Clinic","ror":"https://ror.org/02qp3tb03","country_code":"US","type":"funder","lineage":["https://openalex.org/I1330342723"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mariza de Andrade","raw_affiliation_strings":["1 Department of Biostatistics, 2Biostatistics Shared Resource Core, VCU Massey Cancer Center, Virginia Commonwealth University, Richmond, VA 23284, USA, 3Division of Biomedical Statistics and Informatics and 4Division of Epidemiology, Department of Health Sciences Research, Mayo Clinic, Rochester, MN 55905, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Biostatistics, 2Biostatistics Shared Resource Core, VCU Massey Cancer Center, Virginia Commonwealth University, Richmond, VA 23284, USA, 3Division of Biomedical Statistics and Informatics and 4Division of Epidemiology, Department of Health Sciences Research, Mayo Clinic, Rochester, MN 55905, USA","institution_ids":["https://openalex.org/I184840846","https://openalex.org/I1330342723"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071782757","display_name":"Jean\u2010Pierre Kocher","orcid":"https://orcid.org/0000-0002-0260-6773"},"institutions":[{"id":"https://openalex.org/I184840846","display_name":"Virginia Commonwealth University","ror":"https://ror.org/02nkdxk79","country_code":"US","type":"education","lineage":["https://openalex.org/I184840846"]},{"id":"https://openalex.org/I1330342723","display_name":"Mayo Clinic","ror":"https://ror.org/02qp3tb03","country_code":"US","type":"funder","lineage":["https://openalex.org/I1330342723"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jean-Pierre A. Kocher","raw_affiliation_strings":["1 Department of Biostatistics, 2Biostatistics Shared Resource Core, VCU Massey Cancer Center, Virginia Commonwealth University, Richmond, VA 23284, USA, 3Division of Biomedical Statistics and Informatics and 4Division of Epidemiology, Department of Health Sciences Research, Mayo Clinic, Rochester, MN 55905, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Biostatistics, 2Biostatistics Shared Resource Core, VCU Massey Cancer Center, Virginia Commonwealth University, Richmond, VA 23284, USA, 3Division of Biomedical Statistics and Informatics and 4Division of Epidemiology, Department of Health Sciences Research, Mayo Clinic, Rochester, MN 55905, USA","institution_ids":["https://openalex.org/I184840846","https://openalex.org/I1330342723"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5040994175","display_name":"Jeanette E. Eckel\u2010Passow","orcid":"https://orcid.org/0000-0002-6113-1114"},"institutions":[{"id":"https://openalex.org/I1330342723","display_name":"Mayo Clinic","ror":"https://ror.org/02qp3tb03","country_code":"US","type":"funder","lineage":["https://openalex.org/I1330342723"]},{"id":"https://openalex.org/I184840846","display_name":"Virginia Commonwealth University","ror":"https://ror.org/02nkdxk79","country_code":"US","type":"education","lineage":["https://openalex.org/I184840846"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jeanette E. Eckel-Passow","raw_affiliation_strings":["1 Department of Biostatistics, 2Biostatistics Shared Resource Core, VCU Massey Cancer Center, Virginia Commonwealth University, Richmond, VA 23284, USA, 3Division of Biomedical Statistics and Informatics and 4Division of Epidemiology, Department of Health Sciences Research, Mayo Clinic, Rochester, MN 55905, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Biostatistics, 2Biostatistics Shared Resource Core, VCU Massey Cancer Center, Virginia Commonwealth University, Richmond, VA 23284, USA, 3Division of Biomedical Statistics and Informatics and 4Division of Epidemiology, Department of Health Sciences Research, Mayo Clinic, Rochester, MN 55905, USA","institution_ids":["https://openalex.org/I184840846","https://openalex.org/I1330342723"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5020349673"],"corresponding_institution_ids":["https://openalex.org/I1330342723","https://openalex.org/I184840846"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":2.5454,"has_fulltext":true,"cited_by_count":150,"citation_normalized_percentile":{"value":0.89792802,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":98,"max":100},"biblio":{"volume":"29","issue":"22","first_page":"2877","last_page":"2883"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10594","display_name":"Genetic and phenotypic traits in livestock","score":0.9740999937057495,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.954800009727478,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/principal-component-analysis","display_name":"Principal component analysis","score":0.831807017326355},{"id":"https://openalex.org/keywords/statistic","display_name":"Statistic","score":0.7639508247375488},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6568042039871216},{"id":"https://openalex.org/keywords/component","display_name":"Component (thermodynamics)","score":0.5905571579933167},{"id":"https://openalex.org/keywords/throughput","display_name":"Throughput","score":0.5758731365203857},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3910718262195587},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.34992942214012146},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.20848283171653748},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.16848036646842957}],"concepts":[{"id":"https://openalex.org/C27438332","wikidata":"https://www.wikidata.org/wiki/Q2873","display_name":"Principal component analysis","level":2,"score":0.831807017326355},{"id":"https://openalex.org/C89128539","wikidata":"https://www.wikidata.org/wiki/Q1949963","display_name":"Statistic","level":2,"score":0.7639508247375488},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6568042039871216},{"id":"https://openalex.org/C168167062","wikidata":"https://www.wikidata.org/wiki/Q1117970","display_name":"Component (thermodynamics)","level":2,"score":0.5905571579933167},{"id":"https://openalex.org/C157764524","wikidata":"https://www.wikidata.org/wiki/Q1383412","display_name":"Throughput","level":3,"score":0.5758731365203857},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3910718262195587},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.34992942214012146},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.20848283171653748},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.16848036646842957},{"id":"https://openalex.org/C76155785","wikidata":"https://www.wikidata.org/wiki/Q418","display_name":"Telecommunications","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C555944384","wikidata":"https://www.wikidata.org/wiki/Q249","display_name":"Wireless","level":2,"score":0.0},{"id":"https://openalex.org/C97355855","wikidata":"https://www.wikidata.org/wiki/Q11473","display_name":"Thermodynamics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D003627","descriptor_name":"Data Interpretation, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003627","descriptor_name":"Data Interpretation, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003627","descriptor_name":"Data Interpretation, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003627","descriptor_name":"Data Interpretation, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D025341","descriptor_name":"Principal Component Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D025341","descriptor_name":"Principal Component Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D025341","descriptor_name":"Principal Component Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D025341","descriptor_name":"Principal Component Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D056915","descriptor_name":"DNA Copy Number Variations","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056915","descriptor_name":"DNA Copy Number Variations","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056915","descriptor_name":"DNA Copy Number Variations","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056915","descriptor_name":"DNA Copy Number Variations","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btt480","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btt480","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/29/22/2877/17099626/btt480.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:23958724","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/23958724","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.917.2633","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.917.2633","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://bioinformatics.oxfordjournals.org/content/early/2013/08/19/bioinformatics.btt480.full.pdf","raw_type":"text"},{"id":"pmh:oai:pubmedcentral.nih.gov:3810845","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3810845","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btt480","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btt480","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/29/22/2877/17099626/btt480.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2517150747","display_name":null,"funder_award_id":"CA140286","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G263768942","display_name":null,"funder_award_id":"CA128931","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G5776533136","display_name":null,"funder_award_id":"R01 CA128931","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320333659","display_name":"Center for Individualized Medicine, Mayo Clinic","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2118521406.pdf","grobid_xml":"https://content.openalex.org/works/W2118521406.grobid-xml"},"referenced_works_count":30,"referenced_works":["https://openalex.org/W1480595150","https://openalex.org/W1488639150","https://openalex.org/W1555148682","https://openalex.org/W1966701961","https://openalex.org/W1986849266","https://openalex.org/W1996353320","https://openalex.org/W1998894275","https://openalex.org/W2003170555","https://openalex.org/W2007527993","https://openalex.org/W2024103316","https://openalex.org/W2029555993","https://openalex.org/W2049446938","https://openalex.org/W2050886653","https://openalex.org/W2054294074","https://openalex.org/W2107665951","https://openalex.org/W2108947463","https://openalex.org/W2110065044","https://openalex.org/W2112440119","https://openalex.org/W2113878188","https://openalex.org/W2127824649","https://openalex.org/W2137499573","https://openalex.org/W2138756513","https://openalex.org/W2139345901","https://openalex.org/W2143290174","https://openalex.org/W2147013674","https://openalex.org/W2150542002","https://openalex.org/W2160231971","https://openalex.org/W2169353806","https://openalex.org/W4210275735","https://openalex.org/W4298870207"],"related_works":["https://openalex.org/W1975632186","https://openalex.org/W3027745756","https://openalex.org/W3205213561","https://openalex.org/W2531880140","https://openalex.org/W2036609560","https://openalex.org/W346861917","https://openalex.org/W3024018414","https://openalex.org/W2126145365","https://openalex.org/W4380081032","https://openalex.org/W1542592062"],"abstract_inverted_index":{"reesese@vcu.edu":[0]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":11},{"year":2024,"cited_by_count":18},{"year":2023,"cited_by_count":16},{"year":2022,"cited_by_count":11},{"year":2021,"cited_by_count":15},{"year":2020,"cited_by_count":17},{"year":2019,"cited_by_count":14},{"year":2018,"cited_by_count":19},{"year":2017,"cited_by_count":9},{"year":2016,"cited_by_count":7},{"year":2015,"cited_by_count":5},{"year":2014,"cited_by_count":5}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
